Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0400100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13492802:13496772:1 gene:Os10g0400100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA synthetase, class Ia domain containing protein. (Os10t0400100-01)
Sequence	ATGGCGGCGGCGAAGGAGGCGGTGGTGCCGGTGGAGGGGCGGAGGAACGTGCTGGTGACG AGCGCGCTGCCGTACGTGAACAACGTGCCGCACCTGGGGAACATCATCGGCTGCGTGCTC TCCGCCGACGCCTTCGCGCGCTACTGCCGCCTCCGGGGGCACAACGTGCTCTACGTCTGC GGCACCGACGAGTACGGCACCGCCACCGAGACCAAGGCCATGGAGGAAGGCTGCTCCCCC AGGGAGATCTGCGACAAGTACCATGCCATCCACAAGGAAGTGTACGAGTGGTTCGACATC AGCTTCGACATCTTCGGTAGAACATCGTCGCCGCAACAGACCGAGGTCTGCCAAGACATC TTCCTCAAGCTACTGGACAACAATTGGCTGTCAGAGAACACAATGCAGCAGCTTTACTGC AATTCATGCCAAAGGTTCTTGGCTGACAGGCTTGTGGAGGGCTACTGCCCCACAGAGGGA TGCAACTATGACTCTGCCAGGGGTGACCAATGCGAGAAGTGTGGAAAATTGCTGAATTCA ACTGAGCTGGTTAATCCCAAGTGCAAGGTTTGCGGGAGCACGCCTTGTGTCCGCGACACG GATCACTTGTTCTTGGAGCTCCCTCTGCTGAGGGAGAAACTTGAGAAGTATATCGACGAG ACTTCTTTGACTGGATCATGGAGCCAAAACGCTATTCATGCAACAAATGCTTGGTTGAAG GAAGGGTTGAAGCCTCGCTGCATTACCAGGGATCTGAAATGGGGTGTGCCTGTCCCACAT GAGAAGTACAAAGACAAGGTGTTCTATGTCTGGTTTGATGCACCAATCGGGTACATCTCC ATTACGGCGTGCTACACGCCTGAGTGGGAGAAATGGTGGAAGAATCCAGAAAATGTTGAA TTGTATCAGTTCATGGGTAAAGACAATGTCCCATTCCATACGGTCATGTTCCCCTCCACA CTACTTGGAACTGGAGAAAATTGGACTCTGATGAAGACGATTAGTGTGACAGAGTATCTC AATTATGAATCAGGAAAGTTCTCCAAAACAAAGGGCATTGGAGTGTTTGGGAATGATGCA AAATCCACAAATATTCCTCCTGAAGTGTGGCGATACTACTTGCTTACCAATCGTCCCGAG GCATCAGATACATTGTTCACTTGGACAGATTTGCAAGCCAAGTGTAACAACGAGCTGCTG AACAATTTAGGGAACTTCATCAATCGAGTACTAAGCTTTATCGCGAAACCAGAGGGAACT GGATATGGTTCTGTTGTACCTGATTCTCCTGATGTGGATTCCCATGCTCTGACTCAGTCA TTGGCTGAGACTGTTGGTAAATTGATTGATCAGTACATCGATGCAATGGACAAGGTCAAA ATAAAACAAGGGCTGAAGATTGCAATGGCCATTTCTAGCGAAGGAAATGCATACCTACAA GAGAGTCAGTTTTGGAAGCTTTACAAACAAGATCCAGCCAGTTGCGCAACTGTGATGAAA ACCTCAGTTGGAATTGTGTACCTCCTGGCATGTTTGCTGGAGCCTTTCATGCCAACATTC TCAAAAGATGTTCTGCAGCAGCTAAATCTAAGTCCAGAAGAGCACCTATCATTTTGTGAT GAAAAAGGAGAGGTTGAGAAGGCCAAAAGACCTTGGGATCTCATACCATCAGGCCACAGG ATAGGGAAACCTGCACCTTTGTTCAAGGGATTGGAAAACGAAGCGGTGAAGGGCTTGAGA GAAAAATTTGCAGGCAGCCAAGCTGAAAGAAAATTGAGGACTCAAGTCGCCGCACAATTG GAAGCCACAAGCATATAG

Peptide Sequence

PEP ID	Os10t0400100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13492802:13496772:1 gene:Os10g0400100 transcript:Os10t0400100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA synthetase, class Ia domain containing protein. (Os10t0400100-01)
Sequence	MAAAKEAVVPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVC GTDEYGTATETKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDI FLKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNS TELVNPKCKVCGSTPCVRDTDHLFLELPLLREKLEKYIDETSLTGSWSQNAIHATNAWLK EGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTPEWEKWWKNPENVE LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDA KSTNIPPEVWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGT GYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQ ESQFWKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCD EKGEVEKAKRPWDLIPSGHRIGKPAPLFKGLENEAVKGLREKFAGSQAERKLRTQVAAQL EATSI

Transcript Sequence

Transcript ID	Os10t0400100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13492802:13496772:1 gene:Os10g0400100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA synthetase, class Ia domain containing protein. (Os10t0400100-01)
Sequence	ACCTCTCGCACCACCACCGCGTCAGTATACAAACGGCGGCGACCAACCAAATTCCGGCGA GTCGTCGTCGTCGTCGCCGTCGTCGAGAGAGAGTCAAACCCCCCACACGCAAAGAGAGCG AAACCCCACCCCCCTCCTCTTCCTCATCCACCCCACGCACGCCTCGTCGCGGCCGCGCGA GGTGAGCTGGAGCGAACGGCGGCGATGGCGGCGGCGAAGGAGGCGGTGGTGCCGGTGGAG GGGCGGAGGAACGTGCTGGTGACGAGCGCGCTGCCGTACGTGAACAACGTGCCGCACCTG GGGAACATCATCGGCTGCGTGCTCTCCGCCGACGCCTTCGCGCGCTACTGCCGCCTCCGG GGGCACAACGTGCTCTACGTCTGCGGCACCGACGAGTACGGCACCGCCACCGAGACCAAG GCCATGGAGGAAGGCTGCTCCCCCAGGGAGATCTGCGACAAGTACCATGCCATCCACAAG GAAGTGTACGAGTGGTTCGACATCAGCTTCGACATCTTCGGTAGAACATCGTCGCCGCAA CAGACCGAGGTCTGCCAAGACATCTTCCTCAAGCTACTGGACAACAATTGGCTGTCAGAG AACACAATGCAGCAGCTTTACTGCAATTCATGCCAAAGGTTCTTGGCTGACAGGCTTGTG GAGGGCTACTGCCCCACAGAGGGATGCAACTATGACTCTGCCAGGGGTGACCAATGCGAG AAGTGTGGAAAATTGCTGAATTCAACTGAGCTGGTTAATCCCAAGTGCAAGGTTTGCGGG AGCACGCCTTGTGTCCGCGACACGGATCACTTGTTCTTGGAGCTCCCTCTGCTGAGGGAG AAACTTGAGAAGTATATCGACGAGACTTCTTTGACTGGATCATGGAGCCAAAACGCTATT CATGCAACAAATGCTTGGTTGAAGGAAGGGTTGAAGCCTCGCTGCATTACCAGGGATCTG AAATGGGGTGTGCCTGTCCCACATGAGAAGTACAAAGACAAGGTGTTCTATGTCTGGTTT GATGCACCAATCGGGTACATCTCCATTACGGCGTGCTACACGCCTGAGTGGGAGAAATGG TGGAAGAATCCAGAAAATGTTGAATTGTATCAGTTCATGGGTAAAGACAATGTCCCATTC CATACGGTCATGTTCCCCTCCACACTACTTGGAACTGGAGAAAATTGGACTCTGATGAAG ACGATTAGTGTGACAGAGTATCTCAATTATGAATCAGGAAAGTTCTCCAAAACAAAGGGC ATTGGAGTGTTTGGGAATGATGCAAAATCCACAAATATTCCTCCTGAAGTGTGGCGATAC TACTTGCTTACCAATCGTCCCGAGGCATCAGATACATTGTTCACTTGGACAGATTTGCAA GCCAAGTGTAACAACGAGCTGCTGAACAATTTAGGGAACTTCATCAATCGAGTACTAAGC TTTATCGCGAAACCAGAGGGAACTGGATATGGTTCTGTTGTACCTGATTCTCCTGATGTG GATTCCCATGCTCTGACTCAGTCATTGGCTGAGACTGTTGGTAAATTGATTGATCAGTAC ATCGATGCAATGGACAAGGTCAAAATAAAACAAGGGCTGAAGATTGCAATGGCCATTTCT AGCGAAGGAAATGCATACCTACAAGAGAGTCAGTTTTGGAAGCTTTACAAACAAGATCCA GCCAGTTGCGCAACTGTGATGAAAACCTCAGTTGGAATTGTGTACCTCCTGGCATGTTTG CTGGAGCCTTTCATGCCAACATTCTCAAAAGATGTTCTGCAGCAGCTAAATCTAAGTCCA GAAGAGCACCTATCATTTTGTGATGAAAAAGGAGAGGTTGAGAAGGCCAAAAGACCTTGG GATCTCATACCATCAGGCCACAGGATAGGGAAACCTGCACCTTTGTTCAAGGGATTGGAA AACGAAGCGGTGAAGGGCTTGAGAGAAAAATTTGCAGGCAGCCAAGCTGAAAGAAAATTG AGGACTCAAGTCGCCGCACAATTGGAAGCCACAAGCATATAGAAAATCTAACACTATTTC CCTTCAACTACTAGATGTTAAAACCGGGCTTAACAAAAGGAGCGTTTGTTTTCTTTATTT TGCCTTGAATAATAATTGTACAGTGTAGTGACTTGAGATTAATGATAATACATATTACTT GTAATTCCAAAACTCAAATGCTCAATTGATTTTAGTTTATTGTTGATTAATTATTGAGGC TTGCACATATGCCACTGTTCTG