Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0406400-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:13896201:13897680:-1 gene:Os10g0406400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A2 description:Similar to Cellulose synthase-like A1. (Os10t0406400-00)
Sequence	ATGGATTTGGCTGTAAGGGCAAGCCTAAAGGGATGGGAGTTCTTGTATGTTGGTGATATA AGGGTGAAGAGTGAACTCCCAAGTACCTTCCAGGCCTACCGTCACCAACAACATAGATGG ACATGTGGTGCTGCCAATCTTTTCAGAAAAATGGCATGGGAAATTATTACAAACAAGGAG GTATCAATGTGGAAGAAATATCATCTTCTGTACAGTTTTTTCTTCGTACGGAGAGCCATT GCTCCCATCCTGACTTTCTTGTTCTACTGTATTGTCATCCCATTGTCTGCCATGGTTCCT GAAGTCACTATTCCTGTGTGGGGCCTGGTCTATATTCCCACAGCCATTACTATTATGAAT GCCATCAGAAATCCAGGGTCAGTCCATCTCATGCCATTCTGGATTCTATTTGAGAATGTC ATGGCCATGCACCGTATGCGTGCAGCTCTAAGCGGTTTACTTGAAACTGCACGTGCAAAT GATTGGGTAGTTACTGAAAAAGTAGGTGATCAGGTGAAGGATGAGCTTGATGTCCCACTT CTTGAACCACTGAAGCCCACTGAATGTGCTGAAAGGATTTACATTCCTGAGCTCTTGCTT GCGCTCTATCTCCTTATATGTGCATCGTATGATTTCGTTCTTGGAAATCATAAATACTAC ATCTACATCTACCTCCAAGCTGTTGCATTCACTGTGATGGGGTTTGGCTTTGTTGGAACA AGAACTCCTTGTTCGTAG

Peptide Sequence

PEP ID	Os10t0406400-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:13896201:13897680:-1 gene:Os10g0406400 transcript:Os10t0406400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A2 description:Similar to Cellulose synthase-like A1. (Os10t0406400-00)
Sequence	MDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYRHQQHRWTCGAANLFRKMAWEIITNKE VSMWKKYHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPEVTIPVWGLVYIPTAITIMN AIRNPGSVHLMPFWILFENVMAMHRMRAALSGLLETARANDWVVTEKVGDQVKDELDVPL LEPLKPTECAERIYIPELLLALYLLICASYDFVLGNHKYYIYIYLQAVAFTVMGFGFVGT RTPCS

Transcript Sequence

Transcript ID	Os10t0406400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13896201:13897680:-1 gene:Os10g0406400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE A2 description:Similar to Cellulose synthase-like A1. (Os10t0406400-00)
Sequence	CGCGTATCTGCTATTAATCAATCTGGAGGATGGAAAGACCGCACCACTGTGGAAGACATG GATTTGGCTGTAAGGGCAAGCCTAAAGGGATGGGAGTTCTTGTATGTTGGTGATATAAGG GTGAAGAGTGAACTCCCAAGTACCTTCCAGGCCTACCGTCACCAACAACATAGATGGACA TGTGGTGCTGCCAATCTTTTCAGAAAAATGGCATGGGAAATTATTACAAACAAGGAGGTA TCAATGTGGAAGAAATATCATCTTCTGTACAGTTTTTTCTTCGTACGGAGAGCCATTGCT CCCATCCTGACTTTCTTGTTCTACTGTATTGTCATCCCATTGTCTGCCATGGTTCCTGAA GTCACTATTCCTGTGTGGGGCCTGGTCTATATTCCCACAGCCATTACTATTATGAATGCC ATCAGAAATCCAGGGTCAGTCCATCTCATGCCATTCTGGATTCTATTTGAGAATGTCATG GCCATGCACCGTATGCGTGCAGCTCTAAGCGGTTTACTTGAAACTGCACGTGCAAATGAT TGGGTAGTTACTGAAAAAGTAGGTGATCAGGTGAAGGATGAGCTTGATGTCCCACTTCTT GAACCACTGAAGCCCACTGAATGTGCTGAAAGGATTTACATTCCTGAGCTCTTGCTTGCG CTCTATCTCCTTATATGTGCATCGTATGATTTCGTTCTTGGAAATCATAAATACTACATC TACATCTACCTCCAAGCTGTTGCATTCACTGTGATGGGGTTTGGCTTTGTTGGAACAAGA ACTCCTTGTTCGTAGCTTACCATTTACCATTTGAGATTTTTTTTCTCCTATGACAAGAGC CAGTATTTTGTGTGCAAGAAGGATGATCTGATGATAGGATATACAAAATTGGGTTAAATG ATCTAGGCTAGAGATGTGTATATTTCTAATTGATGCAGAATGGGAGAGATGACTTCTAGA GTTCCAACCTCCCAGTAGTGGTAGGATGAGCCACCAGCTGTATCTGTTTTATTCAGGCAT AATTTGGGAAATTACGTCCTGACTAACTAATAATCAATCAGTTTGATTCAGC