Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0413500-03
CDS Infomation

cds chromosome:IRGSP-1.0:10:14428234:14429762:-1 gene:Os10g0413500 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0413500-01);Similar to Prolyl 4-hydroxylase. (Os10t0413500-03)
Sequence

CAGGACGAAGTTGTAGCTAGGATAGAGGAGAGGATTGCAGCTTGGACGTTCCTTCCACCA
GATAATGGCGAATCCATTCAAATATTACATTATCAGAATGGCGAGAAGTATGAGCCACAC
TATGATTACTTCCATGACAAAAATAATCAAGCTCTTGGAGGACATCGGATCGCCACTGTG
CTCATGTACCTTTCAGACGTTGGGAAGGGGGGAGAGACCATCTTTCCAGAAGCAGAGGGG
AAGTTATTACAACCCAAGGATGATACATGGTCTGACTGTGCTAAAAATGGATATGCAGTA
AAACCGGTAAAGGGTGATGCCCTTCTGTTCTTCAGTCTCCACCCCGATGCAACAACAGAC
TCTGACAGCCTGCACGGGAGCTGCCCGGTCATTGAAGGTCAGAAGTGGTCCGCAACTAAA
TGGATCCATGTGAGGTCCTTCGACATCTCTGTCAAGCAGGGAGCTTCCACTGACGGGTGC
GAGGATGAGAACGTCCTCTGCCCCCAGTGGGCTGCAGTAGGGGAGTGTGCCAAGAATCCG
AACTACATGGTGGGTACCAATGAAGCACCTGGCTTCTGCCGGAAGAGCTGCAATGTGTGT
GCACAGTAA

Peptide Sequence

PEP ID

Os10t0413500-03
PEP Infomation

pep chromosome:IRGSP-1.0:10:14428234:14429762:-1 gene:Os10g0413500 transcript:Os10t0413500-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0413500-01);Similar to Prolyl 4-hydroxylase. (Os10t0413500-03)
Sequence

QDEVVARIEERIAAWTFLPPDNGESIQILHYQNGEKYEPHYDYFHDKNNQALGGHRIATV
LMYLSDVGKGGETIFPEAEGKLLQPKDDTWSDCAKNGYAVKPVKGDALLFFSLHPDATTD
SDSLHGSCPVIEGQKWSATKWIHVRSFDISVKQGASTDGCEDENVLCPQWAAVGECAKNP
NYMVGTNEAPGFCRKSCNVCAQ

Transcript Sequence

Transcript ID

Os10t0413500-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:14428234:14429762:-1 gene:Os10g0413500 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0413500-01);Similar to Prolyl 4-hydroxylase. (Os10t0413500-03)
Sequence

GCAGGACGAAGTTGTAGCTAGGATAGAGGAGAGGATTGCAGCTTGGACGTTCCTTCCACC
AGATAATGGCGAATCCATTCAAATATTACATTATCAGAATGGCGAGAAGTATGAGCCACA
CTATGATTACTTCCATGACAAAAATAATCAAGCTCTTGGAGGACATCGGATCGCCACTGT
GCTCATGTACCTTTCAGACGTTGGGAAGGGGGGAGAGACCATCTTTCCAGAAGCAGAGGG
GAAGTTATTACAACCCAAGGATGATACATGGTCTGACTGTGCTAAAAATGGATATGCAGT
AAAACCGGTAAAGGGTGATGCCCTTCTGTTCTTCAGTCTCCACCCCGATGCAACAACAGA
CTCTGACAGCCTGCACGGGAGCTGCCCGGTCATTGAAGGTCAGAAGTGGTCCGCAACTAA
ATGGATCCATGTGAGGTCCTTCGACATCTCTGTCAAGCAGGGAGCTTCCACTGACGGGTG
CGAGGATGAGAACGTCCTCTGCCCCCAGTGGGCTGCAGTAGGGGAGTGTGCCAAGAATCC
GAACTACATGGTGGGTACCAATGAAGCACCTGGCTTCTGCCGGAAGAGCTGCAATGTGTG
TGCACAGTAAGTTACTGATCCACCCTTGTGATACATAGCAGCACGCCCTCGATAATTGTT
GCCGCGGTACCGGGTGTATATAGGACTGAGCATAGCATGTGTAACCTGGAAGGAGTTAAG
ATGTACTAAGATCCATTTCGCCTATATGCACCTAGAAAAATTATAGCCAGACTCTTGTTT
CTGTTCATTGTTCAAGCTCGAGGCTAGTTACTCATTTTAGCTGAAGCAATGGAATCTACG
ACCACGGATTGTACACTCTTCTTTGCTTCACTTTCTGTGGCAATCGATTGCTTTTCTTCT
TGGAAAGGAAAGTTATTCTTCTGGTGAAACTGGTTGCTTGCAATTTACAAAAACGAGAGA
CAACTCAATTGATCTGGACCAGATTTGATAAGTAGACTCGTAGTATGTATATATCAATAA
TGTCTGGTGTCGTTTTACTTGTTGGGTTGTTGTTCAGTTGCCGAATCGAATGGAACACCT
ATGCCCTGGCCTATGTGTAATGTGTGATACCCAATCTACCAAACCAAATAAATTTGCTTT
TATGTTC