Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0416200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:14560601:14565737:-1 gene:Os10g0416200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION2 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os10t0416200-01)
Sequence	ATGGACAGGGAGCTGGTGAGGACGGTGAAGCTGGCGACCAAGAACCACGCCGGCGTGCTG TTCCGCCGCGCCGTGCGCCACCTCCCCCACATCGTGGCGGTGACGGCGCTGGTGGCGGCG GCGCCGCGGCTGTCGACGCTGCTGGCGGCGGCGGCGGCCGGCGGAAGCACCATGCGCTGG GCGCGCGCGCTGTGGTCCGACCTCGCCGGCGAGCTGGGCCCGAGCGCGCCGGCGCTGGCG GTGGCGTGCTGGGCGGCGGCGCTGGCGGCGTACACCTACGCCGCGTCCCGCCCGCGCCCC GTCTACCTCATCGACCTCGCCGGCTACAAGGCGCCGCGGGAGCACGAGGCGTCGCGCGCC AAGACGATCGCCCACTTCGGGCGGTGCGGGCGGTTCAGCGGCGAGAGCATGGCGTTCCAG AAGCGGATGCTGGAGCGGTCGGGGCTCGGGGAGGCGACCCACTTCCCGACGTCGCTGATC AGCCTCCCCGTGGACATGTGCCTCCGCACGGCGAGGGAGGAGTCGCACGCCGTCATCTTC GGCGTCGTCGACGAGGTGCTCCGCAAGTCCGGCGTCGCGGCGGCCGACGTCGGCGTGCTC ATCTTCAACTCCAGCCTCCTCTCCCCGACGCCCTCCTTCACCTCGCTCATCGTCAACCGC TACGGGATGCGCCCCGGCGTCGTCTCCCACAACCTCAGCGGCATGGGATGCAGCGCCGGC ATCATCGCCATTGATCTCGCCAAGCGCCTCCTCCAGGTGCACGAGAACACGTACGCGCTG GTGGTGAGCACGGAGAACATCACCCTGAACGCGTACATGGGCAACAACCGGCCGATGCTG GTGACCAACACCCTGTTCCGCGTCGGCGGCGCGGCGATCCTCCTCTCCAACCGCGCCGCC GACCGCCGCGGCCGCGCCAAGTACCAGCTGATCCACACGGTGCGCACCCACCGCGGCGCC CACGACCAGAGCTTCGGGTGCGTGACCCAGGAGGAGGACGACGCCGGCGAGGTCGGCGTC TCCCTCTCCAAGGAGCTCATGGTGGTCGCCGGCGAGGCCCTCAAGACCAACATCACAACC CTCGGCCCCCTCGTCCTCCCCATCTCCGAGCAGCTCCGCTTCCTCGCCACCGTCGTCCTC AAGCGCGTCTTCCGCGCCGACGTCAAGGCCTACCTCCCGGACTTCAAGCTCGCCCTCGAC CACTTCTGCATCCACGCGGGGGGCCGCGGCGTCCTCGACGAGCTCGAGAAGAGCCTCAAG CTCTCGCCGTGGGACATGGAGCCGTCGCGGATGACGCTCTACCGCTTCGGCAACACGTCC AGCAGCTCGCTGTGGTACGAGCTCGCCTACTGCGAGGCCAAGGGGAGGATCAAGCGCGGC GACCGGGTGTGGCAGATCGCCTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGG GCGCTGCGCACCGTCGACGCCGCGGGCCTCGACGCCGGCGACAACCCGTGGATGAAGGAG GTGGACATGCTCCCCGTCGACGTGCCCAAGGTGGCGCCCATCGATGAGACCTCCTACCAG ATCCCAAACTAA

Peptide Sequence

PEP ID	Os10t0416200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:14560601:14565737:-1 gene:Os10g0416200 transcript:Os10t0416200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION2 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os10t0416200-01)
Sequence	MDRELVRTVKLATKNHAGVLFRRAVRHLPHIVAVTALVAAAPRLSTLLAAAAAGGSTMRW ARALWSDLAGELGPSAPALAVACWAAALAAYTYAASRPRPVYLIDLAGYKAPREHEASRA KTIAHFGRCGRFSGESMAFQKRMLERSGLGEATHFPTSLISLPVDMCLRTAREESHAVIF GVVDEVLRKSGVAAADVGVLIFNSSLLSPTPSFTSLIVNRYGMRPGVVSHNLSGMGCSAG IIAIDLAKRLLQVHENTYALVVSTENITLNAYMGNNRPMLVTNTLFRVGGAAILLSNRAA DRRGRAKYQLIHTVRTHRGAHDQSFGCVTQEEDDAGEVGVSLSKELMVVAGEALKTNITT LGPLVLPISEQLRFLATVVLKRVFRADVKAYLPDFKLALDHFCIHAGGRGVLDELEKSLK LSPWDMEPSRMTLYRFGNTSSSSLWYELAYCEAKGRIKRGDRVWQIAFGSGFKCNSAVWR ALRTVDAAGLDAGDNPWMKEVDMLPVDVPKVAPIDETSYQIPN

Transcript Sequence

Transcript ID	Os10t0416200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:14560601:14565737:-1 gene:Os10g0416200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ONION2 description:Fatty acid elongase (beta-ketoacyl-CoA synthase), Shoot development (Os10t0416200-01)
Sequence	TTCTTCCTTTGCTTCCATTGAAGACTAGAGAAGAGAGAGGAGGTGAGAGGTGAACTGGTG ATAACAATGGACAGGGAGCTGGTGAGGACGGTGAAGCTGGCGACCAAGAACCACGCCGGC GTGCTGTTCCGCCGCGCCGTGCGCCACCTCCCCCACATCGTGGCGGTGACGGCGCTGGTG GCGGCGGCGCCGCGGCTGTCGACGCTGCTGGCGGCGGCGGCGGCCGGCGGAAGCACCATG CGCTGGGCGCGCGCGCTGTGGTCCGACCTCGCCGGCGAGCTGGGCCCGAGCGCGCCGGCG CTGGCGGTGGCGTGCTGGGCGGCGGCGCTGGCGGCGTACACCTACGCCGCGTCCCGCCCG CGCCCCGTCTACCTCATCGACCTCGCCGGCTACAAGGCGCCGCGGGAGCACGAGGCGTCG CGCGCCAAGACGATCGCCCACTTCGGGCGGTGCGGGCGGTTCAGCGGCGAGAGCATGGCG TTCCAGAAGCGGATGCTGGAGCGGTCGGGGCTCGGGGAGGCGACCCACTTCCCGACGTCG CTGATCAGCCTCCCCGTGGACATGTGCCTCCGCACGGCGAGGGAGGAGTCGCACGCCGTC ATCTTCGGCGTCGTCGACGAGGTGCTCCGCAAGTCCGGCGTCGCGGCGGCCGACGTCGGC GTGCTCATCTTCAACTCCAGCCTCCTCTCCCCGACGCCCTCCTTCACCTCGCTCATCGTC AACCGCTACGGGATGCGCCCCGGCGTCGTCTCCCACAACCTCAGCGGCATGGGATGCAGC GCCGGCATCATCGCCATTGATCTCGCCAAGCGCCTCCTCCAGGTGCACGAGAACACGTAC GCGCTGGTGGTGAGCACGGAGAACATCACCCTGAACGCGTACATGGGCAACAACCGGCCG ATGCTGGTGACCAACACCCTGTTCCGCGTCGGCGGCGCGGCGATCCTCCTCTCCAACCGC GCCGCCGACCGCCGCGGCCGCGCCAAGTACCAGCTGATCCACACGGTGCGCACCCACCGC GGCGCCCACGACCAGAGCTTCGGGTGCGTGACCCAGGAGGAGGACGACGCCGGCGAGGTC GGCGTCTCCCTCTCCAAGGAGCTCATGGTGGTCGCCGGCGAGGCCCTCAAGACCAACATC ACAACCCTCGGCCCCCTCGTCCTCCCCATCTCCGAGCAGCTCCGCTTCCTCGCCACCGTC GTCCTCAAGCGCGTCTTCCGCGCCGACGTCAAGGCCTACCTCCCGGACTTCAAGCTCGCC CTCGACCACTTCTGCATCCACGCGGGGGGCCGCGGCGTCCTCGACGAGCTCGAGAAGAGC CTCAAGCTCTCGCCGTGGGACATGGAGCCGTCGCGGATGACGCTCTACCGCTTCGGCAAC ACGTCCAGCAGCTCGCTGTGGTACGAGCTCGCCTACTGCGAGGCCAAGGGGAGGATCAAG CGCGGCGACCGGGTGTGGCAGATCGCCTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTG TGGAGGGCGCTGCGCACCGTCGACGCCGCGGGCCTCGACGCCGGCGACAACCCGTGGATG AAGGAGGTGGACATGCTCCCCGTCGACGTGCCCAAGGTGGCGCCCATCGATGAGACCTCC TACCAGATCCCAAACTAATAAGGGGATATATGAGGCTATATAGCTATTATAATTTATAAG TAGTAGACTTCTTGTTCTGTCGATCGATATGATGATCTCAAGAATATGGAGCCATTGCTA GGCTGCTTATGTATGATGATGATGATGATAGGCCTTTATTATTAGGGCTTAATTTGGCTA TTAATCAATCATTGTGTTTGTGTGTGTCCTGATTAATTCTATGGACTTGCAAGAAA