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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0418000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:14678198:14679366:1 gene:Os10g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os10t0418000-01)
Sequence

ATGGCGGGGAAGGGAGGGAAGGGGCTGCTCGCGGCGAAGACGACGGCGGCGAAGGCCGCC
GCCGACAAGGACAAGGACCGCAAGAAGGCGCCCGTCTCCCGCTCCTCCCGCGCCGGGATC
CAGTTCCCGGTGGGGCGTATCCACAGGCAGCTGAAGGGGAGGGTGTCGGCGAACGGCCGC
GTGGGGGCGACGGCGGCGGTGTACACGGCGGCGATCCTCGAGTACCTGACGGCGGAGGTC
CTGGAGCTCGCCGGCAACGCCAGCAAGGACCTCAAGGTGAAGCGCATCACCCCGCGCCAC
CTGCAGCTCGCCATCCGCGGGGACGAGGAGCTCGACACCCTCATCAAGGGCACCATAGCC
GGCGGCGGCGTCATCCCGCACATCCACAAGTCCCTCATCAACAAGACCGCCAAGGAGTAG

Peptide Sequence

PEP ID

Os10t0418000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:14678198:14679366:1 gene:Os10g0418000 transcript:Os10t0418000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os10t0418000-01)
Sequence

MAGKGGKGLLAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGR
VGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIA
GGGVIPHIHKSLINKTAKE

Transcript Sequence

Transcript ID

Os10t0418000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:14678198:14679366:1 gene:Os10g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os10t0418000-01)
Sequence

GGGAGAGAGAGCGGACGCGAGGCAGCCGAACCACCAACGCGAGCGAGAGAGGGAGAGGGA
GAGGAGGAGGAGGAGCAATGGCGGGGAAGGGAGGGAAGGGGCTGCTCGCGGCGAAGACGA
CGGCGGCGAAGGCCGCCGCCGACAAGGACAAGGACCGCAAGAAGGCGCCCGTCTCCCGCT
CCTCCCGCGCCGGGATCCAGTTCCCGGTGGGGCGTATCCACAGGCAGCTGAAGGGGAGGG
TGTCGGCGAACGGCCGCGTGGGGGCGACGGCGGCGGTGTACACGGCGGCGATCCTCGAGT
ACCTGACGGCGGAGGTCCTGGAGCTCGCCGGCAACGCCAGCAAGGACCTCAAGGTGAAGC
GCATCACCCCGCGCCACCTGCAGCTCGCCATCCGCGGGGACGAGGAGCTCGACACCCTCA
TCAAGGGCACCATAGCCGGCGGCGGCGTCATCCCGCACATCCACAAGTCCCTCATCAACA
AGACCGCCAAGGAGTAGGAGAGGCAGCGGCGGCTATGTGTTCTTGGAAGTTTTCTATGAC
CTCTCTGCTAGGGGATTAGTGAGAAAAAAATCCCAGTTATCTTTTCACTAGTAGTCTTAA
TCATTTAGGACTTGTTGTTATGGTGATTACCTGAATTAGGTGTTCCTGAATCTGTGTAAT
GGCTGGCTAAACCTTTGGTAATTTGGTGGTAGGGCTGAAGACTTGACTTGCAGCAGCTTG
GTGTAGTTGTGATGTGAAACTGCTTATATTTTTCTCTCTGTTGGGTGACTAGCTAATGCT
TGGTTGTTACTTGTTGATG