Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0412700-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:14399191:14400692:-1 gene:Os10g0412700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os10t0412700-01)
Sequence

ATGGCGTGCTTATCCTTGCTCTCCGGCGTTCATCCCCTACCACTACTCCTGCTCATTACT
CTCTTAGGACCGGTGGCGCTCGTGCGCGGCGTCACCTTCCGCGTGGTGAACAAGTGCCCG
TTCCCGGTGTGGCCGGCGGCGGCGCCCAACGCCGGCCACCCGGTGCTCGCCGGCGGCGGC
TTCCTCCTCCCGCCGGGCCAGTCCAGGCGCGTCAGCGCGCCGCCCACCTGGAACGGCCGC
TTCTGGGGCCGCACCGGCTGCAACTTCACCTCCACCGCCACCAACCACCACGGCAACGCC
GCCGCGTCCTGCCTCACCGGCGACTGCGGCGGCCGCCTCGCGTGCAACGGCACCGCCGGC
GCCCCTCCGGCCACCCTCGTCGAGGTGGACCTCCACGAGGACCAGAGCAAGGGGAGCTCC
TACGACGTCAGCCTCGTCGACGGCTACAACCTGCCGGTGGCCGTGTGGACGAAGCCCCCC
ACCCCCGGCGCCGCCGCCGCCGATCGCAAGTGCGTCATCCCCGGCTGCGCCAAGAACGTC
AACGCGGTGTGCCCGCCGGAGCTGCAGGTGACGGCGGCGGCGGCGGTGGTGGCGTGCAAG
AGCGCGTGCGTGGCGTTCGGGACGGACGCGTTCTGCTGCCGCGGCGCGCACGGCACGGCG
GAGACGTGCCGCGGCAGCGCGTACTCGCGGGTGTTCCGGGACGCGTGCCCGGCGTACGTC
AGCTACCCGTACGACACGGCGGCGGCGAGGTGCTACGCGGAGGTGTACGTGCTCACATTC
TGTCCGTCCAGATGGGGCGCGGGGGCAGATCGTGTGGCCCAGGCTTGA

Peptide Sequence

PEP ID

Os10t0412700-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:14399191:14400692:-1 gene:Os10g0412700 transcript:Os10t0412700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os10t0412700-01)
Sequence

MACLSLLSGVHPLPLLLLITLLGPVALVRGVTFRVVNKCPFPVWPAAAPNAGHPVLAGGG
FLLPPGQSRRVSAPPTWNGRFWGRTGCNFTSTATNHHGNAAASCLTGDCGGRLACNGTAG
APPATLVEVDLHEDQSKGSSYDVSLVDGYNLPVAVWTKPPTPGAAAADRKCVIPGCAKNV
NAVCPPELQVTAAAAVVACKSACVAFGTDAFCCRGAHGTAETCRGSAYSRVFRDACPAYV
SYPYDTAAARCYAEVYVLTFCPSRWGAGADRVAQA

Transcript Sequence

Transcript ID

Os10t0412700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:14399191:14400692:-1 gene:Os10g0412700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thaumatin, pathogenesis-related family protein. (Os10t0412700-01)
Sequence

ATCTCCATGACAGCTTAGTTAGTTTCTCTGGTTTGCTATATAGATTTAGACACAGATGGC
GTGCTTATCCTTGCTCTCCGGCGTTCATCCCCTACCACTACTCCTGCTCATTACTCTCTT
AGGACCGGTGGCGCTCGTGCGCGGCGTCACCTTCCGCGTGGTGAACAAGTGCCCGTTCCC
GGTGTGGCCGGCGGCGGCGCCCAACGCCGGCCACCCGGTGCTCGCCGGCGGCGGCTTCCT
CCTCCCGCCGGGCCAGTCCAGGCGCGTCAGCGCGCCGCCCACCTGGAACGGCCGCTTCTG
GGGCCGCACCGGCTGCAACTTCACCTCCACCGCCACCAACCACCACGGCAACGCCGCCGC
GTCCTGCCTCACCGGCGACTGCGGCGGCCGCCTCGCGTGCAACGGCACCGCCGGCGCCCC
TCCGGCCACCCTCGTCGAGGTGGACCTCCACGAGGACCAGAGCAAGGGGAGCTCCTACGA
CGTCAGCCTCGTCGACGGCTACAACCTGCCGGTGGCCGTGTGGACGAAGCCCCCCACCCC
CGGCGCCGCCGCCGCCGATCGCAAGTGCGTCATCCCCGGCTGCGCCAAGAACGTCAACGC
GGTGTGCCCGCCGGAGCTGCAGGTGACGGCGGCGGCGGCGGTGGTGGCGTGCAAGAGCGC
GTGCGTGGCGTTCGGGACGGACGCGTTCTGCTGCCGCGGCGCGCACGGCACGGCGGAGAC
GTGCCGCGGCAGCGCGTACTCGCGGGTGTTCCGGGACGCGTGCCCGGCGTACGTCAGCTA
CCCGTACGACACGGCGGCGGCGAGGTGCTACGCGGAGGTGTACGTGCTCACATTCTGTCC
GTCCAGATGGGGCGCGGGGGCAGATCGTGTGGCCCAGGCTTGACGGATATGATGTGAGAC
GTATCGAGTAGACGAGTAACACTCCGGCATGCGTGTATCTAAGTAGGAGTAGTATGTACT
ATATACGGAGTATGTATTTATACGTGTACTATTACGTATTTACATTC