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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0407200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:13940043:13941101:-1 gene:Os10g0407200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os10t0407200-01)
Sequence

ATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGCGTTCTACGCGGCG
TACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTC
ACCGCGATGCTCCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCG
CTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCG
TACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGG
TGGGCCGCCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGG
AGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTC
TTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCG
CTGTTCGTCTTCATCGAGGTAATTGGCCGTGTTCGTTCGAGTTGGTCGCCGTGCGGCGAT
GGCGACCGCCAAGTGTTCGATTTAATGCGAGTGCGGTTGCTCCGTGTTTTTGCAGGTGCT
GCATAG

Peptide Sequence

PEP ID

Os10t0407200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:13940043:13941101:-1 gene:Os10g0407200 transcript:Os10t0407200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os10t0407200-01)
Sequence

MARLRRGLEHLERRYAFYAAYHSNPANVLVHAVCVWPILLTAMLPLRYAPPLPLLRFYCP
LCRQYLPVQLGFPVAVALGAYYALMDRRAGAAAAALCVAGWAAGTLLADAAGLWTFRDAW
RPLLTAQAVLWSAQFFSHAFFEKRRPALVDGPVQAVVTAPLFVFIEVIGRVRSSWSPCGD
GDRQVFDLMRVRLLRVFAGAA

Transcript Sequence

Transcript ID

Os10t0407200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:13940043:13941101:-1 gene:Os10g0407200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os10t0407200-01)
Sequence

TCGATCCAAGAAGCAGAGAGGAGAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCT
GCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAA
CCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCT
CCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCA
GTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCT
CATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGCCGG
GACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCT
CACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCG
GCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTT
CATCGAGGTAATTGGCCGTGTTCGTTCGAGTTGGTCGCCGTGCGGCGATGGCGACCGCCA
AGTGTTCGATTTAATGCGAGTGCGGTTGCTCCGTGTTTTTGCAGGTGCTGCATAGGTTGT
TCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGC
ACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGA
ACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGG
AGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTC
ATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAATTTTC