Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0419500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:14757127:14759763:-1 gene:Os10g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARD4 description:Similar to SIPL. (Os10t0419500-01)
Sequence

ATGGCTCATCTGGTATGGATGCTGGGGGAGAACGGAGAGGAGAAGAGCTTCGAGAATCCC
AACGAGTTGCTGCCACTCTCCAGACTTGAAGAGATCGGTGTGTTGTATTGGCACTTGGAT
CCTAAGAAGTCTGAAAGCGAAGAAGAGCTCACAAAAATCCGCAGAGAAAGAGGATACAGC
TACTTTGATCTTACTGAGATATGCCCTGATAAATTGGAAAATTATGAGGAGAAGCTGAAG
AGCTTCTATTGTGAGCACATTCATGCTGATGAAGAGATCCGGTACTGCTTGGAGGGTAGC
GGTTACTTTGATGTCCGTGACAAGGATGACAAATGGATTCGGATTTGGATAAAAGAGGGA
GACATGATCATCCTGCCAGCTGGGATTTATCATCGGTTCATCGTCGACAGCAACAACTAT
ATCAAGCTCATGAGGCTCTTCATTGGAGAACCAGTCTGGACCGCATACAACCGGCCACAG
GAAGACCATCCTGTGAGGCAAGAGTATGTCAAGAATGTGAAGGGGGACACCGGATTTGCT
CTTGCCGCACATTGA

Peptide Sequence

PEP ID

Os10t0419500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:14757127:14759763:-1 gene:Os10g0419500 transcript:Os10t0419500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARD4 description:Similar to SIPL. (Os10t0419500-01)
Sequence

MAHLVWMLGENGEEKSFENPNELLPLSRLEEIGVLYWHLDPKKSESEEELTKIRRERGYS
YFDLTEICPDKLENYEEKLKSFYCEHIHADEEIRYCLEGSGYFDVRDKDDKWIRIWIKEG
DMIILPAGIYHRFIVDSNNYIKLMRLFIGEPVWTAYNRPQEDHPVRQEYVKNVKGDTGFA
LAAH

Transcript Sequence

Transcript ID

Os10t0419500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:14757127:14759763:-1 gene:Os10g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARD4 description:Similar to SIPL. (Os10t0419500-01)
Sequence

AGTGTTCCAGGGATCTGCAATCTGTTGCTCTCCACTCACCCGACTCCAAATCAACTCCGC
AACCTCCCTGTGGCTCTCTTCCCATCACCAATCTCCGCCACAATCCGCTCACAAGAACAC
GACGAATTCGAGCAGGACAATCTTTGGTTTCTGGAACCAACCAGTAATCCATCCTCCTCA
TCGATATATACTCCATACACGTCCGGGCAAGCAGAAACCAAAACGGAAAAGCTCTCGGAT
TTCCCCGTCCCCATCTCGTTCTGTTCCCACTAGCCATGGCTCATCTGGTATGGATGCTGG
GGGAGAACGGAGAGGAGAAGAGCTTCGAGAATCCCAACGAGTTGCTGCCACTCTCCAGAC
TTGAAGAGATCGGTGTGTTGTATTGGCACTTGGATCCTAAGAAGTCTGAAAGCGAAGAAG
AGCTCACAAAAATCCGCAGAGAAAGAGGATACAGCTACTTTGATCTTACTGAGATATGCC
CTGATAAATTGGAAAATTATGAGGAGAAGCTGAAGAGCTTCTATTGTGAGCACATTCATG
CTGATGAAGAGATCCGGTACTGCTTGGAGGGTAGCGGTTACTTTGATGTCCGTGACAAGG
ATGACAAATGGATTCGGATTTGGATAAAAGAGGGAGACATGATCATCCTGCCAGCTGGGA
TTTATCATCGGTTCATCGTCGACAGCAACAACTATATCAAGCTCATGAGGCTCTTCATTG
GAGAACCAGTCTGGACCGCATACAACCGGCCACAGGAAGACCATCCTGTGAGGCAAGAGT
ATGTCAAGAATGTGAAGGGGGACACCGGATTTGCTCTTGCCGCACATTGAGTTTGCTGAA
TTGGGGGCTCACTATACAACTGTCCTATACATCACACTACTCATGAAATCATGAACCCAT
GCTGTTTTTATCATGAATCATGAAAACACATATGCAGTACACTTGAAAACTATCATATGT
AGTACTACTATCCGGCTATCCTACAAAAATTTTAGTACTACTTGAAACATTGCAGTATAC
ACAGTGACTGGTCCTGTACTCTTGTGCAATGTACTACACCAAAAATTGTCTATAACAAGT
CGGTTGGATACCCTAATGAAAATATTGCTCTGTATTCCATTTGG