Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0403000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13658790:13660543:-1 gene:Os10g0403000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASTOCHRON 1 description:Cytochrome P450 protein, CYP78A11, Regulation of leaf initiation rate and vegetative-reproductive phase change (Os10t0403000-01)
Sequence	ATGGCAATGGCCACCGCCACCGCCTCCTCCTGCGTCGACGCCACGTGGTGGGCGTACGCC CTCCCGGCGCTCCTCGGCGCCGACACCCTCTGCGCCCACCCGGCGCTGCTCGCCGGCGCC GTCCTCCTGGCCTTCGCCACCGCCGCGGTGCTCGCCTGGGCCGCGTCCCCCGGCGGGCCG GCGTGGGCGCACGGCCGCGGCCGCCTCGGCGCGACGCCCATCGAGGGGCCCCGGGGGCTC CCCGTGTTCGGCAGCATCTTCGCGCTCTCCCGGGGCCTCCCGCACCGCGCGCTCGACGCG ATGTCGCGCGACGCGGCGGCGCCACGGGCGAGGGAGCTCATGGCGTTCTCCGTCGGGGAG ACGCCGGCGGTGGTGTCGTCGTGCCCGGCGACGGCGAGGGAGGTGCTCGCGCACCCGTCG TTCGCCGACCGCCCGCTGAAGCGCTCGGCGCGGGAGCTGCTGTTCGCGCGCGCCATCGGG TTCGCCCCCAGCGGCGAGTACTGGCGCCTCCTCCGCCGCATCGCCTCCACCCACCTCTTC TCCCCTCGCCGCGTCGCCGCGCACGAGCCGGGGCGCCAGGCCGACGCCACGGCGATGCTG TCCGCCATGGCCGCCGAGCAGTCCGCCACCGGCGCCGTCGTGCTCCGCCCCCACCTCCAG GCCGCCGCGCTCAACAACATCATGGGCAGCGTGTTCGGCCGGCGCTACGACGTCTCCTCC TCCTCCGGCGCCGCCGCCGACGAGGCCGAGCAGCTCAAGAGCATGGTGCGCGAGGGGTTC GAGCTCCTCGGCGCGTTCAACTGGTCCGACCACCTCCCATGGCTCGCCCACCTCTACGAC CCCAACCACGTCGCCCGCCGCTGCGCCGCGCTCGTCCCCCGCGTCCAGGCGTTCGTCCGC GGCGTCATCCGCGACCACCGCCTCCGCCGCGACTCCTCCTCCACCGCCGCCGACAATGCC GACTTCGTCGACGTCCTCCTCTCCCTCGAGGCCCACGAGAACCTCGCCGAGGACGACATG GTCGCCGTCCTCTGGGAGATGATATTTCGTGGGACGGACACGACGGCGTTGGTGACGGAG TGGTGCATGGCGGAGGTGGTGAGGAACCCGGCGGTGCAGGCGAGGCTGAGGGCGGAGGTG GACGCGGCGGTGGGCGGCGACGGGTGTCCCAGCGACGGCGACGTGGCGCGGATGCCGTAC CTGCAGGCGGTGGTGAAGGAGACGCTGAGGGCGCACCCGCCGGGGCCGCTGCTGAGCTGG GCGCGGCTGGCCACCGCCGACGTGGGGCTCGCCAACGGCATGGTGGTGCCGGCGGGCACG ACGGCGATGGTGAACATGTGGGCCATCACCCACGACGGCGAGGTGTGGGCCGACCCGGAG GCGTTCGCGCCGGAGCGGTTCATCCCGTCGGAGGGCGGCGCCGACGTCGACGTCCGCGGC GGCGACCTCCGCCTGGCGCCGTTCGGCGCCGGGCGCCGCGTCTGCCCCGGCAAGAACCTC GGCCTCGCCACCGTCACCCTCTGGGTCGCCCGCCTCGTCCACGCCTTCGACTGGTTCCTC CCCGACGGCTCGCCGCCGGTGTCCCTCGACGAGGTCCTCAAGCTCTCCCTCGAGATGAAG ACCCCTCTCGCCGCCGCCGCCACCCCCCGCCGCCGCCGCGCCGCCTGA

Peptide Sequence

PEP ID	Os10t0403000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13658790:13660543:-1 gene:Os10g0403000 transcript:Os10t0403000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASTOCHRON 1 description:Cytochrome P450 protein, CYP78A11, Regulation of leaf initiation rate and vegetative-reproductive phase change (Os10t0403000-01)
Sequence	MAMATATASSCVDATWWAYALPALLGADTLCAHPALLAGAVLLAFATAAVLAWAASPGGP AWAHGRGRLGATPIEGPRGLPVFGSIFALSRGLPHRALDAMSRDAAAPRARELMAFSVGE TPAVVSSCPATAREVLAHPSFADRPLKRSARELLFARAIGFAPSGEYWRLLRRIASTHLF SPRRVAAHEPGRQADATAMLSAMAAEQSATGAVVLRPHLQAAALNNIMGSVFGRRYDVSS SSGAAADEAEQLKSMVREGFELLGAFNWSDHLPWLAHLYDPNHVARRCAALVPRVQAFVR GVIRDHRLRRDSSSTAADNADFVDVLLSLEAHENLAEDDMVAVLWEMIFRGTDTTALVTE WCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSW ARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRG GDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMK TPLAAAATPRRRRAA

Transcript Sequence

Transcript ID	Os10t0403000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13658790:13660543:-1 gene:Os10g0403000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PLASTOCHRON 1 description:Cytochrome P450 protein, CYP78A11, Regulation of leaf initiation rate and vegetative-reproductive phase change (Os10t0403000-01)
Sequence	ATGGCAATGGCCACCGCCACCGCCTCCTCCTGCGTCGACGCCACGTGGTGGGCGTACGCC CTCCCGGCGCTCCTCGGCGCCGACACCCTCTGCGCCCACCCGGCGCTGCTCGCCGGCGCC GTCCTCCTGGCCTTCGCCACCGCCGCGGTGCTCGCCTGGGCCGCGTCCCCCGGCGGGCCG GCGTGGGCGCACGGCCGCGGCCGCCTCGGCGCGACGCCCATCGAGGGGCCCCGGGGGCTC CCCGTGTTCGGCAGCATCTTCGCGCTCTCCCGGGGCCTCCCGCACCGCGCGCTCGACGCG ATGTCGCGCGACGCGGCGGCGCCACGGGCGAGGGAGCTCATGGCGTTCTCCGTCGGGGAG ACGCCGGCGGTGGTGTCGTCGTGCCCGGCGACGGCGAGGGAGGTGCTCGCGCACCCGTCG TTCGCCGACCGCCCGCTGAAGCGCTCGGCGCGGGAGCTGCTGTTCGCGCGCGCCATCGGG TTCGCCCCCAGCGGCGAGTACTGGCGCCTCCTCCGCCGCATCGCCTCCACCCACCTCTTC TCCCCTCGCCGCGTCGCCGCGCACGAGCCGGGGCGCCAGGCCGACGCCACGGCGATGCTG TCCGCCATGGCCGCCGAGCAGTCCGCCACCGGCGCCGTCGTGCTCCGCCCCCACCTCCAG GCCGCCGCGCTCAACAACATCATGGGCAGCGTGTTCGGCCGGCGCTACGACGTCTCCTCC TCCTCCGGCGCCGCCGCCGACGAGGCCGAGCAGCTCAAGAGCATGGTGCGCGAGGGGTTC GAGCTCCTCGGCGCGTTCAACTGGTCCGACCACCTCCCATGGCTCGCCCACCTCTACGAC CCCAACCACGTCGCCCGCCGCTGCGCCGCGCTCGTCCCCCGCGTCCAGGCGTTCGTCCGC GGCGTCATCCGCGACCACCGCCTCCGCCGCGACTCCTCCTCCACCGCCGCCGACAATGCC GACTTCGTCGACGTCCTCCTCTCCCTCGAGGCCCACGAGAACCTCGCCGAGGACGACATG GTCGCCGTCCTCTGGGAGATGATATTTCGTGGGACGGACACGACGGCGTTGGTGACGGAG TGGTGCATGGCGGAGGTGGTGAGGAACCCGGCGGTGCAGGCGAGGCTGAGGGCGGAGGTG GACGCGGCGGTGGGCGGCGACGGGTGTCCCAGCGACGGCGACGTGGCGCGGATGCCGTAC CTGCAGGCGGTGGTGAAGGAGACGCTGAGGGCGCACCCGCCGGGGCCGCTGCTGAGCTGG GCGCGGCTGGCCACCGCCGACGTGGGGCTCGCCAACGGCATGGTGGTGCCGGCGGGCACG ACGGCGATGGTGAACATGTGGGCCATCACCCACGACGGCGAGGTGTGGGCCGACCCGGAG GCGTTCGCGCCGGAGCGGTTCATCCCGTCGGAGGGCGGCGCCGACGTCGACGTCCGCGGC GGCGACCTCCGCCTGGCGCCGTTCGGCGCCGGGCGCCGCGTCTGCCCCGGCAAGAACCTC GGCCTCGCCACCGTCACCCTCTGGGTCGCCCGCCTCGTCCACGCCTTCGACTGGTTCCTC CCCGACGGCTCGCCGCCGGTGTCCCTCGACGAGGTCCTCAAGCTCTCCCTCGAGATGAAG ACCCCTCTCGCCGCCGCCGCCACCCCCCGCCGCCGCCGCGCCGCCTGA