Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0422075-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:14907909:14911829:-1 gene:Os10g0422075 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viral A-type inclusion protein repeat containing protein, expressed. (Os10t0422075-00)
Sequence	GGAAGTGAGGTCTTAATTATTGTTTGGAGTTTTGCTTTTGTGGCACCAATGGCGGCCTTG GTCGGTCATGACGCGAGGCAGTATTCATGGTGGTGGGTTAGTCATATCAGCCCCAAGAAC TCCAAATGGCTCCAAGAAAATCTCAATGACATGGATTCAAAGGTTAAAGCTATGATCAAA CTTCTCAATGAAGATGCTGATTCTTTTGCACGAAGAGCAGAGATGTACTACAAGAAACGC CCAGAGCTAATGAAACTGGTGGAGGAGTTCTACCGAGCTTACCGTGCATTGGCAGAAAGG TATGATCAGGCCACCGGTGCACTTCGACAGGCCCATAAATCAATTTCTGAAGCATTTCCC AATCAGATGCCACCAATGTCTGATGAGTCACCCGCTTCTTCGGGCCAAGAAGTGGAACCA CATACTCCAGACCTGCCCACTTTCACCCGTCTCCCTTTTGATTTGGATGACCTGCAGAAG GATGGAGTAGGTGTGTCACCACAACAATTCACCTCCAAGAGGAATGGTACACACCCTGAG GAAGCCAGTGCACTGCCAAATCGAAAAGGTTTTGATGTGAAAGTGCGTAAAGGCCTAAGC TTTGGAAGCCCAGAAGTTAAAGGCAGTGATGCCATCAGCAATGAGATGGTAAATTTGCAA CAAGAGATTTCAAGATTATTAGCTGAGAGCAACAGCATGAAACAACAGATATTATCAGAA TCTGAGAGGGCAAACAAAGCTGAAAATGAAATCCAGGTTCTAAAGGATACCATCTTGAAA TTGAATTCTGACAAAGACACGTCTCTGCTGCAATATAATCAGTCCACTGAGCGGTTATCT ACTCTGGAGTCTGAGCTCTCTAAGGCCCAGGATGACCTCAAGAAGCTAACTGATGAAATG GCTACAGAAGTTCAGAAGCTGAGTAGCGCTGAAGCACGCAATAGTGAAATACAGTCTGAG CTTGAGGCTTTGGATCAAAAGGTGAAGATGCAGCAAGAAGAACTTGAACAAAAGCAGAAA GAACTGAAAAGCTTCAACTTAACCTTCCAGGAAGAACAAGATAAGCGCATGCAGGCTGAA AGTGCTCTGCTTTCAGAGGGGAAAGAACTTGCTCAATGTCAAGAAGAAGTACAAAGGTTG ACTAAGGAAATCCAGATGGCAAATGAAAAGTTGAATGAGCTCAAGCAGACCAAAGTAAAT CTTGAGAATGCTGTTTCTGAGTTGAAGAAAGAAGTCGAGAATCTTACTGAACAAAACCGC TCCTCCGAGCTGCTTATACAAGAACTTCGCGATGAAATTAATTCTCTGAAGGATTCAAAG AACGAACTTCAAAATGAAATCCAAAGCCTTCGGAGCACCATTTCACAGTTAAACACCGAG AAGGATGCAACCCTATTTCAACACCAGCAGTCTGTTGAAAGAGTATCTGATCTGGAATCT CAACTCTTGAAGCTACAGCCTGAGCTGGAAGAAATTGAACAGAAGGTTCAGATGCTGATG CAAGATCTTGAACAGAAGAGACAGGAAGCAGATAGTGCCCATGCCCAGCTGCAAGATGAA TGCAATAGGCACACACAAACTGAAGCAGATCTTCACAGGTTTAAGAATCTGCATTCTCAG TTGGAAGAGGAAGTGATAAAGCTGACAGAAAATCTTGACAGATCAACAAAGGAACTGGAA GAGTTGGAAAATGCAAAGTTAGACCTGGAAAACACATCAAGAGAGTTAAAAAGCACAATC TTAGATTTAAACTCTGAGAAGGATGCAGTACTTCTGCAACAACAGCAATCTTTGGCGAAA ATATCTGAGTTGGAGCTACAGCTCTCTAAAACACAGTTGGAACTGAAGAATTCTGAACAG AAAATGCAGCTACTGGAGCTAGAAATCACACAGAAGAGTGAAAGTATGGACAGCCTGACG TTGAGCCTGAAAGACGAAACTGAGAAGAGGGTTCAAGCTGAAACATCACTCATGTCAATG GAGAGTATGTATTCTCAGTCTCAAGAGGAAGTGAATAGATTGCATCTAGAGATTGAGAAG CTTAATTTCAAATTGAATGAATTGGAAAACTTGTCATCTGAACTTAATAGCACCATCTTA CTTCTAAATGCCGAGAAAGATGCTACCGATCTTAAGAACCAGCAGTCCCTGGTGAGAATA TCTGATCTGGAGTCTGAACTCTCAAAGTTGCAGGCTCAACTGGAGAAAATTGAAGGGAAA GTACAGATGCTGGAGCAGGAACTCAAACATAAGAAAGAAGAAGTGGATAGTCTCCAAATC AGCATACAAGATGAAGCCCATAAGCGCAGTGAAGGTGAAGCAGCTCTCCTTGCAATGACG AATCTTAACTCTGAGTCTCAGGAGGAAGTGAATAGGTTGACCCTGGAAACTAAGAAGCTG AAAGTGAAGTTAAGTGAGGTGGAGAACAGTAATACAGATCTTGAGAATATCGTAGCCAAG CACACACAGGATATCCATGTCCTTCGTGAAAAGAATGTTTCCACTGAACTTATGATAAAA GAACTTCATCATGAGTTGGATGCCCTGAAGGAATTGAATGTGAAACTTGAGAGTGAAATG GGGTTACATATAGGCGAAAAGGAAGCACTTCAGAGAGACTTTGCTTGTCAAAAAGAAGAG AAGCAAAATCTAGAGGGGATACACCATTCTCTCGCTGAGGAAATGAGTACTTTAAAAAGC AGATCAGCAGCAAACCAGAAGTTGATTGAGGACTTGCAGATCATGAACTTAAAACTGAAG GAAGTGTGTGCGAAGAATGAGGTAGAAAAGGCACTTCTCTCAGAAAAGGTTCAAGAGGTG GAGAAGCTTTCTGAAGAATTTTCACTCATGGAGAACTCACTTTCAGATGCAAATGCTGAA ATGGATTCACTGAGGGAGAAGATTAAAGTGTTAGAAACTTCAGAAGGCTCTCTGAAGGAT GTAATTTCCTCTCACGTTTCTGAAAAGGCTATCCTTACATCAGATCTAGAAACTCTTGGT AAAAGTTATGCTGATATTTCAGAGAAAAATTCTAACTTGGATATCTTAATATCTGATATG AAAGCTGAGATTGAAAATTTGAGAACAAAGCTGACAGATTCTGAAGAAACCTGCCAGGCT CACCTTGCAAATAACTCAGCTCTTTCTGATGAAAAGAACAATGTGTTCTCTCAGGTAACT ACTGAAGTTCCTTCTGTAATAGAGATAAATTCTTGCTATGTTTCTTTTAAAACTTAA

Peptide Sequence

PEP ID	Os10t0422075-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:14907909:14911829:-1 gene:Os10g0422075 transcript:Os10t0422075-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viral A-type inclusion protein repeat containing protein, expressed. (Os10t0422075-00)
Sequence	GSEVLIIVWSFAFVAPMAALVGHDARQYSWWWVSHISPKNSKWLQENLNDMDSKVKAMIK LLNEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDQATGALRQAHKSISEAFP NQMPPMSDESPASSGQEVEPHTPDLPTFTRLPFDLDDLQKDGVGVSPQQFTSKRNGTHPE EASALPNRKGFDVKVRKGLSFGSPEVKGSDAISNEMVNLQQEISRLLAESNSMKQQILSE SERANKAENEIQVLKDTILKLNSDKDTSLLQYNQSTERLSTLESELSKAQDDLKKLTDEM ATEVQKLSSAEARNSEIQSELEALDQKVKMQQEELEQKQKELKSFNLTFQEEQDKRMQAE SALLSEGKELAQCQEEVQRLTKEIQMANEKLNELKQTKVNLENAVSELKKEVENLTEQNR SSELLIQELRDEINSLKDSKNELQNEIQSLRSTISQLNTEKDATLFQHQQSVERVSDLES QLLKLQPELEEIEQKVQMLMQDLEQKRQEADSAHAQLQDECNRHTQTEADLHRFKNLHSQ LEEEVIKLTENLDRSTKELEELENAKLDLENTSRELKSTILDLNSEKDAVLLQQQQSLAK ISELELQLSKTQLELKNSEQKMQLLELEITQKSESMDSLTLSLKDETEKRVQAETSLMSM ESMYSQSQEEVNRLHLEIEKLNFKLNELENLSSELNSTILLLNAEKDATDLKNQQSLVRI SDLESELSKLQAQLEKIEGKVQMLEQELKHKKEEVDSLQISIQDEAHKRSEGEAALLAMT NLNSESQEEVNRLTLETKKLKVKLSEVENSNTDLENIVAKHTQDIHVLREKNVSTELMIK ELHHELDALKELNVKLESEMGLHIGEKEALQRDFACQKEEKQNLEGIHHSLAEEMSTLKS RSAANQKLIEDLQIMNLKLKEVCAKNEVEKALLSEKVQEVEKLSEEFSLMENSLSDANAE MDSLREKIKVLETSEGSLKDVISSHVSEKAILTSDLETLGKSYADISEKNSNLDILISDM KAEIENLRTKLTDSEETCQAHLANNSALSDEKNNVFSQVTTEVPSVIEINSCYVSFKT

Transcript Sequence

Transcript ID	Os10t0422075-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14907909:14911829:-1 gene:Os10g0422075 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viral A-type inclusion protein repeat containing protein, expressed. (Os10t0422075-00)
Sequence	GGAAGTGAGGTCTTAATTATTGTTTGGAGTTTTGCTTTTGTGGCACCAATGGCGGCCTTG GTCGGTCATGACGCGAGGCAGTATTCATGGTGGTGGGTTAGTCATATCAGCCCCAAGAAC TCCAAATGGCTCCAAGAAAATCTCAATGACATGGATTCAAAGGTTAAAGCTATGATCAAA CTTCTCAATGAAGATGCTGATTCTTTTGCACGAAGAGCAGAGATGTACTACAAGAAACGC CCAGAGCTAATGAAACTGGTGGAGGAGTTCTACCGAGCTTACCGTGCATTGGCAGAAAGG TATGATCAGGCCACCGGTGCACTTCGACAGGCCCATAAATCAATTTCTGAAGCATTTCCC AATCAGATGCCACCAATGTCTGATGAGTCACCCGCTTCTTCGGGCCAAGAAGTGGAACCA CATACTCCAGACCTGCCCACTTTCACCCGTCTCCCTTTTGATTTGGATGACCTGCAGAAG GATGGAGTAGGTGTGTCACCACAACAATTCACCTCCAAGAGGAATGGTACACACCCTGAG GAAGCCAGTGCACTGCCAAATCGAAAAGGTTTTGATGTGAAAGTGCGTAAAGGCCTAAGC TTTGGAAGCCCAGAAGTTAAAGGCAGTGATGCCATCAGCAATGAGATGGTAAATTTGCAA CAAGAGATTTCAAGATTATTAGCTGAGAGCAACAGCATGAAACAACAGATATTATCAGAA TCTGAGAGGGCAAACAAAGCTGAAAATGAAATCCAGGTTCTAAAGGATACCATCTTGAAA TTGAATTCTGACAAAGACACGTCTCTGCTGCAATATAATCAGTCCACTGAGCGGTTATCT ACTCTGGAGTCTGAGCTCTCTAAGGCCCAGGATGACCTCAAGAAGCTAACTGATGAAATG GCTACAGAAGTTCAGAAGCTGAGTAGCGCTGAAGCACGCAATAGTGAAATACAGTCTGAG CTTGAGGCTTTGGATCAAAAGGTGAAGATGCAGCAAGAAGAACTTGAACAAAAGCAGAAA GAACTGAAAAGCTTCAACTTAACCTTCCAGGAAGAACAAGATAAGCGCATGCAGGCTGAA AGTGCTCTGCTTTCAGAGGGGAAAGAACTTGCTCAATGTCAAGAAGAAGTACAAAGGTTG ACTAAGGAAATCCAGATGGCAAATGAAAAGTTGAATGAGCTCAAGCAGACCAAAGTAAAT CTTGAGAATGCTGTTTCTGAGTTGAAGAAAGAAGTCGAGAATCTTACTGAACAAAACCGC TCCTCCGAGCTGCTTATACAAGAACTTCGCGATGAAATTAATTCTCTGAAGGATTCAAAG AACGAACTTCAAAATGAAATCCAAAGCCTTCGGAGCACCATTTCACAGTTAAACACCGAG AAGGATGCAACCCTATTTCAACACCAGCAGTCTGTTGAAAGAGTATCTGATCTGGAATCT CAACTCTTGAAGCTACAGCCTGAGCTGGAAGAAATTGAACAGAAGGTTCAGATGCTGATG CAAGATCTTGAACAGAAGAGACAGGAAGCAGATAGTGCCCATGCCCAGCTGCAAGATGAA TGCAATAGGCACACACAAACTGAAGCAGATCTTCACAGGTTTAAGAATCTGCATTCTCAG TTGGAAGAGGAAGTGATAAAGCTGACAGAAAATCTTGACAGATCAACAAAGGAACTGGAA GAGTTGGAAAATGCAAAGTTAGACCTGGAAAACACATCAAGAGAGTTAAAAAGCACAATC TTAGATTTAAACTCTGAGAAGGATGCAGTACTTCTGCAACAACAGCAATCTTTGGCGAAA ATATCTGAGTTGGAGCTACAGCTCTCTAAAACACAGTTGGAACTGAAGAATTCTGAACAG AAAATGCAGCTACTGGAGCTAGAAATCACACAGAAGAGTGAAAGTATGGACAGCCTGACG TTGAGCCTGAAAGACGAAACTGAGAAGAGGGTTCAAGCTGAAACATCACTCATGTCAATG GAGAGTATGTATTCTCAGTCTCAAGAGGAAGTGAATAGATTGCATCTAGAGATTGAGAAG CTTAATTTCAAATTGAATGAATTGGAAAACTTGTCATCTGAACTTAATAGCACCATCTTA CTTCTAAATGCCGAGAAAGATGCTACCGATCTTAAGAACCAGCAGTCCCTGGTGAGAATA TCTGATCTGGAGTCTGAACTCTCAAAGTTGCAGGCTCAACTGGAGAAAATTGAAGGGAAA GTACAGATGCTGGAGCAGGAACTCAAACATAAGAAAGAAGAAGTGGATAGTCTCCAAATC AGCATACAAGATGAAGCCCATAAGCGCAGTGAAGGTGAAGCAGCTCTCCTTGCAATGACG AATCTTAACTCTGAGTCTCAGGAGGAAGTGAATAGGTTGACCCTGGAAACTAAGAAGCTG AAAGTGAAGTTAAGTGAGGTGGAGAACAGTAATACAGATCTTGAGAATATCGTAGCCAAG CACACACAGGATATCCATGTCCTTCGTGAAAAGAATGTTTCCACTGAACTTATGATAAAA GAACTTCATCATGAGTTGGATGCCCTGAAGGAATTGAATGTGAAACTTGAGAGTGAAATG GGGTTACATATAGGCGAAAAGGAAGCACTTCAGAGAGACTTTGCTTGTCAAAAAGAAGAG AAGCAAAATCTAGAGGGGATACACCATTCTCTCGCTGAGGAAATGAGTACTTTAAAAAGC AGATCAGCAGCAAACCAGAAGTTGATTGAGGACTTGCAGATCATGAACTTAAAACTGAAG GAAGTGTGTGCGAAGAATGAGGTAGAAAAGGCACTTCTCTCAGAAAAGGTTCAAGAGGTG GAGAAGCTTTCTGAAGAATTTTCACTCATGGAGAACTCACTTTCAGATGCAAATGCTGAA ATGGATTCACTGAGGGAGAAGATTAAAGTGTTAGAAACTTCAGAAGGCTCTCTGAAGGAT GTAATTTCCTCTCACGTTTCTGAAAAGGCTATCCTTACATCAGATCTAGAAACTCTTGGT AAAAGTTATGCTGATATTTCAGAGAAAAATTCTAACTTGGATATCTTAATATCTGATATG AAAGCTGAGATTGAAAATTTGAGAACAAAGCTGACAGATTCTGAAGAAACCTGCCAGGCT CACCTTGCAAATAACTCAGCTCTTTCTGATGAAAAGAACAATGTGTTCTCTCAGGTAACT ACTGAAGTTCCTTCTGTAATAGAGATAAATTCTTGCTATGTTTCTTTTAAAACTTAA