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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0406600-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:13905198:13906597:-1 gene:Os10g0406600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os10t0406600-01)
Sequence

ATGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACG
GCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCGGACGCC
TTCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGCGGCAGTGTTCGCGGACGGG
AAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAG
GCCAAGAGCATCATGGAGATGAAGCTGCAGTGA

Peptide Sequence

PEP ID

Os10t0406600-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:13905198:13906597:-1 gene:Os10g0406600 transcript:Os10t0406600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os10t0406600-01)
Sequence

MAAAPTRAEALSLFRSLLRTARQFSDYNIREYARRRAADAFRENRALGDAVAAAAVFADG
KKQLEVAKRQAVVYSLYAPKAKSIMEMKLQ

Transcript Sequence

Transcript ID

Os10t0406600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:13905198:13906597:-1 gene:Os10g0406600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os10t0406600-01)
Sequence

GTTTGGTCTCGTTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGG
CTGAACAGGGGAGGGCCGGGTGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGG
GGATCCTGGTTCAGGGGCATCTCCTCTTTTCTTTCCCTTGCCGCCATTAGCCCAAGCAGC
TATCTGGATTCTGGAGTAGTTCTCTAGCGCACGAACAGCATCCGTGACGAAGCGCATCCA
TGGCGGCAGCACCGACGAGAGCGGAGGCGCTGTCCCTCTTCCGGTCCCTCCTCCGCACGG
CAAGGCAGTTCTCTGACTACAACATCCGCGAGTACGCGCGCCGCCGCGCCGCGGACGCCT
TCCGTGAGAACCGTGCCCTCGGCGATGCGGTTGCCGCGGCGGCAGTGTTCGCGGACGGGA
AGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGG
CCAAGAGCATCATGGAGATGAAGCTGCAGTGATCGGTGCAACTAAAACTGAGATGTTATT
ATGTTTGCTAGATAATTTCCATGACATGGTTGCTATGAGTTCAATAAACTAGTCAATTCC
AC