Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0400500-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:13524417:13525925:-1 gene:Os10g0400500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed. (Os10t0400500-00)
Sequence	ATGGGTAGCTTGCCACTCGACGCGCTCCAGCCACTGGACCCGGACACCTTCGCCGCCGAC TCCTCCGCCGTCGTCGACTTCCTCGCCGGCTACTACCGCGACGTCGACAAGTACCCCGTC CGCGCCGCCGACCTCGAGCCTGGCCGCCTCCGCAGGCTCCTCCCGGAGGCCGCGCCGGAG TTCGGGGAGCCGGCGGAGCGGATCCTCGCTGACGTGCGCCGCGACGTGCTCCCGGGGCTC ACGCACTGGCAGAGCCCCAGCTTCTTCGCCTACTTCCCGATGAACGCCAGCGCCGCCGGG TTCGCCGGCGAGATGCTCTCCGTGGGGCTCAACGTCGTGCCGTTCATGTGGGTTGCGTCG CCGGCTGCCGTGGAGCTGGAGGCCGTCGTGGTGGACTGGATGGCTAGGCTGGTGGGCTTG CCTGATCGCTTCCTCTTCTCCGGCTCCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGTT CTGCAGGGGAGCACCTGCGAGGCCGTGGTGTGCACGCTCGCCGCCGCGCGGGACCGCGCG CTGGGGAGGATTGGGCACGAGGGCATCGTGAAGCTGGTGGTGTACGCCTCCGACCAGACG CACGCCACGTTCCAGAAGGGCGCGCGGCTGGTCGGCATCACGCCGGCGAACTTCCGCGTC GTCCCGACGGCGGCGGCGTCGGGGTACGCGCTGACGGGCGCCGCCGTGCGCGCCGCGGTG GAGGGCGACGTGGCGCGCGGGCTGGTCCCGCTGTACCTGTGCGCCACTGTGGGCACCACG GGGATCGGCGCCGTCGACCCCGTCCGCGAGCTCGGCGAGGTGGCGCGCCGCCACGGCATG TGGCTCCACGTCGACGCCGCGTACGCCGGCAGCGCGGCGATCTGCCCGGAGTACCAGGGC TACCTCGACGGCGCCGAGCTCGCCGACTCGGTGAGCATGAACCCGCACAAGTGGTTCCTC ACCAACATGGACTGCTGCTGCCTCTGGGTGGCGAGCCCCGCCGCGCTCACCGCCGCGCTG TCCACCGACCCGGAGTACCTCAAGAACGCCGGCGGCGGGAAGCCCCAGGCCGCCGCCGGC GCCGGCGCCATCGACTACAAGGACTGGCAGATCTCGCTGTCGCGGCGGTTCCGCGCCATG AAGCTCTGGTTCGTGCTGCGGCGGTACGGCGCTGCGGGCATGCGCGCGCACATCCGGCGC CACGTCGCCATGGCCGAGTGGTTCGAGCGCGCGGTGAGCGCCGACGAGCGGTTCGAGGTG GTGGCGAAGAGGAGGTTCTCCCTCGTGTGCTTCCGCCTCCGCGGCGGCGGCGGCGGCGGC GACGCGATGAACCGCGAGCTCCTGGCGGCGGTGAACGCGAGCGGGCGGGCGTTCATGACG CACTTCGTGGTGGAGGGCAAGTTCGTGATCCGGCTCGCCGTCGGCGGCGCCATGACGGAG ATGAGGCATGTCGGCGACGCGTGGGAGCTGGTGCAGCGCACGGCGGAGCAGCTGCTGCAG CGCCGGTAG

Peptide Sequence

PEP ID	Os10t0400500-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:13524417:13525925:-1 gene:Os10g0400500 transcript:Os10t0400500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed. (Os10t0400500-00)
Sequence	MGSLPLDALQPLDPDTFAADSSAVVDFLAGYYRDVDKYPVRAADLEPGRLRRLLPEAAPE FGEPAERILADVRRDVLPGLTHWQSPSFFAYFPMNASAAGFAGEMLSVGLNVVPFMWVAS PAAVELEAVVVDWMARLVGLPDRFLFSGSGGGGGGGGGGVLQGSTCEAVVCTLAAARDRA LGRIGHEGIVKLVVYASDQTHATFQKGARLVGITPANFRVVPTAAASGYALTGAAVRAAV EGDVARGLVPLYLCATVGTTGIGAVDPVRELGEVARRHGMWLHVDAAYAGSAAICPEYQG YLDGAELADSVSMNPHKWFLTNMDCCCLWVASPAALTAALSTDPEYLKNAGGGKPQAAAG AGAIDYKDWQISLSRRFRAMKLWFVLRRYGAAGMRAHIRRHVAMAEWFERAVSADERFEV VAKRRFSLVCFRLRGGGGGGDAMNRELLAAVNASGRAFMTHFVVEGKFVIRLAVGGAMTE MRHVGDAWELVQRTAEQLLQRR

Transcript Sequence

Transcript ID	Os10t0400500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13524417:13525925:-1 gene:Os10g0400500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyridoxal-dependent decarboxylase conserved domain containing protein, expressed. (Os10t0400500-00)
Sequence	ATGGGTAGCTTGCCACTCGACGCGCTCCAGCCACTGGACCCGGACACCTTCGCCGCCGAC TCCTCCGCCGTCGTCGACTTCCTCGCCGGCTACTACCGCGACGTCGACAAGTACCCCGTC CGCGCCGCCGACCTCGAGCCTGGCCGCCTCCGCAGGCTCCTCCCGGAGGCCGCGCCGGAG TTCGGGGAGCCGGCGGAGCGGATCCTCGCTGACGTGCGCCGCGACGTGCTCCCGGGGCTC ACGCACTGGCAGAGCCCCAGCTTCTTCGCCTACTTCCCGATGAACGCCAGCGCCGCCGGG TTCGCCGGCGAGATGCTCTCCGTGGGGCTCAACGTCGTGCCGTTCATGTGGGTTGCGTCG CCGGCTGCCGTGGAGCTGGAGGCCGTCGTGGTGGACTGGATGGCTAGGCTGGTGGGCTTG CCTGATCGCTTCCTCTTCTCCGGCTCCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGTT CTGCAGGGGAGCACCTGCGAGGCCGTGGTGTGCACGCTCGCCGCCGCGCGGGACCGCGCG CTGGGGAGGATTGGGCACGAGGGCATCGTGAAGCTGGTGGTGTACGCCTCCGACCAGACG CACGCCACGTTCCAGAAGGGCGCGCGGCTGGTCGGCATCACGCCGGCGAACTTCCGCGTC GTCCCGACGGCGGCGGCGTCGGGGTACGCGCTGACGGGCGCCGCCGTGCGCGCCGCGGTG GAGGGCGACGTGGCGCGCGGGCTGGTCCCGCTGTACCTGTGCGCCACTGTGGGCACCACG GGGATCGGCGCCGTCGACCCCGTCCGCGAGCTCGGCGAGGTGGCGCGCCGCCACGGCATG TGGCTCCACGTCGACGCCGCGTACGCCGGCAGCGCGGCGATCTGCCCGGAGTACCAGGGC TACCTCGACGGCGCCGAGCTCGCCGACTCGGTGAGCATGAACCCGCACAAGTGGTTCCTC ACCAACATGGACTGCTGCTGCCTCTGGGTGGCGAGCCCCGCCGCGCTCACCGCCGCGCTG TCCACCGACCCGGAGTACCTCAAGAACGCCGGCGGCGGGAAGCCCCAGGCCGCCGCCGGC GCCGGCGCCATCGACTACAAGGACTGGCAGATCTCGCTGTCGCGGCGGTTCCGCGCCATG AAGCTCTGGTTCGTGCTGCGGCGGTACGGCGCTGCGGGCATGCGCGCGCACATCCGGCGC CACGTCGCCATGGCCGAGTGGTTCGAGCGCGCGGTGAGCGCCGACGAGCGGTTCGAGGTG GTGGCGAAGAGGAGGTTCTCCCTCGTGTGCTTCCGCCTCCGCGGCGGCGGCGGCGGCGGC GACGCGATGAACCGCGAGCTCCTGGCGGCGGTGAACGCGAGCGGGCGGGCGTTCATGACG CACTTCGTGGTGGAGGGCAAGTTCGTGATCCGGCTCGCCGTCGGCGGCGCCATGACGGAG ATGAGGCATGTCGGCGACGCGTGGGAGCTGGTGCAGCGCACGGCGGAGCAGCTGCTGCAG CGCCGGTAG