Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0421800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14897744:14900931:-1 gene:Os10g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0421800-01)
Sequence	ACAGGGGAGTGGAGGGGAGGGCCGCCTATCTCCATCTGGCGAGCAGAGCAAGAGCAAGGG AGGGGATCCTGGTGTGGTGTTGTTGTTGTCGTTGTTGCTCGCCGGATGTTGGAGGTCTGC TGCTGCTCCGGCGTCCTCGGCGGGTCGCCGCCGTCGTCGAGGACTGCGGGGGTTTCCTCA CCTGGACTATCGCCGTCTCGGCCCAGTAAGCGGCGAATCGGCCGCGCCCGGGTGCAGCCG CGCGCGCCGCCGCCGTGCGACGAGCGGAGGGCGGCGGAGGACGTCATCCACGCGCTCAGG TCGGCGGATGGCCCCGCCGAGGCGCTTGAGCGGTTCAGGTCGGCGGCGCGGAAGCCCAGG GTGGCCCACACGACCGCGTCGTGCAACTACATGCTCGAGCTCATGCGCGGCCATGGCCGG GTCGGGGACATGGCCGAGGTGTTCGACGTAATGCAGAGGCAGATCGTCAAGGCGAACGTG GGCACGTTCGCGGCGATCTTCGGAGGGCTTGGTGTGGAGGGGGGACTCCGGAGCGCGCCG GTGGCGCTGCCGGTCATGAAGGAGGCCGGGATTGTCTTGAACGCGTACACGTATAATGGC CTGGTTTATTTCCTTGTGAAGTCCGGGTTTGATAGGGAGGCGTTGGAGGTTTATAGGGTG ATGATGGTGGATGGTGTTGTGCCTAGTGTGAGAACCTACTCTGTGCTGATGGTGGCGTTC GGGAAGAGGAGGGATGTCGAGACGGTTCTTTGGTTGTTGCGTGAAATGGAGGCTCATGGC GTGAAGCCGAATGTGTATAGCTACACCATCTGTATTCGAGTTCTTGGACAAGCCAAAAGA TTCGATGAAGCTTATCGGATACTTGCGAAAATGGAGAATGAAGGGTGTAAGCCGGATGTC ATTACCCATACCGTGCTTATACAGGTTCTTTGCGATGCTGGCCGTATCAGTGATGCCAAG GATGTTTTTTGGAAGATGAAGAAGAGTGATCAAAAACCTGATCGAGTGACCTACATTACT CTGTTAGATAAGTTTGGTGACAATGGTGACTCGCAATCAGTGATGGAAATCTGGAATGCA ATGAAAGCTGATGGGTACAATGACAATGTTGTTGCTTATACAGCAGTTATTGATGCATTG TGCCAAGTTGGGAGGGTCTTTGAAGCTTTGGAAATGTTTGATGAGATGAAACAAAAGGGT ATAGTGCCTGAGCAGTATTCATACAACTCGCTGATATCGGGGTTTCTTAAAGCTGATAGA TTTGGTGATGCCTTAGAGCTGTTTAAACATATGGATATTCATGGACCTAAACCAAATGGT TACACACATGTTCTTTTCATAAATTACTATGGAAAATCTGGTGAATCTATAAAGGCAATA CAGAGATATGAACTAATGAAGAGCAAAGGGATTGTGCCAGATGTTGTTGCTGGTAATGCT GTTTTGTTTGGTCTTGCCAAATCTGGTAGACTTGGCATGGCAAAAAGGGTATTTCATGAA TTAAAAGCTATGGGGGTTTCTCCGGATACTATCACCTACACTATGATGATCAAGTGTTGC AGCAAGGCATCAAAATTTGATGAAGCTGTGAAGATTTTCTATGATATGATTGAAAATAAT TGTGTTCCTGATGTTCTTGCCGTGAATTCTTTGATTGATACACTCTACAAGGCAGGCAGG GGTGATGAAGCCTGGCGGATCTTTTATCAACTAAAAGAAATGAATCTAGAGCCAACAGAT GGGACTTACAATACACTTTTGGCAGGATTGGGAAGGGAAGGTAAAGTCAAGGAGGTAATG CATCTGCTTGAAGAAATGTACCACAGTAATTATCCTCCTAATTTGATAACATACAATACG ATTCTTGACTGTCTCTGCAAGAACGGGGCAGTTAATGATGCACTTGATATGCTATACAGT ATGACTACGAAAGGATGCATACCTGATCTTTCGTCTTACAACACTGTTATATATGGCCTT GTTAAAGAAGAAAGATATAATGAGGCATTCAGTATTTTTTGTCAGATGAAGAAGGTTCTT ATTCCAGATTATGCAACACTGTGTACTATCCTCCCAAGTTTTGTGAAAATTGGACTGATG AAGGAAGCTCTGCATATTATCAAGGACTACTTCCTCCAACCTGGCTCCAAAACAGATAGG TCTTCATGCCATTCACTAATGGAAGGGATACTGAAGAAGGCTGGCATCGAAAAGTCAATT GAGTTTGCTGAAATCATAGCATCAAGTGGTATTACCTTGGATGATTTCTTTTTGTGCCCA TTAATTAAGCATCTCTGTAAGCAGAAGAAAGCTCTTGAAGCACATGAACTTGTCAAAAAG TTCAAGAGCTTTGGAGTTTCACTAAAAACTGGATTATATAATTCTTTGATTTGTGGGCTT GTTGATGAAAACCTAATAGATATTGCTGAAGGCTTGTTTGCTGAAATGAAGGAACTCGGT TGTGGTCCAGATGAGTTTACTTACAACTTACTTCTTGATGCCATGGGAAAGTCAATGCGG ATAGAGGAAATGCTAAAAGTTCAAGAAGAGATGCATCGCAAGGGATATGAATCAACTTAT GTTACTTATAACACAATCATTTCAGGTCTTGTAAAGTCAAGAAGGTTGGAGCAGGCTATT GATTTGTACTACAACCTGATGAGCCAAGGTTTCTCACCCACACCATGCACATATGGCCCT CTTCTTGATGGTCTGTTAAAAGCTGGAAGGATAGAAGATGCAGAAAATCTTTTCAATGAG ATGCTGGAGTATGGATGCAAGGCCAATTGCACTATCTACAATATACTACTGAATGGACAT CGAATAGCTGGTAATACAGAGAAGGTCTGTCATTTGTTTCAGGATATGGTTGACCAGGGA ATAAACCCAGATATAAAATCCTACACGATTATTATTGAC

Peptide Sequence

PEP ID	Os10t0421800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14897744:14900931:-1 gene:Os10g0421800 transcript:Os10t0421800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0421800-01)
Sequence	TGEWRGGPPISIWRAEQEQGRGSWCGVVVVVVARRMLEVCCCSGVLGGSPPSSRTAGVSS PGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIHALRSADGPAEALERFRSAARKPR VAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAP VALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAF GKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDV ITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNA MKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNA VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM HLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGL VKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG INPDIKSYTIIID

Transcript Sequence

Transcript ID	Os10t0421800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14897744:14900931:-1 gene:Os10g0421800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0421800-01)
Sequence	AAAAAAAATATCTCCCGTCTCCACTCCACTCCTTGCGCCATCTCGCGGCTGAACAGGGGA GTGGAGGGGAGGGCCGCCTATCTCCATCTGGCGAGCAGAGCAAGAGCAAGGGAGGGGATC CTGGTGTGGTGTTGTTGTTGTCGTTGTTGCTCGCCGGATGTTGGAGGTCTGCTGCTGCTC CGGCGTCCTCGGCGGGTCGCCGCCGTCGTCGAGGACTGCGGGGGTTTCCTCACCTGGACT ATCGCCGTCTCGGCCCAGTAAGCGGCGAATCGGCCGCGCCCGGGTGCAGCCGCGCGCGCC GCCGCCGTGCGACGAGCGGAGGGCGGCGGAGGACGTCATCCACGCGCTCAGGTCGGCGGA TGGCCCCGCCGAGGCGCTTGAGCGGTTCAGGTCGGCGGCGCGGAAGCCCAGGGTGGCCCA CACGACCGCGTCGTGCAACTACATGCTCGAGCTCATGCGCGGCCATGGCCGGGTCGGGGA CATGGCCGAGGTGTTCGACGTAATGCAGAGGCAGATCGTCAAGGCGAACGTGGGCACGTT CGCGGCGATCTTCGGAGGGCTTGGTGTGGAGGGGGGACTCCGGAGCGCGCCGGTGGCGCT GCCGGTCATGAAGGAGGCCGGGATTGTCTTGAACGCGTACACGTATAATGGCCTGGTTTA TTTCCTTGTGAAGTCCGGGTTTGATAGGGAGGCGTTGGAGGTTTATAGGGTGATGATGGT GGATGGTGTTGTGCCTAGTGTGAGAACCTACTCTGTGCTGATGGTGGCGTTCGGGAAGAG GAGGGATGTCGAGACGGTTCTTTGGTTGTTGCGTGAAATGGAGGCTCATGGCGTGAAGCC GAATGTGTATAGCTACACCATCTGTATTCGAGTTCTTGGACAAGCCAAAAGATTCGATGA AGCTTATCGGATACTTGCGAAAATGGAGAATGAAGGGTGTAAGCCGGATGTCATTACCCA TACCGTGCTTATACAGGTTCTTTGCGATGCTGGCCGTATCAGTGATGCCAAGGATGTTTT TTGGAAGATGAAGAAGAGTGATCAAAAACCTGATCGAGTGACCTACATTACTCTGTTAGA TAAGTTTGGTGACAATGGTGACTCGCAATCAGTGATGGAAATCTGGAATGCAATGAAAGC TGATGGGTACAATGACAATGTTGTTGCTTATACAGCAGTTATTGATGCATTGTGCCAAGT TGGGAGGGTCTTTGAAGCTTTGGAAATGTTTGATGAGATGAAACAAAAGGGTATAGTGCC TGAGCAGTATTCATACAACTCGCTGATATCGGGGTTTCTTAAAGCTGATAGATTTGGTGA TGCCTTAGAGCTGTTTAAACATATGGATATTCATGGACCTAAACCAAATGGTTACACACA TGTTCTTTTCATAAATTACTATGGAAAATCTGGTGAATCTATAAAGGCAATACAGAGATA TGAACTAATGAAGAGCAAAGGGATTGTGCCAGATGTTGTTGCTGGTAATGCTGTTTTGTT TGGTCTTGCCAAATCTGGTAGACTTGGCATGGCAAAAAGGGTATTTCATGAATTAAAAGC TATGGGGGTTTCTCCGGATACTATCACCTACACTATGATGATCAAGTGTTGCAGCAAGGC ATCAAAATTTGATGAAGCTGTGAAGATTTTCTATGATATGATTGAAAATAATTGTGTTCC TGATGTTCTTGCCGTGAATTCTTTGATTGATACACTCTACAAGGCAGGCAGGGGTGATGA AGCCTGGCGGATCTTTTATCAACTAAAAGAAATGAATCTAGAGCCAACAGATGGGACTTA CAATACACTTTTGGCAGGATTGGGAAGGGAAGGTAAAGTCAAGGAGGTAATGCATCTGCT TGAAGAAATGTACCACAGTAATTATCCTCCTAATTTGATAACATACAATACGATTCTTGA CTGTCTCTGCAAGAACGGGGCAGTTAATGATGCACTTGATATGCTATACAGTATGACTAC GAAAGGATGCATACCTGATCTTTCGTCTTACAACACTGTTATATATGGCCTTGTTAAAGA AGAAAGATATAATGAGGCATTCAGTATTTTTTGTCAGATGAAGAAGGTTCTTATTCCAGA TTATGCAACACTGTGTACTATCCTCCCAAGTTTTGTGAAAATTGGACTGATGAAGGAAGC TCTGCATATTATCAAGGACTACTTCCTCCAACCTGGCTCCAAAACAGATAGGTCTTCATG CCATTCACTAATGGAAGGGATACTGAAGAAGGCTGGCATCGAAAAGTCAATTGAGTTTGC TGAAATCATAGCATCAAGTGGTATTACCTTGGATGATTTCTTTTTGTGCCCATTAATTAA GCATCTCTGTAAGCAGAAGAAAGCTCTTGAAGCACATGAACTTGTCAAAAAGTTCAAGAG CTTTGGAGTTTCACTAAAAACTGGATTATATAATTCTTTGATTTGTGGGCTTGTTGATGA AAACCTAATAGATATTGCTGAAGGCTTGTTTGCTGAAATGAAGGAACTCGGTTGTGGTCC AGATGAGTTTACTTACAACTTACTTCTTGATGCCATGGGAAAGTCAATGCGGATAGAGGA AATGCTAAAAGTTCAAGAAGAGATGCATCGCAAGGGATATGAATCAACTTATGTTACTTA TAACACAATCATTTCAGGTCTTGTAAAGTCAAGAAGGTTGGAGCAGGCTATTGATTTGTA CTACAACCTGATGAGCCAAGGTTTCTCACCCACACCATGCACATATGGCCCTCTTCTTGA TGGTCTGTTAAAAGCTGGAAGGATAGAAGATGCAGAAAATCTTTTCAATGAGATGCTGGA GTATGGATGCAAGGCCAATTGCACTATCTACAATATACTACTGAATGGACATCGAATAGC TGGTAATACAGAGAAGGTCTGTCATTTGTTTCAGGATATGGTTGACCAGGGAATAAACCC AGATATAAAATCCTACACGATTATTATTGAC