Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0423800-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:15019919:15021149:-1 gene:Os10g0423800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BTB/POZ domain containing protein. (Os10t0423800-00)
Sequence

ATGCCGACACCCGAGCCCTCGACCTCCGCCTCCGCCATCGTCTCCGGCACGGTGACAGGG
CACCACGTGCTCACCATCGACGGCTACTCCCGCACCAAGGCGAAGCTCCCCACCGGCCGG
TTCACCGCGTCTCGCCCTTTCACGGTGGGAGGACACTCCTGGAGCATCCACTACTACCCC
AGCGGCGATCGCTCCGACACCGCCGGCTTCATATCCGTCTTCCTCGAGCTCAACCCCGCC
GCCGACGCCGCCGCCGCCGCCGGCAGCGGCGGCTCCGAGCCCGTCGACGCGCGTGTCACG
TTCAGCTTGCTGGATCAGGCCGGGAGGTCCGTGCCGTCCCACACCATGGCCACGGATCTG
CACGACTTCGCCGCCACCGGCTTCGGCTTCGGTCGATTCATCGAGAGGTCGTACCTGGAG
CAGTCGGAGCATCTCAAGAACGATCGGTTCGCCATCCGGTGCGACGTCGTCGTCTTCTCC
GACGAGCTCCGTGCGGAGGCCCGCACCGCTGACGCCGCAGCTCTTTCCGTCGCGGTGCCG
CCGTCGGACCTGAGCCAGCATCTCGGCGGCCTCCTCGCGGCCAAGGAACTAGGCGCCGAC
GTCACGTTCCTGGTCGCCGGCGAGACGTTCACGGCGCACAGGTGCGTTCTCGCGGCCCGG
TCGCCGGTGTTCAGGGCAGAGCTCTTCGGCCCGATGAAAGAGAGCGCCGCCACGGCGGTC
ATCACCGTCGACGACATCGAGCCAGACGTGTTCAGGAACCTGCTCACCTTCATGTACACC
GACACGTTGCCAGAGACAAATCCACAAGAGCTGGAGGAAGAAGAAGAAGACGACGACGAC
GACTACGAGGACGATCAAGCTCAAGCTGCTGCAATGGTCGAGCATCTGCTCATCGCGGCG
GACAGGTACAACCTGGAGAGGCTGAAGCTGATCTGCGAGGATAGGCTGTGCAAGCACATC
GACGGCGAGTCCGTGGCGACGATCTTGGCCTTGGCTGAGCAGCACAGCTGCGATGGGTTG
AAGGAGGCGTGCTTCCAGTTCCTCAGCTCGCGATCGGCTCTGAATTCTCTGGTGGCCACC
GATGGCATTGAGCATCTAGCTAGATGGTGCCCCTCTGTTCTCAACCAGCTCATGTCCAAG
GTTGCTGCTCTTGTTCCTGTTGATTTCGTCGTCAGGGAAACAAGATAA

Peptide Sequence

PEP ID

Os10t0423800-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:15019919:15021149:-1 gene:Os10g0423800 transcript:Os10t0423800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BTB/POZ domain containing protein. (Os10t0423800-00)
Sequence

MPTPEPSTSASAIVSGTVTGHHVLTIDGYSRTKAKLPTGRFTASRPFTVGGHSWSIHYYP
SGDRSDTAGFISVFLELNPAADAAAAAGSGGSEPVDARVTFSLLDQAGRSVPSHTMATDL
HDFAATGFGFGRFIERSYLEQSEHLKNDRFAIRCDVVVFSDELRAEARTADAAALSVAVP
PSDLSQHLGGLLAAKELGADVTFLVAGETFTAHRCVLAARSPVFRAELFGPMKESAATAV
ITVDDIEPDVFRNLLTFMYTDTLPETNPQELEEEEEDDDDDYEDDQAQAAAMVEHLLIAA
DRYNLERLKLICEDRLCKHIDGESVATILALAEQHSCDGLKEACFQFLSSRSALNSLVAT
DGIEHLARWCPSVLNQLMSKVAALVPVDFVVRETR

Transcript Sequence

Transcript ID

Os10t0423800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:15019919:15021149:-1 gene:Os10g0423800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BTB/POZ domain containing protein. (Os10t0423800-00)
Sequence

CAAACCCATCATCTCCTTCGCGCCGTCGTCGACCACCATCACCATGCCGACACCCGAGCC
CTCGACCTCCGCCTCCGCCATCGTCTCCGGCACGGTGACAGGGCACCACGTGCTCACCAT
CGACGGCTACTCCCGCACCAAGGCGAAGCTCCCCACCGGCCGGTTCACCGCGTCTCGCCC
TTTCACGGTGGGAGGACACTCCTGGAGCATCCACTACTACCCCAGCGGCGATCGCTCCGA
CACCGCCGGCTTCATATCCGTCTTCCTCGAGCTCAACCCCGCCGCCGACGCCGCCGCCGC
CGCCGGCAGCGGCGGCTCCGAGCCCGTCGACGCGCGTGTCACGTTCAGCTTGCTGGATCA
GGCCGGGAGGTCCGTGCCGTCCCACACCATGGCCACGGATCTGCACGACTTCGCCGCCAC
CGGCTTCGGCTTCGGTCGATTCATCGAGAGGTCGTACCTGGAGCAGTCGGAGCATCTCAA
GAACGATCGGTTCGCCATCCGGTGCGACGTCGTCGTCTTCTCCGACGAGCTCCGTGCGGA
GGCCCGCACCGCTGACGCCGCAGCTCTTTCCGTCGCGGTGCCGCCGTCGGACCTGAGCCA
GCATCTCGGCGGCCTCCTCGCGGCCAAGGAACTAGGCGCCGACGTCACGTTCCTGGTCGC
CGGCGAGACGTTCACGGCGCACAGGTGCGTTCTCGCGGCCCGGTCGCCGGTGTTCAGGGC
AGAGCTCTTCGGCCCGATGAAAGAGAGCGCCGCCACGGCGGTCATCACCGTCGACGACAT
CGAGCCAGACGTGTTCAGGAACCTGCTCACCTTCATGTACACCGACACGTTGCCAGAGAC
AAATCCACAAGAGCTGGAGGAAGAAGAAGAAGACGACGACGACGACTACGAGGACGATCA
AGCTCAAGCTGCTGCAATGGTCGAGCATCTGCTCATCGCGGCGGACAGGTACAACCTGGA
GAGGCTGAAGCTGATCTGCGAGGATAGGCTGTGCAAGCACATCGACGGCGAGTCCGTGGC
GACGATCTTGGCCTTGGCTGAGCAGCACAGCTGCGATGGGTTGAAGGAGGCGTGCTTCCA
GTTCCTCAGCTCGCGATCGGCTCTGAATTCTCTGGTGGCCACCGATGGCATTGAGCATCT
AGCTAGATGGTGCCCCTCTGTTCTCAACCAGCTCATGTCCAAGGTTGCTGCTCTTGTTCC
TGTTGATTTCGTCGTCAGGGAAACAAGATAA