Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0402200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13600900:13606431:-1 gene:Os10g0402200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORIGIN RECOGNITION COMPLEX 3 description:Origin recognition complex subunit 3, Lateral root development (Os10t0402200-01)
Sequence	ATGGCTGCGCCGCCCGGTGAGGCTCCGCTCACCGCCGCCACCAACATCGAGCCGTTCTAT GTCCTCCACAAGGGCGGCGCCGCTGCCTCGTCGTCCTCCTCGTCGGCTCCCTCGCTGCCG TCGTCCGGCCGGGCGCGCCGCCGGATCGACGTTTCCGGGCTGGCATCTCCCAACCCCAAA CCCGGGAAGAGATCCCGCGACGACGACGCCGCTGAGGACGACGACGACGACGAGCTGTAC GAGCGGCTCCGCCTCGACGCCTTCCACCGCGTTTGGTCCAAGATCCAGTCCACCATCAAT GAGGTTCTTCGGGGGATCAGCCTCAAGCTGTTCGACCAGGTGCTGCGATGGGTGCAGGAA TCCTTCTCCGCAGTCCGCTCCATTGCGAGACCTTCCGCAGCCGAGGTGCGGCAGCCATAC CCTCTCCTCACCGATGTGATCTGCAGGAAGATACCGACGGCTTTTGTTCTCACCAAGAAT GCGGAGTTCGTTGACGACATCACGACATTCCGGGATCTTGCAGAGTATCTTGAGTCCAAT GGATGTCACCTGGCCAAGCTGTCGGCGACTGAATTATCGGAAAAAAATGGAGTTGGTTGT TGCTTCAGGAGCTTGTTGAGGCAGCTACTTTCAGATGTTCCAGATGTAGCGGATATATTT GCACTTGCATCTTGGTACTCTGCAGCTGAGAACTATGATCAGCCTATAGTCGTCGTAATT GATGATTTAGAGCAATGCTCTGGTGATGTCCTGGGAGAGCTTGTGATGATGCTAAGCGAG TGGGTGATTAAAATTCCCATCTTCTTTGTGATGGGGATTGCAACCACCCTTGACGCACCA AGGAAACTACTCTCATCAGAAGATCTTCAAAGATTAGAGCCGTGCAAGCTGACCTTGGGG TCTCCTTCTGATAGAATGAACGCACTTGTTGAGGCTATCCTTGTCAAACCATGTGCTGGA TTCTGTATCAGTCATGAAGTTGCAGTTTTCCTTAGAAATTACTTTTTCAAGCATGATGGG ACCATAACATCTTTTATTAGTGCTCTCAAGCTTGCTTGTAGTAAGCACTTCTCTGTCGAA CCTCTGAGCTTCTTGTGCATGGGAATGCTTGAAGAGGATCGTGAGAACTTCTGGCATGAT AAGTTTAATGCACTACCCCAAGAATTGCGGAAATATGCATCTGGTCTCCCGTCATGCACA AGGGAAAAGGACTCAACCAAGTCTGGCGACAATATGGTTGACGGGTTGTCTGAGCTTATG AATATTCAAAAAGATTGGAGTTCAGTTCTCTTGTGCTTGTATGAAGCTGGAAAACATGGT AAAGTGCAACTTTTGGATATTTTCTGTGAGGCTGTAAACCCTGACCTGCACACTCAGAAG GCACCCAATCTACCAAATGAGAAGTCAGGAACTAGTAGAAGATTTATAGATCAGGTGATG GATACAATAAGGTACCTTCCAGTGGAAACACTATTTTGTCTTCTAGAAGTTTGGAGCATC CATCTAAACGGGATGGATAAGATAACAAACAAGGTGAAAGAGCTTCAGTCCACCACAATC AGTACAGACAGTGTGAGGATCACAAAGGATAAGTGGCCTAGGAGATCAACAAATAGTACT GGAAATAGTACAGTAGCACTGAATGATAAAGTGGCTATGCTGTTGGATGATGTTACCAGG AAATTTCTGGTCTCTGTTGAGTGTTTACCTTTTCATGAAATCGTCTGTTTCAAGAATGTT AGCATTCTTCAATCTGCTTTAATTGGAAATCCGAGAAGAATGGTCCAGCTTGATCTAGTC AAGTCACACAAACATCTTAAATGCTCTTGCTGCAGGAAGAATGGAATTGCTGTGTTGGCA TCCATGCATGATACATCAATTATGTGCAATCTAGCCCAAGAATATGGTGATGTAATCAAC CTTCATGACTGGTACATATCTTTCGATGGCATTATCAATAGCGTGCATTCAAAAATCAAA AGGAAACCGCACACATCTCCCTCGAAAAAGAAATCAAAACCCGTTGCTGCGGAGAGTGAA GCCATGATCCAAGCAAGGTTTTGCAGAGCTGTCACCGAGCTACAGATCACCGGACTTCTT CGGATGCCGAGCAAGAGAAGGCCAGATCTTGTGCAGAGAATCGCATTCGGCCTTTGA

Peptide Sequence

PEP ID	Os10t0402200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13600900:13606431:-1 gene:Os10g0402200 transcript:Os10t0402200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORIGIN RECOGNITION COMPLEX 3 description:Origin recognition complex subunit 3, Lateral root development (Os10t0402200-01)
Sequence	MAAPPGEAPLTAATNIEPFYVLHKGGAAASSSSSSAPSLPSSGRARRRIDVSGLASPNPK PGKRSRDDDAAEDDDDDELYERLRLDAFHRVWSKIQSTINEVLRGISLKLFDQVLRWVQE SFSAVRSIARPSAAEVRQPYPLLTDVICRKIPTAFVLTKNAEFVDDITTFRDLAEYLESN GCHLAKLSATELSEKNGVGCCFRSLLRQLLSDVPDVADIFALASWYSAAENYDQPIVVVI DDLEQCSGDVLGELVMMLSEWVIKIPIFFVMGIATTLDAPRKLLSSEDLQRLEPCKLTLG SPSDRMNALVEAILVKPCAGFCISHEVAVFLRNYFFKHDGTITSFISALKLACSKHFSVE PLSFLCMGMLEEDRENFWHDKFNALPQELRKYASGLPSCTREKDSTKSGDNMVDGLSELM NIQKDWSSVLLCLYEAGKHGKVQLLDIFCEAVNPDLHTQKAPNLPNEKSGTSRRFIDQVM DTIRYLPVETLFCLLEVWSIHLNGMDKITNKVKELQSTTISTDSVRITKDKWPRRSTNST GNSTVALNDKVAMLLDDVTRKFLVSVECLPFHEIVCFKNVSILQSALIGNPRRMVQLDLV KSHKHLKCSCCRKNGIAVLASMHDTSIMCNLAQEYGDVINLHDWYISFDGIINSVHSKIK RKPHTSPSKKKSKPVAAESEAMIQARFCRAVTELQITGLLRMPSKRRPDLVQRIAFGL

Transcript Sequence

Transcript ID	Os10t0402200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13600900:13606431:-1 gene:Os10g0402200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ORIGIN RECOGNITION COMPLEX 3 description:Origin recognition complex subunit 3, Lateral root development (Os10t0402200-01)
Sequence	ATGGCTGCGCCGCCCGGTGAGGCTCCGCTCACCGCCGCCACCAACATCGAGCCGTTCTAT GTCCTCCACAAGGGCGGCGCCGCTGCCTCGTCGTCCTCCTCGTCGGCTCCCTCGCTGCCG TCGTCCGGCCGGGCGCGCCGCCGGATCGACGTTTCCGGGCTGGCATCTCCCAACCCCAAA CCCGGGAAGAGATCCCGCGACGACGACGCCGCTGAGGACGACGACGACGACGAGCTGTAC GAGCGGCTCCGCCTCGACGCCTTCCACCGCGTTTGGTCCAAGATCCAGTCCACCATCAAT GAGGTTCTTCGGGGGATCAGCCTCAAGCTGTTCGACCAGGTGCTGCGATGGGTGCAGGAA TCCTTCTCCGCAGTCCGCTCCATTGCGAGACCTTCCGCAGCCGAGGTGCGGCAGCCATAC CCTCTCCTCACCGATGTGATCTGCAGGAAGATACCGACGGCTTTTGTTCTCACCAAGAAT GCGGAGTTCGTTGACGACATCACGACATTCCGGGATCTTGCAGAGTATCTTGAGTCCAAT GGATGTCACCTGGCCAAGCTGTCGGCGACTGAATTATCGGAAAAAAATGGAGTTGGTTGT TGCTTCAGGAGCTTGTTGAGGCAGCTACTTTCAGATGTTCCAGATGTAGCGGATATATTT GCACTTGCATCTTGGTACTCTGCAGCTGAGAACTATGATCAGCCTATAGTCGTCGTAATT GATGATTTAGAGCAATGCTCTGGTGATGTCCTGGGAGAGCTTGTGATGATGCTAAGCGAG TGGGTGATTAAAATTCCCATCTTCTTTGTGATGGGGATTGCAACCACCCTTGACGCACCA AGGAAACTACTCTCATCAGAAGATCTTCAAAGATTAGAGCCGTGCAAGCTGACCTTGGGG TCTCCTTCTGATAGAATGAACGCACTTGTTGAGGCTATCCTTGTCAAACCATGTGCTGGA TTCTGTATCAGTCATGAAGTTGCAGTTTTCCTTAGAAATTACTTTTTCAAGCATGATGGG ACCATAACATCTTTTATTAGTGCTCTCAAGCTTGCTTGTAGTAAGCACTTCTCTGTCGAA CCTCTGAGCTTCTTGTGCATGGGAATGCTTGAAGAGGATCGTGAGAACTTCTGGCATGAT AAGTTTAATGCACTACCCCAAGAATTGCGGAAATATGCATCTGGTCTCCCGTCATGCACA AGGGAAAAGGACTCAACCAAGTCTGGCGACAATATGGTTGACGGGTTGTCTGAGCTTATG AATATTCAAAAAGATTGGAGTTCAGTTCTCTTGTGCTTGTATGAAGCTGGAAAACATGGT AAAGTGCAACTTTTGGATATTTTCTGTGAGGCTGTAAACCCTGACCTGCACACTCAGAAG GCACCCAATCTACCAAATGAGAAGTCAGGAACTAGTAGAAGATTTATAGATCAGGTGATG GATACAATAAGGTACCTTCCAGTGGAAACACTATTTTGTCTTCTAGAAGTTTGGAGCATC CATCTAAACGGGATGGATAAGATAACAAACAAGGTGAAAGAGCTTCAGTCCACCACAATC AGTACAGACAGTGTGAGGATCACAAAGGATAAGTGGCCTAGGAGATCAACAAATAGTACT GGAAATAGTACAGTAGCACTGAATGATAAAGTGGCTATGCTGTTGGATGATGTTACCAGG AAATTTCTGGTCTCTGTTGAGTGTTTACCTTTTCATGAAATCGTCTGTTTCAAGAATGTT AGCATTCTTCAATCTGCTTTAATTGGAAATCCGAGAAGAATGGTCCAGCTTGATCTAGTC AAGTCACACAAACATCTTAAATGCTCTTGCTGCAGGAAGAATGGAATTGCTGTGTTGGCA TCCATGCATGATACATCAATTATGTGCAATCTAGCCCAAGAATATGGTGATGTAATCAAC CTTCATGACTGGTACATATCTTTCGATGGCATTATCAATAGCGTGCATTCAAAAATCAAA AGGAAACCGCACACATCTCCCTCGAAAAAGAAATCAAAACCCGTTGCTGCGGAGAGTGAA GCCATGATCCAAGCAAGGTTTTGCAGAGCTGTCACCGAGCTACAGATCACCGGACTTCTT CGGATGCCGAGCAAGAGAAGGCCAGATCTTGTGCAGAGAATCGCATTCGGCCTTTGA