Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0420400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14798144:14800301:1 gene:Os10g0420400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SULPHATE TRANSPORTER 3;1 description:Similar to Sulfate transporter 3.1 (AST12) (AtST1). (Os10t0420400-01)
Sequence	TCGATCAAAGCTGATTTATTTATTTTTTGTAATAATCTGTTGTACATTCAGAGCAAGAGG AAGCCTAAGTGGTTCTTGCTATCAGCGATGGCGCCGTTGGCGTCGGTCATCGCCGGAAGC GTTCTGGTCTACCTCATCCACGGCGACCGCCATGGCATCCCGGTGATTGGGTACCTGAAG AAGGGGATAAACCCGCCGTCGGCGCGCGATCTCCTCCTGTCGTCGCCGCACACGATGGTC GCTCTCAGGACCGGGATCATCACCGGCATCATCGGCCTCGCCGAGGGAATCGCGATCGGG AGGAGCTTCGCAATGCTGAAGAGCTACAATGTCGACGGGAACAAGGAGATGATCGCCTTC GGGGCGATGAACATCGTCGGCTCCTGCACCTCCTGCTACCTCACAGCTGGCCCGTTCTCG AGGGCGGCGGTGAACCACAACGCCGGGTGCAAGACGCCGATGTCGAACGCGGTGATGGCG GTGGCCGTGATGCTGACGCTGCAGTTCCTGACGCCGCTCTTCCACTACACCCCGCTGGTG GTGCTCTCGGCGATCATCATCTCGGCGATGATCGGCATCATCGACTACAAGGCCGCCGTC CGGCTGTGGAAGGTTGACAAGATCGACTTCTGCGTCTGCGTCGGCACCTACCTCGGCGTC GTCTTCGGCGACATCCAGATCGGACTCGCCATTGCAGTTGGGATATCGATTCTCCGGATC CTATTGTTCATCGCACGGCCGAAGACGACAGTCCTCGGGAAGATGCCAAACTCGACGAAC TTCAGGAGGATGGACCAGTACACCGTGGCGAAGGCCGTGCCGGGATTGCTCGTGCTTCGC ATCGACTCACCTATCTACTTCGCCAATTCAGGCTACCTGCGAGAGAGGATCATGCGGTGG ATCGACCACGAGGAGGACCGGATCAAGGCCGAGGGTCTGGAGAGCTTGAAGTGTGTAGTC TTGGACATGGGTGCCGTTGCCAGCATCGACACGAGCGGCACGAAGATGTTGGAAGATCTC AAGAAGAACCTAGACAGGAGTAGCATTCAGATTGCGCTGGCGAACCCGGGGAGTGAAATC ATGAGGAAATTGGACAAATCAAATGTTCTCGGGCTCATCGGAGAGGAGTGGATCTTCCTG ACAGTGAGCGAGGCATGCTACTATGCGCAGCAAAACTGCAAGATAGGAGTAGGAATGGGT GTAGTACAATGTGTAGTAGATCCTGAACACATGGTCTGA

Peptide Sequence

PEP ID	Os10t0420400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14798144:14800301:1 gene:Os10g0420400 transcript:Os10t0420400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SULPHATE TRANSPORTER 3;1 description:Similar to Sulfate transporter 3.1 (AST12) (AtST1). (Os10t0420400-01)
Sequence	SIKADLFIFCNNLLYIQSKRKPKWFLLSAMAPLASVIAGSVLVYLIHGDRHGIPVIGYLK KGINPPSARDLLLSSPHTMVALRTGIITGIIGLAEGIAIGRSFAMLKSYNVDGNKEMIAF GAMNIVGSCTSCYLTAGPFSRAAVNHNAGCKTPMSNAVMAVAVMLTLQFLTPLFHYTPLV VLSAIIISAMIGIIDYKAAVRLWKVDKIDFCVCVGTYLGVVFGDIQIGLAIAVGISILRI LLFIARPKTTVLGKMPNSTNFRRMDQYTVAKAVPGLLVLRIDSPIYFANSGYLRERIMRW IDHEEDRIKAEGLESLKCVVLDMGAVASIDTSGTKMLEDLKKNLDRSSIQIALANPGSEI MRKLDKSNVLGLIGEEWIFLTVSEACYYAQQNCKIGVGMGVVQCVVDPEHMV

Transcript Sequence

Transcript ID	Os10t0420400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14798144:14800301:1 gene:Os10g0420400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SULPHATE TRANSPORTER 3;1 description:Similar to Sulfate transporter 3.1 (AST12) (AtST1). (Os10t0420400-01)
Sequence	ATCTTTAATTTAGCTAGTCAAGAAAACCCAATGTTCTGAATTTCTGATGCTCTGATCGAT CAAAGCTGATTTATTTATTTTTTGTAATAATCTGTTGTACATTCAGAGCAAGAGGAAGCC TAAGTGGTTCTTGCTATCAGCGATGGCGCCGTTGGCGTCGGTCATCGCCGGAAGCGTTCT GGTCTACCTCATCCACGGCGACCGCCATGGCATCCCGGTGATTGGGTACCTGAAGAAGGG GATAAACCCGCCGTCGGCGCGCGATCTCCTCCTGTCGTCGCCGCACACGATGGTCGCTCT CAGGACCGGGATCATCACCGGCATCATCGGCCTCGCCGAGGGAATCGCGATCGGGAGGAG CTTCGCAATGCTGAAGAGCTACAATGTCGACGGGAACAAGGAGATGATCGCCTTCGGGGC GATGAACATCGTCGGCTCCTGCACCTCCTGCTACCTCACAGCTGGCCCGTTCTCGAGGGC GGCGGTGAACCACAACGCCGGGTGCAAGACGCCGATGTCGAACGCGGTGATGGCGGTGGC CGTGATGCTGACGCTGCAGTTCCTGACGCCGCTCTTCCACTACACCCCGCTGGTGGTGCT CTCGGCGATCATCATCTCGGCGATGATCGGCATCATCGACTACAAGGCCGCCGTCCGGCT GTGGAAGGTTGACAAGATCGACTTCTGCGTCTGCGTCGGCACCTACCTCGGCGTCGTCTT CGGCGACATCCAGATCGGACTCGCCATTGCAGTTGGGATATCGATTCTCCGGATCCTATT GTTCATCGCACGGCCGAAGACGACAGTCCTCGGGAAGATGCCAAACTCGACGAACTTCAG GAGGATGGACCAGTACACCGTGGCGAAGGCCGTGCCGGGATTGCTCGTGCTTCGCATCGA CTCACCTATCTACTTCGCCAATTCAGGCTACCTGCGAGAGAGGATCATGCGGTGGATCGA CCACGAGGAGGACCGGATCAAGGCCGAGGGTCTGGAGAGCTTGAAGTGTGTAGTCTTGGA CATGGGTGCCGTTGCCAGCATCGACACGAGCGGCACGAAGATGTTGGAAGATCTCAAGAA GAACCTAGACAGGAGTAGCATTCAGATTGCGCTGGCGAACCCGGGGAGTGAAATCATGAG GAAATTGGACAAATCAAATGTTCTCGGGCTCATCGGAGAGGAGTGGATCTTCCTGACAGT GAGCGAGGCATGCTACTATGCGCAGCAAAACTGCAAGATAGGAGTAGGAATGGGTGTAGT ACAATGTGTAGTAGATCCTGAACACATGGTCTGAAACTCTGTAATAGAATGTGCAGTACA CCAGTATCTCCTG