Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0422566-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:14956178:14959713:-1 gene:Os10g0422566 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0422566-01)
Sequence

ATGCTTCGTGTTGGGAGAATTTGTTCAAGATCTTCAACCCGTGCTGTTTCTTCATTCCTG
GTGGGTCCAAGACATTTGATTGGTCATGAAAGCCCACATTTCTTGGGCTCCAAGTGTTGT
TGGACTAACCGGACTGGTGCAATTGGGTTCCTGAACACAAAGCTAAATATTGGTAGTTAT
GGTCCATGCTTATCAACTCTTACTGAAACAATTCTGGTCCAAGCTCATGACCCATCCCTG
CTAGCATTGGAGATAGAGAATGCAATTGATCAGCAGAGGTTTGATGATGCATGGAGGGCT
TATGAGAAGCATATTCACATGGATGGAGTCCCCAGAAAGTCTGTTTTGAGTAAGCTCATC
ACTGGCTTCGCAGAGACCTGTGATGCTCACTGGCTGAACCAGTCCTACAATGTGGTTAAT
CATGCATTTGAAGAGAAGAGCAAACTGTTGGAGAAGGAGCCCCTTATTTTCCTCTCTCTT
GCACTCGCACGGTCTTCTCTTCCTAATCTTTCTATAAATGTTGTGAGGAAGTTGATAAAG
ATGGAAGCATACCCACCTGTTGCAGCATGGTCGGCTATCGTGGCGCATATGTGCCAAACT
GCAACTGGTGCATTTCTTGCTGCTGACATGGTAATGGAGATTGGCTACCTTTTCCAGAAT
AATAGGGTTGATCCACGGAAGAAGAGCAACCGTCCATTGCTATTAATGAAGCCCAATTCA
TTGACCTTCAACATAATTCTGACTGCATCCCTTCTGTTTGGCACTACAAAAAAGGCGGAG
CAGCTTCTTGAATTAATGCCTAGGATAGGGTTGAAGCCTGACGTCAGCTCGTTGATTGTT
ATGGCCCGGATATATGAACAGAATGGGCACAGAGATGAGATCCAGAAGCTGAGGAGACAT
GTTAATGAGGCCTGTGGCCTTAGTGAATCAGAGCTCAGGCAGTTTTATGATTGCTTGCTC
TCCTGCCACTTGAAATTTGGAGATCTGGATTCTGCAGTGGATATGATATTGGATATGCTT
AAAAAGGGTAAAAATACGAAACGTTCACTTGAAGCAGCTAAAGCAGTTCTTGAAGCAGTT
GAAAACAACAAAATTTATCTTCCTTATGAGAAAACCAAGCCTGTTAATTCAGGTTCCTCG
AACAAATCTGTATGTACTGACAGTCAAATGCTAAACTATATTTCATTCTTCAAAGATAAG
AGCTTTGCAAGGCTTGAGTTAGATGCGAGAGAATTACTCAAGCTATTATCAGATAAGCTT
CAGGAACAAGTTGGGCTAGTAAAATCTGAATATGGTATCCTCTATCCAACTGAAACAATG
TATGCCAAGCTTGTTAAAGCTTTTCTGGAAGCAAACAAGATCAGTGCATTGGCATCATTT
CTTGTGAAAGCAAGCAAAGAGGATTCTCCTGTCTCTGTTGAAAGCTCCTTTGTTGTTCAA
GTGATAAATGCATGTATTTCTCTTGGGTGGTTAGAGCAAGCACATGACCTTCTTGACGAG
ATGAGATTTTCTGGAATTAGAGTTGGTTCTACCATTTATTCATCTCTCCTAAAGGCATAT
TGCAAAGAGGGCCATCATGAAGATGACATAGCTGCACTTCTGAAAGACGCTCAACAAGCA
GGTATTCAGCTTGATCCAAGCTGCTATGAGGATTTGATACAATCCAGAGCACATCACAAT
AATACCACAGGTGCTCTCAATCTTTTTAAAGAGTTGAAGAGTTTGAATATTTTGAAAGCT
GGTCAGAATGAATTTGAGATGTTAGTACAAGGCTGCAATAACAATGGAGCTGCTTTGACA
ACTAAGCTAGTGGAGGAAGTCAGAAGTGGCCACCCGGTTAATCATGCTATTCATGACTGG
AATAATGTTATCCATTTCTTCTGCAAGAAGAGATTGATGCATGATGCTCACAAAGCACTT
GGCAAGATGAAAGCTTTAGGACACACGCCAAATGCACAGACATTCCATTCTTTAGTAACT
GGTTATGCTGCTGTTGGTGGTAAATATGTAGAGGTGACAGATTTGTGGGGTGAAATGAAA
GTTTTGGCCACCTCAAGTTCAATGAATTTTGATCAAGAGCTCCTGGACTCTCTGCTGTAT
TGCTTTGTGAGAGGCGGTTTCTTCCTTCGAGCCATGGAAGTTATAGAAATGATGGAAAAA
GGCAAGATGTTTATAGACAAATACAAGTACAAGTCCCTGTGGCTTAAATACCACAGAACA
TTGTACAAAGGTAAGGCTCCTAAAGTGCAAACAGAAGCACAACTGAAACGGAGGGAAGCA
GCATTGCATTTCAAGAGATGGATTGGATTAACATGA

Peptide Sequence

PEP ID

Os10t0422566-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:14956178:14959713:-1 gene:Os10g0422566 transcript:Os10t0422566-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0422566-01)
Sequence

MLRVGRICSRSSTRAVSSFLVGPRHLIGHESPHFLGSKCCWTNRTGAIGFLNTKLNIGSY
GPCLSTLTETILVQAHDPSLLALEIENAIDQQRFDDAWRAYEKHIHMDGVPRKSVLSKLI
TGFAETCDAHWLNQSYNVVNHAFEEKSKLLEKEPLIFLSLALARSSLPNLSINVVRKLIK
MEAYPPVAAWSAIVAHMCQTATGAFLAADMVMEIGYLFQNNRVDPRKKSNRPLLLMKPNS
LTFNIILTASLLFGTTKKAEQLLELMPRIGLKPDVSSLIVMARIYEQNGHRDEIQKLRRH
VNEACGLSESELRQFYDCLLSCHLKFGDLDSAVDMILDMLKKGKNTKRSLEAAKAVLEAV
ENNKIYLPYEKTKPVNSGSSNKSVCTDSQMLNYISFFKDKSFARLELDARELLKLLSDKL
QEQVGLVKSEYGILYPTETMYAKLVKAFLEANKISALASFLVKASKEDSPVSVESSFVVQ
VINACISLGWLEQAHDLLDEMRFSGIRVGSTIYSSLLKAYCKEGHHEDDIAALLKDAQQA
GIQLDPSCYEDLIQSRAHHNNTTGALNLFKELKSLNILKAGQNEFEMLVQGCNNNGAALT
TKLVEEVRSGHPVNHAIHDWNNVIHFFCKKRLMHDAHKALGKMKALGHTPNAQTFHSLVT
GYAAVGGKYVEVTDLWGEMKVLATSSSMNFDQELLDSLLYCFVRGGFFLRAMEVIEMMEK
GKMFIDKYKYKSLWLKYHRTLYKGKAPKVQTEAQLKRREAALHFKRWIGLT

Transcript Sequence

Transcript ID

Os10t0422566-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:14956178:14959713:-1 gene:Os10g0422566 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os10t0422566-01)
Sequence

CGTGGCAGGGTGAAGGCTGCAGCCTGCCGGCCCTCGCTTGCCCCCACTGGGCGCCGGCCG
AGCGCCACCCTGCGCGGGCACCTAGCCTGTGCTTGCCCCCTACTCGCAAATGCTTCGTGT
TGGGAGAATTTGTTCAAGATCTTCAACCCGTGCTGTTTCTTCATTCCTGGTGGGTCCAAG
ACATTTGATTGGTCATGAAAGCCCACATTTCTTGGGCTCCAAGTGTTGTTGGACTAACCG
GACTGGTGCAATTGGGTTCCTGAACACAAAGCTAAATATTGGTAGTTATGGTCCATGCTT
ATCAACTCTTACTGAAACAATTCTGGTCCAAGCTCATGACCCATCCCTGCTAGCATTGGA
GATAGAGAATGCAATTGATCAGCAGAGGTTTGATGATGCATGGAGGGCTTATGAGAAGCA
TATTCACATGGATGGAGTCCCCAGAAAGTCTGTTTTGAGTAAGCTCATCACTGGCTTCGC
AGAGACCTGTGATGCTCACTGGCTGAACCAGTCCTACAATGTGGTTAATCATGCATTTGA
AGAGAAGAGCAAACTGTTGGAGAAGGAGCCCCTTATTTTCCTCTCTCTTGCACTCGCACG
GTCTTCTCTTCCTAATCTTTCTATAAATGTTGTGAGGAAGTTGATAAAGATGGAAGCATA
CCCACCTGTTGCAGCATGGTCGGCTATCGTGGCGCATATGTGCCAAACTGCAACTGGTGC
ATTTCTTGCTGCTGACATGGTAATGGAGATTGGCTACCTTTTCCAGAATAATAGGGTTGA
TCCACGGAAGAAGAGCAACCGTCCATTGCTATTAATGAAGCCCAATTCATTGACCTTCAA
CATAATTCTGACTGCATCCCTTCTGTTTGGCACTACAAAAAAGGCGGAGCAGCTTCTTGA
ATTAATGCCTAGGATAGGGTTGAAGCCTGACGTCAGCTCGTTGATTGTTATGGCCCGGAT
ATATGAACAGAATGGGCACAGAGATGAGATCCAGAAGCTGAGGAGACATGTTAATGAGGC
CTGTGGCCTTAGTGAATCAGAGCTCAGGCAGTTTTATGATTGCTTGCTCTCCTGCCACTT
GAAATTTGGAGATCTGGATTCTGCAGTGGATATGATATTGGATATGCTTAAAAAGGGTAA
AAATACGAAACGTTCACTTGAAGCAGCTAAAGCAGTTCTTGAAGCAGTTGAAAACAACAA
AATTTATCTTCCTTATGAGAAAACCAAGCCTGTTAATTCAGGTTCCTCGAACAAATCTGT
ATGTACTGACAGTCAAATGCTAAACTATATTTCATTCTTCAAAGATAAGAGCTTTGCAAG
GCTTGAGTTAGATGCGAGAGAATTACTCAAGCTATTATCAGATAAGCTTCAGGAACAAGT
TGGGCTAGTAAAATCTGAATATGGTATCCTCTATCCAACTGAAACAATGTATGCCAAGCT
TGTTAAAGCTTTTCTGGAAGCAAACAAGATCAGTGCATTGGCATCATTTCTTGTGAAAGC
AAGCAAAGAGGATTCTCCTGTCTCTGTTGAAAGCTCCTTTGTTGTTCAAGTGATAAATGC
ATGTATTTCTCTTGGGTGGTTAGAGCAAGCACATGACCTTCTTGACGAGATGAGATTTTC
TGGAATTAGAGTTGGTTCTACCATTTATTCATCTCTCCTAAAGGCATATTGCAAAGAGGG
CCATCATGAAGATGACATAGCTGCACTTCTGAAAGACGCTCAACAAGCAGGTATTCAGCT
TGATCCAAGCTGCTATGAGGATTTGATACAATCCAGAGCACATCACAATAATACCACAGG
TGCTCTCAATCTTTTTAAAGAGTTGAAGAGTTTGAATATTTTGAAAGCTGGTCAGAATGA
ATTTGAGATGTTAGTACAAGGCTGCAATAACAATGGAGCTGCTTTGACAACTAAGCTAGT
GGAGGAAGTCAGAAGTGGCCACCCGGTTAATCATGCTATTCATGACTGGAATAATGTTAT
CCATTTCTTCTGCAAGAAGAGATTGATGCATGATGCTCACAAAGCACTTGGCAAGATGAA
AGCTTTAGGACACACGCCAAATGCACAGACATTCCATTCTTTAGTAACTGGTTATGCTGC
TGTTGGTGGTAAATATGTAGAGGTGACAGATTTGTGGGGTGAAATGAAAGTTTTGGCCAC
CTCAAGTTCAATGAATTTTGATCAAGAGCTCCTGGACTCTCTGCTGTATTGCTTTGTGAG
AGGCGGTTTCTTCCTTCGAGCCATGGAAGTTATAGAAATGATGGAAAAAGGCAAGATGTT
TATAGACAAATACAAGTACAAGTCCCTGTGGCTTAAATACCACAGAACATTGTACAAAGG
TAAGGCTCCTAAAGTGCAAACAGAAGCACAACTGAAACGGAGGGAAGCAGCATTGCATTT
CAAGAGATGGATTGGATTAACATGAAAACTACAGAGCACAGGTCCTTGAAAACACTAAGC
CTGGTAGATAGCTCTGCTGCTTTTGTTCACTGTATGTCATAGGAGATGTTCTGGTATCAG
CATGGTTTGCTACCACTGTATGGATGGACACCACTGTATGGAAACCTCTGGTAATAAAAT
CTTACATAACAAGGATTGGTAGTATTAA