Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0400800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13537546:13542435:-1 gene:Os10g0400800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS) (CML33). (Os10t0400800-01);Similar to Phenylalanyl-tRNA synthetase alpha chain. (Os10t0400800-02)
Sequence	ATGGCGGATGTGGAGGCCTGCCTCCTCGCCCACCTCAACTCCGGCGGCGAGGTGCCGGAC TCCCGCTCCTACGCCTCCTCCCTCCGCGTCACCCACGACGAGCTCGAGGCCGTCATCAAG AGCCTCTCGGCTTTCCGCATTGTCGACACCACGGACATCACCAAGGAGACGTGGGTGCTA ACCGATGAAGCTAAGGGGTACGTCGCGGGTGGCTCCCCCGAAGCGCAGCTCGTCGCTGCA ATCCCACCGGAGGGTGCCTCCAAGGACGTGCTCAGGGAGAAATTGGGATCTGTCTTTGAC ATCGGCATGAAGACGGCTGCGAAGAACAAGTGGATTGGTTTTGAGAAAGGGAATAAGGAC TTGGTGTTGAGAAAGGTTAACACCATCAAGGATGACTTGCAAGAGCAACTGAAAAGTCTA GAGAGTGGAGAGGTTCTTTCTGACAAGGTGATTGATGATTTGAAAAGAAGAAAGCTTATC ACAAAAGAGAAATCAATTTGGTATGCCCTAAAGAAAGGACCCCAGTTTGTCGCGAAGAGG AAAAAACTGGCAACTGATGTGACACAAGAGCATCTCAGAAGTGGTGATTGGAAGGATCTT GAATTCAAAGACTATAACTTTGGAGCCCAGGGACAACCTATTGCCATTGGTTATGTGCAA CCTTTGTTGGAGGTGCGAGAGGAAATCCAGAACATCTTTCTTCAGATGGGGTTCACTGAG ATGCCAACTAACAATTACGTTGAGAGCAGCTTCTGGAACTTCGATGCACTGTTCCAGCCC CAACAGCATCCTGCTCGGGATTCACACGATACATTTTTTCTTGAAGCCCCTGCCGCTACA AAACAATTGCCTGAAGATTATCTTGAGAAAGTAAAGGAAGTTCATCAACGTGGTGGTTAT GGCTCCAAGGGATATGGCTATGACTGGAAACGGGATGAAGCAGAGAAAAACCTGCTTCGT ACCCACACTACAGCAGTTTCAACAAGGATGCTATACAAGCTAGCACAAGAGAAACCTTTT GCCCCTAAGAGGTACTACTCCATTGATCGTGTTTTCCGCAATGAAGCTGTGGACCGGACT CATCTTGCGGAATTCCACCAGATTGAAGGTCTCATTTGTGATTATGGTTTGACGCTGGGT GATCTGATTGGTGTATTGGAGGATTTCTTCTCGAGTCTAGGCATGTCAAAGCTGCGTTTC AAGCCTGCCTACAATCCATACACCGAGCCGAGCATGGAAATTTTCAGTTACCATGAAGGT TTGAAGAAATGGGTGGAAGTTGGTAACTCTGGCATGTTCAGACCTGAAATGTTACTTCCC ATGGGACTGCCAGAGGGTGTTAATGTTATTGCATGGGGTCTTTCACTAGAAAGGCCAACA ATGATTCTTTACGGCATCGACAACATTCGAGACCTCTTTGGACCAAAGGTTGATTTCAAC CTCATCAAGAGCAACCCTCTCTGCCGCTTGGGACTGCAGTAA

Peptide Sequence

PEP ID	Os10t0400800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13537546:13542435:-1 gene:Os10g0400800 transcript:Os10t0400800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS) (CML33). (Os10t0400800-01);Similar to Phenylalanyl-tRNA synthetase alpha chain. (Os10t0400800-02)
Sequence	MADVEACLLAHLNSGGEVPDSRSYASSLRVTHDELEAVIKSLSAFRIVDTTDITKETWVL TDEAKGYVAGGSPEAQLVAAIPPEGASKDVLREKLGSVFDIGMKTAAKNKWIGFEKGNKD LVLRKVNTIKDDLQEQLKSLESGEVLSDKVIDDLKRRKLITKEKSIWYALKKGPQFVAKR KKLATDVTQEHLRSGDWKDLEFKDYNFGAQGQPIAIGYVQPLLEVREEIQNIFLQMGFTE MPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLEAPAATKQLPEDYLEKVKEVHQRGGY GSKGYGYDWKRDEAEKNLLRTHTTAVSTRMLYKLAQEKPFAPKRYYSIDRVFRNEAVDRT HLAEFHQIEGLICDYGLTLGDLIGVLEDFFSSLGMSKLRFKPAYNPYTEPSMEIFSYHEG LKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAWGLSLERPTMILYGIDNIRDLFGPKVDFN LIKSNPLCRLGLQ

Transcript Sequence

Transcript ID	Os10t0400800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13537546:13542435:-1 gene:Os10g0400800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase alpha chain) (PheRS) (CML33). (Os10t0400800-01);Similar to Phenylalanyl-tRNA synthetase alpha chain. (Os10t0400800-02)
Sequence	GAGGGGCTTTTTCGCAAAACAACGTCAACTAACCCACACACACCACCCTCAAACCCTAGC CGCCGCCGCCGACTCCCCCTCGCGCCGTCCCCGTCGCCGAGCGCCGCCGCCTCCGTCAAG CCCAAGCCCAGTAGTCCACTCCCAGGCAGCTCTCCCCTCTCGCCGCCATGGCGGATGTGG AGGCCTGCCTCCTCGCCCACCTCAACTCCGGCGGCGAGGTGCCGGACTCCCGCTCCTACG CCTCCTCCCTCCGCGTCACCCACGACGAGCTCGAGGCCGTCATCAAGAGCCTCTCGGCTT TCCGCATTGTCGACACCACGGACATCACCAAGGAGACGTGGGTGCTAACCGATGAAGCTA AGGGGTACGTCGCGGGTGGCTCCCCCGAAGCGCAGCTCGTCGCTGCAATCCCACCGGAGG GTGCCTCCAAGGACGTGCTCAGGGAGAAATTGGGATCTGTCTTTGACATCGGCATGAAGA CGGCTGCGAAGAACAAGTGGATTGGTTTTGAGAAAGGGAATAAGGACTTGGTGTTGAGAA AGGTTAACACCATCAAGGATGACTTGCAAGAGCAACTGAAAAGTCTAGAGAGTGGAGAGG TTCTTTCTGACAAGGTGATTGATGATTTGAAAAGAAGAAAGCTTATCACAAAAGAGAAAT CAATTTGGTATGCCCTAAAGAAAGGACCCCAGTTTGTCGCGAAGAGGAAAAAACTGGCAA CTGATGTGACACAAGAGCATCTCAGAAGTGGTGATTGGAAGGATCTTGAATTCAAAGACT ATAACTTTGGAGCCCAGGGACAACCTATTGCCATTGGTTATGTGCAACCTTTGTTGGAGG TGCGAGAGGAAATCCAGAACATCTTTCTTCAGATGGGGTTCACTGAGATGCCAACTAACA ATTACGTTGAGAGCAGCTTCTGGAACTTCGATGCACTGTTCCAGCCCCAACAGCATCCTG CTCGGGATTCACACGATACATTTTTTCTTGAAGCCCCTGCCGCTACAAAACAATTGCCTG AAGATTATCTTGAGAAAGTAAAGGAAGTTCATCAACGTGGTGGTTATGGCTCCAAGGGAT ATGGCTATGACTGGAAACGGGATGAAGCAGAGAAAAACCTGCTTCGTACCCACACTACAG CAGTTTCAACAAGGATGCTATACAAGCTAGCACAAGAGAAACCTTTTGCCCCTAAGAGGT ACTACTCCATTGATCGTGTTTTCCGCAATGAAGCTGTGGACCGGACTCATCTTGCGGAAT TCCACCAGATTGAAGGTCTCATTTGTGATTATGGTTTGACGCTGGGTGATCTGATTGGTG TATTGGAGGATTTCTTCTCGAGTCTAGGCATGTCAAAGCTGCGTTTCAAGCCTGCCTACA ATCCATACACCGAGCCGAGCATGGAAATTTTCAGTTACCATGAAGGTTTGAAGAAATGGG TGGAAGTTGGTAACTCTGGCATGTTCAGACCTGAAATGTTACTTCCCATGGGACTGCCAG AGGGTGTTAATGTTATTGCATGGGGTCTTTCACTAGAAAGGCCAACAATGATTCTTTACG GCATCGACAACATTCGAGACCTCTTTGGACCAAAGGTTGATTTCAACCTCATCAAGAGCA ACCCTCTCTGCCGCTTGGGACTGCAGTAAAACCTTGCAAAAGTTGGTTGGAAGTGATTAA GTAACAAGATTTGTTTAGTTGATCAGTGGTTGAACGTGAAGAGATCATTTCTGGCTTACC TTGAAACACCAATACATGTGCATTTAGCAGAGGTTTTTGTATTACAGTTTTGAGTGATAT GAGACTACCAGCCAATTTTTGTGTGTGTCCATATTCGAATACTTTGATACATTTTAATTG AGCACATCCAATGTATGAAGTGGTCATCTGCCGCTGCGGTTGCTTGAATCAAAATATGGA CCATTGTTTTCTTTTCTTTGACAAACTTGGCGCTCCAAAAACTGTTGTTGAGAAGTGTCA TCAAACAGGATGTAATAGTTATGATACTGATCTAAGATTAATAATATCTGCTGAAGCTGA TGCCTTTCACACCTC