Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0417800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14657778:14659426:-1 gene:Os10g0417800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os10t0417800-01)
Sequence	ATGAGGGCCGCCGCCGCCCCCGATCCGTCCCCGGCGCCGGCGAGGTCGATGCTGAAGCGG CTGTTCGATCGCCAGCTGCTGCGCGTCTCCCCCGCCGAGCGGATTGTGGCGGTGGGCGGG GGGGAGAAGGATGAGGTGGAGCCGAGCTCCGTGTGCCTGGATGGCATGGTGCGCAGCTTC TTGGAGGACGGGAGCGGCGTGGGCGCGGCTGTCGAGCGGGCTGGCGGCCATGGCGCGCGG CGCTGCAACTGCTTCCATGGCGGCGGGAGCTCCGACGACGACGACGACGAGGACGACGCC GCCGCGTCCTCCGACGTCGCCGAGACGATCAAGGGGCTCGTGCACTGCGCCACGCTCCGG GAGCGCAACCTCCTCGCCGACGTCTGCGGCCACGTGGAGCGGCACCGGGCGGGCGGGGCA AGGAGGCGGGAGCTCCTCGGCCTGGTGGCGGCGTCGCTCCGCGCGGCGGGGCACGACGCC GCCGTGTGCGTCTCCCGCTGGGACAAGTCCCCCACCCACCCCGCCGGCGAGCACGCCTAC GTCGACGTGCTCCTCCCGCCGGCCTCCGACCGCGGCGCGCGCGAGCGCGTCCTGGTCGAC GTCGACTTCCGCTCCGCCTTCGAGGTCGCCCGCCCCACCAAGGCCTACCGCGCGCTGCTG CAGCGCCTCCCCGCGGTGTTCGTCGGCAAGGACGACCGCCTCCGCCTCCTCGTCGCCGCC TCCGCCGACGCCGCGCGCGCCAGCCTCAGGAAGCGCGGCCTCCACCTCCCGCCATGGCGC AAGCCCGAGTACATGCGCGCCAAGTGGCTGTCCCCCTACGACCGCGAGCCAGCGCCGCCC GACGAGGCCTCCGCCTCCGCCGCCGCGGCCGAGGTCGCTGGAGAGGAAGCCCCCGCCGCC GCGTAA

Peptide Sequence

PEP ID	Os10t0417800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14657778:14659426:-1 gene:Os10g0417800 transcript:Os10t0417800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os10t0417800-01)
Sequence	MRAAAAPDPSPAPARSMLKRLFDRQLLRVSPAERIVAVGGGEKDEVEPSSVCLDGMVRSF LEDGSGVGAAVERAGGHGARRCNCFHGGGSSDDDDDEDDAAASSDVAETIKGLVHCATLR ERNLLADVCGHVERHRAGGARRRELLGLVAASLRAAGHDAAVCVSRWDKSPTHPAGEHAY VDVLLPPASDRGARERVLVDVDFRSAFEVARPTKAYRALLQRLPAVFVGKDDRLRLLVAA SADAARASLRKRGLHLPPWRKPEYMRAKWLSPYDREPAPPDEASASAAAAEVAGEEAPAA A

Transcript Sequence

Transcript ID	Os10t0417800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14657778:14659426:-1 gene:Os10g0417800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os10t0417800-01)
Sequence	CCCCCAAAATTCCACAACAAAAAAACACCCCCAAAAAAGATCAAAAAACCCTAACCTCCG ATCGAATCATCGCCACCCTCCGCCGCCGCCGCCGCCCGCCGTCTCCGGCCATGTCCCCGT CAATCGCCGCCTCCCAGGATCGCGTCTCCCGGTGATTACTCCCCCGCGCCCTCGTCTCCA TTTTCTTGTGCTGGTATGAGGGCCGCCGCCGCCCCCGATCCGTCCCCGGCGCCGGCGAGG TCGATGCTGAAGCGGCTGTTCGATCGCCAGCTGCTGCGCGTCTCCCCCGCCGAGCGGATT GTGGCGGTGGGCGGGGGGGAGAAGGATGAGGTGGAGCCGAGCTCCGTGTGCCTGGATGGC ATGGTGCGCAGCTTCTTGGAGGACGGGAGCGGCGTGGGCGCGGCTGTCGAGCGGGCTGGC GGCCATGGCGCGCGGCGCTGCAACTGCTTCCATGGCGGCGGGAGCTCCGACGACGACGAC GACGAGGACGACGCCGCCGCGTCCTCCGACGTCGCCGAGACGATCAAGGGGCTCGTGCAC TGCGCCACGCTCCGGGAGCGCAACCTCCTCGCCGACGTCTGCGGCCACGTGGAGCGGCAC CGGGCGGGCGGGGCAAGGAGGCGGGAGCTCCTCGGCCTGGTGGCGGCGTCGCTCCGCGCG GCGGGGCACGACGCCGCCGTGTGCGTCTCCCGCTGGGACAAGTCCCCCACCCACCCCGCC GGCGAGCACGCCTACGTCGACGTGCTCCTCCCGCCGGCCTCCGACCGCGGCGCGCGCGAG CGCGTCCTGGTCGACGTCGACTTCCGCTCCGCCTTCGAGGTCGCCCGCCCCACCAAGGCC TACCGCGCGCTGCTGCAGCGCCTCCCCGCGGTGTTCGTCGGCAAGGACGACCGCCTCCGC CTCCTCGTCGCCGCCTCCGCCGACGCCGCGCGCGCCAGCCTCAGGAAGCGCGGCCTCCAC CTCCCGCCATGGCGCAAGCCCGAGTACATGCGCGCCAAGTGGCTGTCCCCCTACGACCGC GAGCCAGCGCCGCCCGACGAGGCCTCCGCCTCCGCCGCCGCGGCCGAGGTCGCTGGAGAG GAAGCCCCCGCCGCCGCGTAAACAAGAGGTGCCGCTTGGAATTTTCAACCTTCAGGAGGG CCTAAATGCAAAGTTAAATTTCTTCGATTTTAACACTTTTTTTTGGGGAATCTCGAGTAT TTTGGGGAGTGAGAAGAGTATGTATTACGCGAAATGGAGACAGCAATATGTAGTGTAGTT TTAGTATTAGGAGAAAACAAGAAGTACAAAAAAAAAGAAGAAATCTTTTGGTTAGGATCA GATCAGGTTAGCATCCACTTTTGGTCCCAAATTAAGCCTATAATATTTCATAAGTAGTAG TACTAGCTAGAAGCTTGATCATGATAGTATGGTGAGATTATGGCCATTAGGCTCCTGTTT GTTTTCATTTTTGTAAGCAAAATGTTGCCCAGCAGACAAGTTGAGGCGAGAGATGAGTAC ATCATACACGGAGCTTTTGATTTTGATTTGGATTTTG