Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0418100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14681977:14685413:-1 gene:Os10g0418100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 8 description:Calcium-transporting ATPase, Salinity stress tolerance (Os10t0418100-01)
Sequence	ATGGAGTGCGCTGACTACTTCATCGGCTCCGGGCGGCGGTGCTCGCCGTCGACGTCGACG TCGACGTCGAGAGAGGCGTGGAGGCCGGAGAAGCAATGGCGGAAAGCCACCAACGTCATC AGGGGGTGTCATAGGCTTCTGCGCCTCGGCGTCCTCTCCGCCGCCGCCGGCATCATGCGC CGGAACCCCTCCTATGTCGAGATCAAAGTGCACGACGAAGGCGAGCTGGACGTCTCATCC GGCGGCGACGGCGAGGCACCCGTGGCGTTCACTGTCGCCGCAGATGATGAGTCGTTCAAG GGACTCGTCAAGAACAAGCGGGAGGACTGCTTCCGCCTTCTGGGCGGCGGCGCCGGCGTC GCGGCGGTGCTGGCGTCCGGCGCGGAGCGCGGCATCCGCGGCGACGATGCCGACGTGGCG CGCCGCAAGAAGGCGTTCGGATCGAACACCTACCCGAAGCCCAAGCCCAAGGGGTTCTTC CGCCACGTGTGGGACGCGCTCGCCGACGTCTTCCTCATCGTGCTCCTCGTCTGCGCCGCC GTCTCCCTCGCCTTCGGCATCAAGGAGCACGGCATCAAGGACGGCTGGTACGACGGCGTC AGCATCTTCCTCGCCGTGTTCCTCGTCGCCGCGGTCTCCGCCGTCAGCAACCACAGCCAG GGCAAGCGGTTCGACAAGCTGGCACGGGAGTCCGAGAACATCATGGTCAGCGTCGTCCGC GCCGCGCGGCGCCAGGAGGTGTCCATATTCGACGTCGTCGTCGGCGACGTGGTGGTGCTC AAGATCGGCGACGTCGTCCCCGCCGACGGCGTGTTCCTGGACGGCCACGCGCTGCAGGTC GACGAGTCGAGCATGACCGGCGAGCCGCACCCCGTCGAGGTCGACGCCGTCAAGAGCCCC TTCCTCGCCTCCGGCGTCAAGGTGGTCGACGGCTACGGCAAGATGGTGGTCACCGCCGTC GGGACGGACACGGCGTGGGGCGAGATGATGCGCACCATCACCAGGGAGAACACCGACCCG ACGCCGCTCCAGGAGCGCCTCGAGGGGCTCACCTCCAGCATCGGCAAGGTCGGCATCGCC GTCGCGGTGCTCGTCTTCGCCGTGCTCACGGCGAGGCACTTCACCGGCAGCACCAGGGAC GAGCAGGGCAACGCGCTGTTCGACAAGAGGAATGTCACCTTCAACGCCGTGTTCAGCGGC CTCGTCGGCATCTTCCAGCAAGCCGTCACCATCATCGTCGTCGCCATCCCCGAGGGCCTC CCGCTCGCCGTGACATTGACGCTGGCCTTCTCCATGAAGAGGATGGTGAGGGAGAACGCG CTGGTGCGGCGGCTGTCGGCGTGCGAGACGATGGGCTCGGTCACCGCCATCTGCACCGAC AAGACCGGGACGCTGACGCTGAACCAGATGAAGGTGACGGAGTTCTGGGTCGGCGCCGAC CGGCCAAGATCCGCCGCGGCGGTGAACGGCGGCGTCGTGAGGTTGCTCTGCCAGGGCGCC GGGCTGAACACCACGGGCAGCGTGTACAAGCCGGACAACGTGTCGCCGCCGGAGATCACC GGCAGCCCGACGGAGAAGGCGCTGCTGTCGTGGGCGGTGGAGGAGCTCCCCATGGACGCC GACGCGCTCAAGAGGAAATGCAAGGTGGTGCGCGTCGAGGCGTTCAACTCCGACAAGAAG CGCAGCGGCGTGATGCTCCGCGACGCCGCCACCGGCGCGGTGACCGCGCACTGGAAAGGC GCCGCCGAGATGGTGCTCGCGAGGTGCACCGTGTACGTCGGCGCAGACGGCGCCGCGCGC GAGCTCGGCGTGGAGCAGAGGAGGAAGCTCGAGCAGGTGATCAACGACATGGCGGCGGCG AGCCTCCGCTGCATCGCGTTCGCCTACAAGCAAGTCGTCGACGGCGGCGACAGCGACAAC GCCAAGATCGACGACGAGGGGCTGACATTGCTGGGCTTCGTCGGACTGAAAGACCCGTGC AGACCAGAGGTAAAATCCGCCATCGAAGCTTGCACCAAAGCAGGCATCGCCGTCAAGATG GTCACCGGCGACAACGTCCTCACGGCTCGCGCCATCGCCAAGGAATGCGGCATCATCTCC GGCAACGACGACGACGCCGCCGGCGTCGTGATCGAGGGGCACGAGTTCCGCGCCATGTCG GAGCAGGAGCAGCTCGCCATCGTCGACAACATCCGCGTCATGGCGCGGTCGCTGCCACTC GACAAGCTGGTGCTCGTCCAGCGCCTGAAGCAGAAGGGCCACGTGGTGGCCGTCACCGGC GACGGCACGAACGACGCGCCGGCGCTGAAAGAAGCCGACGTGGGCCTCTCCATGGGAGTC CAGGGCACCGAGGTCGCCAAGGAGAGCTCCGACATCGTCATCCTCAACGACAACTTCGAC ACGGTGGTGACGGCGACGCGGTGGGGCCGCTGCGTGTACAACAACATCCAGAAGTTCATC CAGTTCCAGCTCACCGTCAACGTCGCGGCGCTCGTCATCAACTTCGTGTCGGCGGTGACC ACGGGCAGGATGCCGCTGACCACGGTGCAGCTGCTGTGGGTGAACCTGATCATGGACACC ATGGGCGCGCTGGCGCTCGCCACGGACACGCCGACGGCGGGGCTGATGCGCCGCCCGCCC ATCGGCCGCGCGGCGCCGCTGATCAGCAACGCCATGTGGCGCAACCTGGCGGCGCAGGCG GCGTACCAGGTGGCCGTGCTGCTGGCGCTCCAGTACCGCGGCTTCGGCGGCGCCGGCGCC GGCGAGAGGGCGAACGGGACGATGATCTTCAACGCGTTCGTGCTGTGCCAGGTGTTCAAC GAGTTCAACGCGAGGGAGATCGAGAGGAGGAACGTGTTCGCCGGCGTGCACCGGAACAGG ATGTTCCTGGGCATCGTCGCCGTCACGGTGGCGCTGCAGGTGGTGATGGTGGAGTTGCTG ACCAAGTTCGCCGGAACGGAGAGGCTGGGGTGGGGGCAGTGGGGCGCCTGCGTCGGCATT GCCGCCGTGTCGTGGCCCATCGGGTGGGCCGTCAAGTGCATCCCGGTGCCGGAGCGGCCG TTCCACGAGATCATCACGGCGAGGAGGAGGAGGAGAAGATCGACATAA

Peptide Sequence

PEP ID	Os10t0418100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14681977:14685413:-1 gene:Os10g0418100 transcript:Os10t0418100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 8 description:Calcium-transporting ATPase, Salinity stress tolerance (Os10t0418100-01)
Sequence	MECADYFIGSGRRCSPSTSTSTSREAWRPEKQWRKATNVIRGCHRLLRLGVLSAAAGIMR RNPSYVEIKVHDEGELDVSSGGDGEAPVAFTVAADDESFKGLVKNKREDCFRLLGGGAGV AAVLASGAERGIRGDDADVARRKKAFGSNTYPKPKPKGFFRHVWDALADVFLIVLLVCAA VSLAFGIKEHGIKDGWYDGVSIFLAVFLVAAVSAVSNHSQGKRFDKLARESENIMVSVVR AARRQEVSIFDVVVGDVVVLKIGDVVPADGVFLDGHALQVDESSMTGEPHPVEVDAVKSP FLASGVKVVDGYGKMVVTAVGTDTAWGEMMRTITRENTDPTPLQERLEGLTSSIGKVGIA VAVLVFAVLTARHFTGSTRDEQGNALFDKRNVTFNAVFSGLVGIFQQAVTIIVVAIPEGL PLAVTLTLAFSMKRMVRENALVRRLSACETMGSVTAICTDKTGTLTLNQMKVTEFWVGAD RPRSAAAVNGGVVRLLCQGAGLNTTGSVYKPDNVSPPEITGSPTEKALLSWAVEELPMDA DALKRKCKVVRVEAFNSDKKRSGVMLRDAATGAVTAHWKGAAEMVLARCTVYVGADGAAR ELGVEQRRKLEQVINDMAAASLRCIAFAYKQVVDGGDSDNAKIDDEGLTLLGFVGLKDPC RPEVKSAIEACTKAGIAVKMVTGDNVLTARAIAKECGIISGNDDDAAGVVIEGHEFRAMS EQEQLAIVDNIRVMARSLPLDKLVLVQRLKQKGHVVAVTGDGTNDAPALKEADVGLSMGV QGTEVAKESSDIVILNDNFDTVVTATRWGRCVYNNIQKFIQFQLTVNVAALVINFVSAVT TGRMPLTTVQLLWVNLIMDTMGALALATDTPTAGLMRRPPIGRAAPLISNAMWRNLAAQA AYQVAVLLALQYRGFGGAGAGERANGTMIFNAFVLCQVFNEFNAREIERRNVFAGVHRNR MFLGIVAVTVALQVVMVELLTKFAGTERLGWGQWGACVGIAAVSWPIGWAVKCIPVPERP FHEIITARRRRRRST

Transcript Sequence

Transcript ID	Os10t0418100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14681977:14685413:-1 gene:Os10g0418100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 8 description:Calcium-transporting ATPase, Salinity stress tolerance (Os10t0418100-01)
Sequence	CATATAGGAATCCATCCTTCCACCACCAATTAAATTCAGTTTCGCACCAATTCAGCAAAT CCTTGGACCATTTTCTTTGAGAGTAATCGCTTGTGTTTCTCGAAATTGTGAGTAGTTTGA TCCATTCATCTTTGTTGGTCGCTTGATTCGGCAGCGCCTGATCGATCAGGATCGGGTACT GGATGGAGTGCGCTGACTACTTCATCGGCTCCGGGCGGCGGTGCTCGCCGTCGACGTCGA CGTCGACGTCGAGAGAGGCGTGGAGGCCGGAGAAGCAATGGCGGAAAGCCACCAACGTCA TCAGGGGGTGTCATAGGCTTCTGCGCCTCGGCGTCCTCTCCGCCGCCGCCGGCATCATGC GCCGGAACCCCTCCTATGTCGAGATCAAAGTGCACGACGAAGGCGAGCTGGACGTCTCAT CCGGCGGCGACGGCGAGGCACCCGTGGCGTTCACTGTCGCCGCAGATGATGAGTCGTTCA AGGGACTCGTCAAGAACAAGCGGGAGGACTGCTTCCGCCTTCTGGGCGGCGGCGCCGGCG TCGCGGCGGTGCTGGCGTCCGGCGCGGAGCGCGGCATCCGCGGCGACGATGCCGACGTGG CGCGCCGCAAGAAGGCGTTCGGATCGAACACCTACCCGAAGCCCAAGCCCAAGGGGTTCT TCCGCCACGTGTGGGACGCGCTCGCCGACGTCTTCCTCATCGTGCTCCTCGTCTGCGCCG CCGTCTCCCTCGCCTTCGGCATCAAGGAGCACGGCATCAAGGACGGCTGGTACGACGGCG TCAGCATCTTCCTCGCCGTGTTCCTCGTCGCCGCGGTCTCCGCCGTCAGCAACCACAGCC AGGGCAAGCGGTTCGACAAGCTGGCACGGGAGTCCGAGAACATCATGGTCAGCGTCGTCC GCGCCGCGCGGCGCCAGGAGGTGTCCATATTCGACGTCGTCGTCGGCGACGTGGTGGTGC TCAAGATCGGCGACGTCGTCCCCGCCGACGGCGTGTTCCTGGACGGCCACGCGCTGCAGG TCGACGAGTCGAGCATGACCGGCGAGCCGCACCCCGTCGAGGTCGACGCCGTCAAGAGCC CCTTCCTCGCCTCCGGCGTCAAGGTGGTCGACGGCTACGGCAAGATGGTGGTCACCGCCG TCGGGACGGACACGGCGTGGGGCGAGATGATGCGCACCATCACCAGGGAGAACACCGACC CGACGCCGCTCCAGGAGCGCCTCGAGGGGCTCACCTCCAGCATCGGCAAGGTCGGCATCG CCGTCGCGGTGCTCGTCTTCGCCGTGCTCACGGCGAGGCACTTCACCGGCAGCACCAGGG ACGAGCAGGGCAACGCGCTGTTCGACAAGAGGAATGTCACCTTCAACGCCGTGTTCAGCG GCCTCGTCGGCATCTTCCAGCAAGCCGTCACCATCATCGTCGTCGCCATCCCCGAGGGCC TCCCGCTCGCCGTGACATTGACGCTGGCCTTCTCCATGAAGAGGATGGTGAGGGAGAACG CGCTGGTGCGGCGGCTGTCGGCGTGCGAGACGATGGGCTCGGTCACCGCCATCTGCACCG ACAAGACCGGGACGCTGACGCTGAACCAGATGAAGGTGACGGAGTTCTGGGTCGGCGCCG ACCGGCCAAGATCCGCCGCGGCGGTGAACGGCGGCGTCGTGAGGTTGCTCTGCCAGGGCG CCGGGCTGAACACCACGGGCAGCGTGTACAAGCCGGACAACGTGTCGCCGCCGGAGATCA CCGGCAGCCCGACGGAGAAGGCGCTGCTGTCGTGGGCGGTGGAGGAGCTCCCCATGGACG CCGACGCGCTCAAGAGGAAATGCAAGGTGGTGCGCGTCGAGGCGTTCAACTCCGACAAGA AGCGCAGCGGCGTGATGCTCCGCGACGCCGCCACCGGCGCGGTGACCGCGCACTGGAAAG GCGCCGCCGAGATGGTGCTCGCGAGGTGCACCGTGTACGTCGGCGCAGACGGCGCCGCGC GCGAGCTCGGCGTGGAGCAGAGGAGGAAGCTCGAGCAGGTGATCAACGACATGGCGGCGG CGAGCCTCCGCTGCATCGCGTTCGCCTACAAGCAAGTCGTCGACGGCGGCGACAGCGACA ACGCCAAGATCGACGACGAGGGGCTGACATTGCTGGGCTTCGTCGGACTGAAAGACCCGT GCAGACCAGAGGTAAAATCCGCCATCGAAGCTTGCACCAAAGCAGGCATCGCCGTCAAGA TGGTCACCGGCGACAACGTCCTCACGGCTCGCGCCATCGCCAAGGAATGCGGCATCATCT CCGGCAACGACGACGACGCCGCCGGCGTCGTGATCGAGGGGCACGAGTTCCGCGCCATGT CGGAGCAGGAGCAGCTCGCCATCGTCGACAACATCCGCGTCATGGCGCGGTCGCTGCCAC TCGACAAGCTGGTGCTCGTCCAGCGCCTGAAGCAGAAGGGCCACGTGGTGGCCGTCACCG GCGACGGCACGAACGACGCGCCGGCGCTGAAAGAAGCCGACGTGGGCCTCTCCATGGGAG TCCAGGGCACCGAGGTCGCCAAGGAGAGCTCCGACATCGTCATCCTCAACGACAACTTCG ACACGGTGGTGACGGCGACGCGGTGGGGCCGCTGCGTGTACAACAACATCCAGAAGTTCA TCCAGTTCCAGCTCACCGTCAACGTCGCGGCGCTCGTCATCAACTTCGTGTCGGCGGTGA CCACGGGCAGGATGCCGCTGACCACGGTGCAGCTGCTGTGGGTGAACCTGATCATGGACA CCATGGGCGCGCTGGCGCTCGCCACGGACACGCCGACGGCGGGGCTGATGCGCCGCCCGC CCATCGGCCGCGCGGCGCCGCTGATCAGCAACGCCATGTGGCGCAACCTGGCGGCGCAGG CGGCGTACCAGGTGGCCGTGCTGCTGGCGCTCCAGTACCGCGGCTTCGGCGGCGCCGGCG CCGGCGAGAGGGCGAACGGGACGATGATCTTCAACGCGTTCGTGCTGTGCCAGGTGTTCA ACGAGTTCAACGCGAGGGAGATCGAGAGGAGGAACGTGTTCGCCGGCGTGCACCGGAACA GGATGTTCCTGGGCATCGTCGCCGTCACGGTGGCGCTGCAGGTGGTGATGGTGGAGTTGC TGACCAAGTTCGCCGGAACGGAGAGGCTGGGGTGGGGGCAGTGGGGCGCCTGCGTCGGCA TTGCCGCCGTGTCGTGGCCCATCGGGTGGGCCGTCAAGTGCATCCCGGTGCCGGAGCGGC CGTTCCACGAGATCATCACGGCGAGGAGGAGGAGGAGAAGATCGACATAACTATCAACGC TTACCACTGTTCATATTTTCGGATTTTTGTCGGTAGCTTAGGCCATTCTTTTGGAGATAT TATACCATCTTGTTATTTGCCATATATAATATGATATATGATTTGTTTGGTTCATCAATA TTACTCATATCTTTTCT