Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0400200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13497363:13499401:-1 gene:Os10g0400200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN SUBFAMILY A2 FROM WILD RICE SPECIES description:Glutelin type II precursor. (Os10t0400200-01)
Sequence	ATGGCATCCATAAATCGCCCCATAGTTTTCTTCACAGTTTGCTTGTTCCTCTTGTGCGAT GGCTCCCTAGCCCAGCAGCTATTAGGCCAGAGCACTAGTCAATGGCAGAGTTCTCGTCGT GGAAGTCCGAGAGGATGTAGATTTGATAGGTTGCAAGCATTTGAGCCAATTCGGAGTGTG AGGTCTCAAGCTGGCACAACTGAGTTCTTCGATGTCTCTAATGAGTTGTTTCAATGTACC GGAGTATCTGTTGTCCGCCGAGTTATTGAACCTAGAGGCCTACTACTACCCCATTACACT AATGGTGCATCTCTAGTATATATCATCCAAGGGAGAGGTATAACAGGGCCGACTTTCCCA GGCTGTCCTGAGACCTACCAGCAGCAGTTCCAACAATCAGGGCAAGCCCAATTGACCGAA AGTCAAAGCCAAAGCCATAAGTTCAAGGATGAACATCAAAAGATTCACCGTTTCAGACAA GGAGATGTTATCGCGTTGCCTGCTGGTGTAGCTCATTGGTGCTACAATGATGGTGAAGTG CCGGTTGTTGCCATATATGTCACTGATATCAACAACGGTGCTAATCAACTTGACCCTCGA CAGAGGGATTTCTTGTTAGCTGGAAATAAGAGAAACCCTCAAGCATACAGGCGTGAAGTT GAGGAGTGGTCACAAAACATATTTAGTGGCTTTAGCACTGAACTGCTTAGCGAGGCTTTT GGCATAAGCAACCAAGTTGCAAGGCAGCTCCAGTGTCAAAATGACCAAAGAGGAGAAATT GTCCGCGTTGAACGCGGGCTCAGTTTGCTGCAACCATATGCATCATTGCAAGAGCAGGAA CAAGGACAAATGCAATCAAGAGAGCATTATCAAGAAGGAGGATATCAGCAAAGTCAATAT GGGAGTGGCTGCCCTAACGGTTTGGATGAGACCTTTTGCACCATGAGGGTAAGGCAAAAC ATCGATAATCCTAACCGTGCTGATACATACAACCCAAGAGCTGGAAGGGTTACAAATCTC AACAGCCAGAATTTCCCCATTCTTAATCTTGTACAGATGAGCGCCGTTAAAGTAAATCTA TACCAGAATGCACTCCTTTCACCGTTCTGGAACATCAACGCTCACAGCATCGTGTATATT ACTCAAGGCCGAGCCCAGGTTCAAGTTGTCAACAACAATGGAAAGACGGTGTTCAACGGA GAGCTTCGTCGTGGACAGCTACTTATTGTACCACAACACTATGTAGTTGTAAAGAAGGCA CAAAGAGAAGGATGTGCTTACATTGCATTCAAGACAAACCCTAACTCTATGGTAAGCCAC ATTGCAGGAAAGAGTTCCATCTTCCGTGCTCTCCCAACTGATGTTCTAGCAAATGCATAT CGCATCTCAAGAGAAGAGGCTCAGAGGCTCAAGCATAACAGAGGAGATGAGTTCGGTGCA TTCACTCCCCTCCAATACAAGAGCTACCAAGACGTTTATAATGTGGCGGAATCCTCTTAA

Peptide Sequence

PEP ID	Os10t0400200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13497363:13499401:-1 gene:Os10g0400200 transcript:Os10t0400200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN SUBFAMILY A2 FROM WILD RICE SPECIES description:Glutelin type II precursor. (Os10t0400200-01)
Sequence	MASINRPIVFFTVCLFLLCDGSLAQQLLGQSTSQWQSSRRGSPRGCRFDRLQAFEPIRSV RSQAGTTEFFDVSNELFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFP GCPETYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEV PVVAIYVTDINNGANQLDPRQRDFLLAGNKRNPQAYRREVEEWSQNIFSGFSTELLSEAF GISNQVARQLQCQNDQRGEIVRVERGLSLLQPYASLQEQEQGQMQSREHYQEGGYQQSQY GSGCPNGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNL YQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKA QREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGA FTPLQYKSYQDVYNVAESS

Transcript Sequence

Transcript ID	Os10t0400200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13497363:13499401:-1 gene:Os10g0400200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTELIN SUBFAMILY A2 FROM WILD RICE SPECIES description:Glutelin type II precursor. (Os10t0400200-01)
Sequence	AAAAGCATTCAGTTCATTAGTCCTACAACAACATGGCATCCATAAATCGCCCCATAGTTT TCTTCACAGTTTGCTTGTTCCTCTTGTGCGATGGCTCCCTAGCCCAGCAGCTATTAGGCC AGAGCACTAGTCAATGGCAGAGTTCTCGTCGTGGAAGTCCGAGAGGATGTAGATTTGATA GGTTGCAAGCATTTGAGCCAATTCGGAGTGTGAGGTCTCAAGCTGGCACAACTGAGTTCT TCGATGTCTCTAATGAGTTGTTTCAATGTACCGGAGTATCTGTTGTCCGCCGAGTTATTG AACCTAGAGGCCTACTACTACCCCATTACACTAATGGTGCATCTCTAGTATATATCATCC AAGGGAGAGGTATAACAGGGCCGACTTTCCCAGGCTGTCCTGAGACCTACCAGCAGCAGT TCCAACAATCAGGGCAAGCCCAATTGACCGAAAGTCAAAGCCAAAGCCATAAGTTCAAGG ATGAACATCAAAAGATTCACCGTTTCAGACAAGGAGATGTTATCGCGTTGCCTGCTGGTG TAGCTCATTGGTGCTACAATGATGGTGAAGTGCCGGTTGTTGCCATATATGTCACTGATA TCAACAACGGTGCTAATCAACTTGACCCTCGACAGAGGGATTTCTTGTTAGCTGGAAATA AGAGAAACCCTCAAGCATACAGGCGTGAAGTTGAGGAGTGGTCACAAAACATATTTAGTG GCTTTAGCACTGAACTGCTTAGCGAGGCTTTTGGCATAAGCAACCAAGTTGCAAGGCAGC TCCAGTGTCAAAATGACCAAAGAGGAGAAATTGTCCGCGTTGAACGCGGGCTCAGTTTGC TGCAACCATATGCATCATTGCAAGAGCAGGAACAAGGACAAATGCAATCAAGAGAGCATT ATCAAGAAGGAGGATATCAGCAAAGTCAATATGGGAGTGGCTGCCCTAACGGTTTGGATG AGACCTTTTGCACCATGAGGGTAAGGCAAAACATCGATAATCCTAACCGTGCTGATACAT ACAACCCAAGAGCTGGAAGGGTTACAAATCTCAACAGCCAGAATTTCCCCATTCTTAATC TTGTACAGATGAGCGCCGTTAAAGTAAATCTATACCAGAATGCACTCCTTTCACCGTTCT GGAACATCAACGCTCACAGCATCGTGTATATTACTCAAGGCCGAGCCCAGGTTCAAGTTG TCAACAACAATGGAAAGACGGTGTTCAACGGAGAGCTTCGTCGTGGACAGCTACTTATTG TACCACAACACTATGTAGTTGTAAAGAAGGCACAAAGAGAAGGATGTGCTTACATTGCAT TCAAGACAAACCCTAACTCTATGGTAAGCCACATTGCAGGAAAGAGTTCCATCTTCCGTG CTCTCCCAACTGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCAGAGGC TCAAGCATAACAGAGGAGATGAGTTCGGTGCATTCACTCCCCTCCAATACAAGAGCTACC AAGACGTTTATAATGTGGCGGAATCCTCTTAAGTTGGCAATGCGGATAAAGAATAACTAA ATAAATAAATAAATAAATTGCAAGCAATTGCGTTGCTGCTATGTACTGTAAAAGTTTCTT ATAATATCAGTTCTGAATGCTAAGGACATCCCTCAAGATGGTCTTTCTATTTTTGTGTTC CCGTTCCAATGTACTGTTGGTATCCTCTTGGAGATTCATCAATATGAGAAAACAGAGAAT GGACAACCCTCCCTTATCTTATGG