Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0400900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13543442:13552221:1 gene:Os10g0400900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-01);Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-02)
Sequence	ATGCAAGGAGGTTTGGGTAGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCT CTACGATGTGACATACCAGACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTT ATCGCTCCAACTGCTGATCGGATATTATACTGGAAGATAGTTCCATCTACTCCAGCTGGA CCTCCGAACTCTGATCCTGTAAATGATGGACCTGTTTTATCAGTTCGATATTCCCTGGAT CTGAAAGCCATAGGGATACAACGATCCAATCATGAGGTTGAATTTATAAATAGGGAAACA GGACAAACCTGTAATAAAAAGTGCAGAGCTGATTCTGAAACTATACTTGGCTTTTTTTGG ACAGACTGCCCCACTTGTGATGTCATAATAATAAAAACAAGTGGCCTGGATCTGTTTGCT TATGAACCTCAATCAAATGCTCTTCACTTGGTAGACTCAAAGAAGATCAATGTGAGCTGG TATTTTTACACTCATGAAAGTAGGTTGATTCTTCTTGCTTCAGGAATGCAATGCACACTA TTTACTGGATATCAGTTTTCTGCTGGTGGGATTGTCAAATTGCCTAAGTTTGAGATGACA ATGACTAAAAGTGAAGCAAACAACAAACCTGTTCTAGCTGCTGATGATGTTCATACCGTA ACAGTCTATGGTAGGATTTATTGCTTGCAGCTTGACAGAGTTAGTATGACATTGAACTTG TATCGTTTCTACCGTGATGCTGTTGTACAACAGGGTACTCTGCCAACTTATTCAAGTAGA ATTGCAGTTAGTGCGGTTGACAACATAATCATGGTTCACCAAATAGATGCAAAGGTTGTC ATACTATATGATGTTTTTATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTT GTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGT GCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGT GATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGT ACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATG GTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACT ATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGA GGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCC GGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAA GTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCA TCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCA CAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCA CATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTT GAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGA AGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTG CTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAA CCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGG AAGCTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTA CTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACT GTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCC GCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGC AGATACCGGCATATCTTGTCTGAGATGATCTGA

Peptide Sequence

PEP ID	Os10t0400900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13543442:13552221:1 gene:Os10g0400900 transcript:Os10t0400900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-01);Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-02)
Sequence	MQGGLGSPGALSHAYVQHPPLRCDIPDIRGLFYDDANKFLIAPTADRILYWKIVPSTPAG PPNSDPVNDGPVLSVRYSLDLKAIGIQRSNHEVEFINRETGQTCNKKCRADSETILGFFW TDCPTCDVIIIKTSGLDLFAYEPQSNALHLVDSKKINVSWYFYTHESRLILLASGMQCTL FTGYQFSAGGIVKLPKFEMTMTKSEANNKPVLAADDVHTVTVYGRIYCLQLDRVSMTLNL YRFYRDAVVQQGTLPTYSSRIAVSAVDNIIMVHQIDAKVVILYDVFMDSYAPISAPLPLL VRGLPSNNKQSAQPPDSQSSAYGGTLYGEGWSFLIPDLVCDVENGLLWKLHLDLEAIAAS TSDAPLILEFLQRRKSDPSMVKTLSLAIVRTIILERRPITMVAKAMDVVLDSYSRLMKMG GGLPAVRRTSEQNQQPGVQPGVNPDSASGDGNRPVQSNSEVEHGIANLAEHVDRTLLNTS SDSDDIIDASGASDAPDRKPQVLGQDSRPLASGTSTQHGSHVASVAVSPSEMFESVFVLV EDEMMADPAYLISIIMEFLRSVSRAGLKAPPNLFVMMTTLLARSNRYPEIALFVSNKILE PSKELAMQLMELGQQHSPTRKLGVDMLRERGLHHDYVTALLQDGYHLEALRYARKYKVIT VQPVLFLEKAVAINSAQNLAAMLSFFSEFTPTFKTTSDYGRYRHILSEMI

Transcript Sequence

Transcript ID	Os10t0400900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13543442:13552221:1 gene:Os10g0400900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-01);Similar to Colon cancer-associated protein Mic1-like containing protein, expressed. (Os10t0400900-02)
Sequence	CCGATTCCCCAAACCTCTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTC CCCTCCCCACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGC CCGGGAGCGGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGAT CCGGCCGGAGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGGCC CGGATCCTCGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAG GTCCCTGAGATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATG CAGACTGTGGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATAT TTGTTGCTTTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGT AGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACATACCA GACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCCAACTGCTGAT CGGATATTATACTGGAAGATAGTTCCATCTACTCCAGCTGGACCTCCGAACTCTGATCCT GTAAATGATGGACCTGTTTTATCAGTTCGATATTCCCTGGATCTGAAAGCCATAGGGATA CAACGATCCAATCATGAGGTTGAATTTATAAATAGGGAAACAGGACAAACCTGTAATAAA AAGTGCAGAGCTGATTCTGAAACTATACTTGGCTTTTTTTGGACAGACTGCCCCACTTGT GATGTCATAATAATAAAAACAAGTGGCCTGGATCTGTTTGCTTATGAACCTCAATCAAAT GCTCTTCACTTGGTAGACTCAAAGAAGATCAATGTGAGCTGGTATTTTTACACTCATGAA AGTAGGTTGATTCTTCTTGCTTCAGGAATGCAATGCACACTATTTACTGGATATCAGTTT TCTGCTGGTGGGATTGTCAAATTGCCTAAGTTTGAGATGACAATGACTAAAAGTGAAGCA AACAACAAACCTGTTCTAGCTGCTGATGATGTTCATACCGTAACAGTCTATGGTAGGATT TATTGCTTGCAGCTTGACAGAGTTAGTATGACATTGAACTTGTATCGTTTCTACCGTGAT GCTGTTGTACAACAGGGTACTCTGCCAACTTATTCAAGTAGAATTGCAGTTAGTGCGGTT GACAACATAATCATGGTTCACCAAATAGATGCAAAGGTTGTCATACTATATGATGTTTTT ATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGC AATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTC TATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTC TTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTG ATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTT GCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATG GATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTT AGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCA GCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCT AACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATT ATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGAT AGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCA GTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCT GATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGG TTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGT TATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCG ATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAGCTGGGCGTGGACATG CTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCAC CTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTC TTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTC TCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTG TCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCAC GTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACG ATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGAT GAACGAATTCGAGTTTCTGCGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAA TCCATGACTTGCAATGTGGTGGGTCTTTTTTCTGAAAGCTTATCGTATTTATTGTGGAAA TTCTGAAAACTCTTCATGTGAAATTCCTCACTTGGATGGGGTATGAGATCAAGTGTCCCT GGCATGTAGGTCCAAGCCAAGTATGCAGAAGAGGTCACTGTCGGATGGGGTGAGGAGTGG GGAATGTTTAATTTAGGTGTTTTTTTTCTTTTTTTGCAGGGTTTTTTTTCTTTTTATAAA GACTCTCATTTATTGCCTATATTTACTAATAAGATAAAACGGTTTATT