Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0417600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14640044:14643338:1 gene:Os10g0417600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-D-mannose-3', 5'-epimerase 1, GDP-D-mannose epimerase 1 description:NAD(P)-binding domain containing protein. (Os10t0417600-01)
Sequence	ATGGGGAGCTCGGAGAAGAACGGAACTGCTTATGGCGAGTACACCTATGCTGAACTGGAG AGGGAGCAGTACTGGCCGTCTGAGAAGCTGAGGATATCGATCACCGGAGCTGGTGGTTTC ATTGGATCCCACATTGCTCGCCGTCTGAAGAGCGAGGGGCATTACATCATCGCCTCCGAC TGGAAGAAGAATGAGCACATGACTGAGGACATGTTCTGCCATGAGTTCCACCTTGTTGAC CTTAGGGTCATGGACAACTGCCTCAAGGTCACCAACGGCGTCGACCATGTGTTCAACCTT GCCGCTGATATGGGTGGTATGGGGTTCATTCAGTCCAACCACTCTGTGATCATGTACAAC AACACCATGATCAGTTTCAACATGCTCGAGGCTGCACGTATCAATGGTGTGAAGAGGTTC TTCTATGCCTCAAGTGCATGCATTTACCCTGAATTCAAGCAGCTTGAAACTAACGTTAGC CTGAAGGAATCTGATGCCTGGCCTGCTGAGCCTCAAGATGCCTATGGTTTGGAGAAGCTT GCAACTGAGGAGCTCTGCAAGCACTACACCAAGGACTTTGGCATTGAGTGCCGTGTTGGC CGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGGTGGCCGTGAGAAGGCACCA GCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTGATGGC CTCCAGACCCGGTCCTTCACATTCATAGATGAGTGTGTTGAGGGTGTTCTGAGGTTGACA AAGTCGGACTTCCGTGAGCCAGTGAACATTGGAAGCGATGAAATGGTAAGCATGAACGAG ATGGCTGAAATCATTCTCAGCTTCGAGGATAGGGAGCTGCCCATCCACCACATCCCTGGA CCCGAGGGTGTCCGTGGCCGTAACTCCGACAACACCCTCATCAAGGAGAAGCTTGGCTGG GCACCCACAATGAAGCTCAAGGACGGGCTGAGGTTCACCTACTTCTGGATCAAGGAGCAG ATAGAGAAGGAGAAGACCCAGGGCGTCGACATCGCGGGTTACGGCTCATCCAAGGTGGTG TCCACCCAGGCCCCGGTTCAGCTGGGCTCCCTCCGTGCTGCCGATGGCAAGGAGTAA

Peptide Sequence

PEP ID	Os10t0417600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14640044:14643338:1 gene:Os10g0417600 transcript:Os10t0417600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-D-mannose-3', 5'-epimerase 1, GDP-D-mannose epimerase 1 description:NAD(P)-binding domain containing protein. (Os10t0417600-01)
Sequence	MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD WKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYN NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL ATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG LQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG PEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAGYGSSKVV STQAPVQLGSLRAADGKE

Transcript Sequence

Transcript ID	Os10t0417600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14640044:14643338:1 gene:Os10g0417600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-D-mannose-3', 5'-epimerase 1, GDP-D-mannose epimerase 1 description:NAD(P)-binding domain containing protein. (Os10t0417600-01)
Sequence	CTCCCTCTCATCATCATCATCATCCTCCTCCTCCCTATCCCCTTCTCCCCCCTCTCTCTC TCTCTCCACCCCGCGCGGCGGCCGCTTCCGATCCCTCTCCGACCGACCAAGCGCCGCCTC CAAGAATGGGGAGCTCGGAGAAGAACGGAACTGCTTATGGCGAGTACACCTATGCTGAAC TGGAGAGGGAGCAGTACTGGCCGTCTGAGAAGCTGAGGATATCGATCACCGGAGCTGGTG GTTTCATTGGATCCCACATTGCTCGCCGTCTGAAGAGCGAGGGGCATTACATCATCGCCT CCGACTGGAAGAAGAATGAGCACATGACTGAGGACATGTTCTGCCATGAGTTCCACCTTG TTGACCTTAGGGTCATGGACAACTGCCTCAAGGTCACCAACGGCGTCGACCATGTGTTCA ACCTTGCCGCTGATATGGGTGGTATGGGGTTCATTCAGTCCAACCACTCTGTGATCATGT ACAACAACACCATGATCAGTTTCAACATGCTCGAGGCTGCACGTATCAATGGTGTGAAGA GGTTCTTCTATGCCTCAAGTGCATGCATTTACCCTGAATTCAAGCAGCTTGAAACTAACG TTAGCCTGAAGGAATCTGATGCCTGGCCTGCTGAGCCTCAAGATGCCTATGGTTTGGAGA AGCTTGCAACTGAGGAGCTCTGCAAGCACTACACCAAGGACTTTGGCATTGAGTGCCGTG TTGGCCGCTTCCACAACATATATGGCCCCTTTGGAACATGGAAAGGTGGCCGTGAGAAGG CACCAGCTGCATTCTGCAGGAAGGCTCAGACTTCCACTGACAGGTTTGAGATGTGGGGTG ATGGCCTCCAGACCCGGTCCTTCACATTCATAGATGAGTGTGTTGAGGGTGTTCTGAGGT TGACAAAGTCGGACTTCCGTGAGCCAGTGAACATTGGAAGCGATGAAATGGTAAGCATGA ACGAGATGGCTGAAATCATTCTCAGCTTCGAGGATAGGGAGCTGCCCATCCACCACATCC CTGGACCCGAGGGTGTCCGTGGCCGTAACTCCGACAACACCCTCATCAAGGAGAAGCTTG GCTGGGCACCCACAATGAAGCTCAAGGACGGGCTGAGGTTCACCTACTTCTGGATCAAGG AGCAGATAGAGAAGGAGAAGACCCAGGGCGTCGACATCGCGGGTTACGGCTCATCCAAGG TGGTGTCCACCCAGGCCCCGGTTCAGCTGGGCTCCCTCCGTGCTGCCGATGGCAAGGAGT AATTTCAAAGCTGCTACACCATGAAGATCAATCAGCTCCTCTCAGCTTGATCGTGGCCAT ACCTTACTTCGCTACAGATAGCTCACAGAAATGAATTCTTCTTGGAAATCTTGCAACCTT TCAGAACAACAACAGCCGTTCTTCCTGTCGTTATAACTCATATGCAGTACACCGGTTTCT TGTGTTTAAAAAGCTATACTCGAGATTTCTTCCTCTTTTTTTTTTCGCGTCGTGTTGGAA ATTCTTCGTATGGATTACATTTTGTCATATGAACAATGAAACAATGGGAATGCTCTGCAT TACCTTTATGAATAGATGATGTGTTCTTCC