Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0406200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13870240:13875398:-1 gene:Os10g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-11, RING-H2 protein 11, heavy metal induced RING E3 ligase 1 description:Hypothetical conserved gene. (Os10t0406200-01)
Sequence	ATGGGGTCATTGTGCTGCGTCGCGTCGAGGCCCCATGGGGCCAGCACGGCTAGCCGGGAG TGGTCCTCGATTGGGCGGAGCGATCCGCTCTGGCGGACTAACGCTGGCTTTTCGCCGCCG CTGTCGAGGAGGTGGGAGTACCGCATCAATTCTGAGGGGCTGTCGTATGGCTCCCAGGGT GACAGCGGGGCTGCTGCGCACTACGGTTCGTCGCTATCCTCGAATAGTAAAGAGCCTAGT AGGAGCTGGGAGAGGAGTGATGTTCCACCGGATCATCATCGTTACTCCACCTCGGAAGGT GCCATTTCGTATTTTAACAGTCCGGATGTTACCTTCCAGAACCACCATATTATGCTTCCT ATGCTGCAGGATTCTGGCATTGATGAATACATGCGAGTCTCGGTGGCTGAGCCAATTGGT GCATTGTTATTGTCAGAGGGGATATCTGGACAGCAAAACAGTGGTGGTTCCACTTCCTCT CGCTCTGATGGAAGTGAATATGATATTGTACCAAAATCATATTCCTCTACCCCACGCAAC TTCCCAAGTCGTCGATCATTCCTGTCAAAGCCAATCCATCCGCTCTCGTTTCCAGAGCAT GCACTAGAAGGGCAAGAAACTGATAGCCCTGTTGCCAATGCAAGCACCAGCAGTCCTATG CCCTCGGAGTTCAAGGCAATAGGGGAGATCCGCCCGTCAGGTCTGATGGACTACGCCTAC GCCAGTGGCAGTCATGGGGAGTCAGCAAACTGGAGTGCCGCAAGTAGCATGGATCTTACC GATTTATCAGAACGACATGATGCTGAACGCTCTGGACCACTGCGTTCCAATAACATAATG GATAGAACAAGGTGCGACCTTTGCGAGAGGCTCTTGTCCAAGAGATCGCCCTGGGGCTCC CGCCGAATCGTCCGTACTGGAGATCTGCCTGTTGCTGGTGTGCTTCCCTGCTGCCATGTC TACCATGCCGAGTGCTTGGAGCGAACCACTCCCAAGGGGCAGAAGCATGACCCTCCTTGC CCTGCCTGCGATAGGCTGTCCGGCAAAGACACCGAGCAGTGGTCGATCTGCAGGCTAAGA AACGGATTCCCGAGGCTAAGGTCACTTGGGGAAGGCCCTTCCAGGGTCTGGAGCTGTGCC CAAGCTGGAGACTGCGTGGCTGGCGCTGTCCAGATACCAAGAGCAAGCAGCATCTCTCTG CTGAGCCGGAGTGGCCACAAGAGGCATCATGCTGCTTCCAAGGGAGAATCCGGCAAAGAC TGGGCTGAGACATCATCATCATCAAGAACTGCCTGCATGTAG

Peptide Sequence

PEP ID	Os10t0406200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13870240:13875398:-1 gene:Os10g0406200 transcript:Os10t0406200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-11, RING-H2 protein 11, heavy metal induced RING E3 ligase 1 description:Hypothetical conserved gene. (Os10t0406200-01)
Sequence	MGSLCCVASRPHGASTASREWSSIGRSDPLWRTNAGFSPPLSRRWEYRINSEGLSYGSQG DSGAAAHYGSSLSSNSKEPSRSWERSDVPPDHHRYSTSEGAISYFNSPDVTFQNHHIMLP MLQDSGIDEYMRVSVAEPIGALLLSEGISGQQNSGGSTSSRSDGSEYDIVPKSYSSTPRN FPSRRSFLSKPIHPLSFPEHALEGQETDSPVANASTSSPMPSEFKAIGEIRPSGLMDYAY ASGSHGESANWSAASSMDLTDLSERHDAERSGPLRSNNIMDRTRCDLCERLLSKRSPWGS RRIVRTGDLPVAGVLPCCHVYHAECLERTTPKGQKHDPPCPACDRLSGKDTEQWSICRLR NGFPRLRSLGEGPSRVWSCAQAGDCVAGAVQIPRASSISLLSRSGHKRHHAASKGESGKD WAETSSSSRTACM

Transcript Sequence

Transcript ID	Os10t0406200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13870240:13875398:-1 gene:Os10g0406200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein OsRFPH2-11, RING-H2 protein 11, heavy metal induced RING E3 ligase 1 description:Hypothetical conserved gene. (Os10t0406200-01)
Sequence	ACTTCTCCCTCCCCTCCCCCCTCTCACTTCCCCCTCCCCGCCGCCGCCGCCGCCGCCACC GCCGCCGCAATCGCTGGCGCGGCGGCCCGCCGTTTCACCCCCACAGCCCCGCTCGCCCCG GGAAGCCACCGCAGCCGCCGTACGTGGCGAGGGGGGGGAGGCCTCCGCCCTCCAGCACCT CCACCGCCGTGAGCCCCCCACGCCCAGATCCGCCGTCCACGACTGGGGGGGCGCTCCGCT TGGCCACCGGGCTGGAGCTTCGCTGGTGCCTTGAGGTGTTTGTTCTTGCAAGGGAGTTCT GCGAACAAGCTTATGGCTCGTCGATTACTTACGGCTACGAAAGGTTAATTTGATGGTGGA GTAACAGATAGCCAGAAGGGCACCTCCCGTTGGTTGAATTTTACGCAGCAAGAGAATCTG GAGATTGTTACTGGGATGTAGAGGCTGCTCAGAGTTTTTCTGGATTAGAGGTTTTTTTTG TCAGCGATGGGGTCATTGTGCTGCGTCGCGTCGAGGCCCCATGGGGCCAGCACGGCTAGC CGGGAGTGGTCCTCGATTGGGCGGAGCGATCCGCTCTGGCGGACTAACGCTGGCTTTTCG CCGCCGCTGTCGAGGAGGTGGGAGTACCGCATCAATTCTGAGGGGCTGTCGTATGGCTCC CAGGGTGACAGCGGGGCTGCTGCGCACTACGGTTCGTCGCTATCCTCGAATAGTAAAGAG CCTAGTAGGAGCTGGGAGAGGAGTGATGTTCCACCGGATCATCATCGTTACTCCACCTCG GAAGGTGCCATTTCGTATTTTAACAGTCCGGATGTTACCTTCCAGAACCACCATATTATG CTTCCTATGCTGCAGGATTCTGGCATTGATGAATACATGCGAGTCTCGGTGGCTGAGCCA ATTGGTGCATTGTTATTGTCAGAGGGGATATCTGGACAGCAAAACAGTGGTGGTTCCACT TCCTCTCGCTCTGATGGAAGTGAATATGATATTGTACCAAAATCATATTCCTCTACCCCA CGCAACTTCCCAAGTCGTCGATCATTCCTGTCAAAGCCAATCCATCCGCTCTCGTTTCCA GAGCATGCACTAGAAGGGCAAGAAACTGATAGCCCTGTTGCCAATGCAAGCACCAGCAGT CCTATGCCCTCGGAGTTCAAGGCAATAGGGGAGATCCGCCCGTCAGGTCTGATGGACTAC GCCTACGCCAGTGGCAGTCATGGGGAGTCAGCAAACTGGAGTGCCGCAAGTAGCATGGAT CTTACCGATTTATCAGAACGACATGATGCTGAACGCTCTGGACCACTGCGTTCCAATAAC ATAATGGATAGAACAAGGTGCGACCTTTGCGAGAGGCTCTTGTCCAAGAGATCGCCCTGG GGCTCCCGCCGAATCGTCCGTACTGGAGATCTGCCTGTTGCTGGTGTGCTTCCCTGCTGC CATGTCTACCATGCCGAGTGCTTGGAGCGAACCACTCCCAAGGGGCAGAAGCATGACCCT CCTTGCCCTGCCTGCGATAGGCTGTCCGGCAAAGACACCGAGCAGTGGTCGATCTGCAGG CTAAGAAACGGATTCCCGAGGCTAAGGTCACTTGGGGAAGGCCCTTCCAGGGTCTGGAGC TGTGCCCAAGCTGGAGACTGCGTGGCTGGCGCTGTCCAGATACCAAGAGCAAGCAGCATC TCTCTGCTGAGCCGGAGTGGCCACAAGAGGCATCATGCTGCTTCCAAGGGAGAATCCGGC AAAGACTGGGCTGAGACATCATCATCATCAAGAACTGCCTGCATGTAGCGTTGTAGCTTA GCTCAACGCATGTTTGCTTTGCTAAACCTGATGATCGATTTACCTTGCATTGCATTGCAT TGTCTCTTGTTGATGTGGATGCAAAAAGGCTTGATGTGTATCAGATGCAGATGTTGCCAT GGGATTAAAGTTAACTGGTCCGGCTAGGAGAAATGACATAGATGTGCCTATGTAGCTGAT GACTGAAATTTACCCCCCACCCCCCTTATTTTATATACCAAATATGAGGGCTGTAACCTT GTTCAT