Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0399200-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:13449222:13450950:-1 gene:Os10g0399200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cys/Met metabolism PLP-dependent enzyme family protein. (Os10t0399200-00)
Sequence	ATGGCGAAGTCATCGTCTCTCGTGACGAAGGTTTTGGTGCAGCGGCGGCGGCGCGTTCAC CGTTCTCGCCGTTCTCCCACCAAGCCGGAGCGCGCTGCCGCCGCCGACACGTTCGGTTCC CTCGCGGGTTGTCCCTCGTCGCCGGAGTATCCGGTGGTGCCGGACTTGGACGACTGCGTC GTCGACACCGCCGTGGATGACGCTCCCGTGGTGGCGGCGGAGGCGGCAGGCCGACGCGCG TCGGACGAGACGCTGGCGGTGCACGCCGGGGAGAAGCTCGGGAGCGGCGCCGCTGAGACG GACTCGATCGCGACGCCGATCGTGAGCGGCACGACGCACTGGTTCAGGGACTCGGCGGAC CTCATCGCCTTCCGGGAAGGCTGGCGGCGGAGCTTCGAGTACGGGCGGTACGGAAACCCG ACGGTGAAGGTGCTGGAGGAGAAGATCAGCGCGCTGGAGAGGGCGGAGGCGACGCTGGTG ACCTCCTCCGGCATGAACGCCATCGTCGCCACGCTGCTCGCCCTCGTCCCCCCCGGCGGC CACGTCGTCGTCACCGCCGACTGCTACAGCGAGGCCCGCGCCTTCATCCACGACAAGCTA TCCAAGATGGGCATCACGTCGACGTTCGTGGATCTTGACGACGACATGGAGGCGCTGGAA TCCGTTCTTGATGAGGACGAGGTGACGATGTTCTACGCCGACTCGATGACGAACCCACAC CTGAAGGTCGTCGACGTGGCACGCGTGGCGGAGCTGTGCCACCGGAGGGGCGCGCTGGTG TGCATCGACAGCACGCTGGCGTCGCCCATCAACCAGAAGCCGCTCGCCCTCGGAGCCGAC GTGGTCCTCCACTCCGCCACCAAGTACATCGCCGGCCACCATGACGTCATCGCCGGCTGT GTCAGCGGCTCAGAGGCCCTCATCTCGAGGATACGCGCGTGGCACCACGACCTCGGCGGC GCCATCAGTCCGAACGCGGCGTACATGATCATTCGGGGATTGAAGACGTTGGCGCTGCGG GTGGAGGCGCAGAACAGGACGGCGCTGCGGATGGCGCGGCTGCTGGAGAAGCACCCCAAG ATCGAGCGCGTCTACTACCCTGGGCTGGAGAGCAGCCCGTGGCACGGCGTCGCGACGAGG CAGATGGCCGGCGCCGGCGGCGTGGTCAGCTTCGAGGTGGCGTCGGACATGCGCGGCGTG ATGAGGTTCGTGGACGCGCTGGAGTTGCCGCTCATCGCGACGTCGCTCGGCGGCTGCGAG AGCCTTGTCCAGCAGCCGGCCGTCATGTCCTACTGGGGTAAGAGTGAGGAGGAGAAGGCG AAGAATGGGATCAAGGACAACTTTGTGAGGTTCAGTTTTGGGATCGAGAAGTTTGAGGAT CTCAGGGATGATATACTCCAAGCCCTAGAGAAGATTTAA

Peptide Sequence

PEP ID	Os10t0399200-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:13449222:13450950:-1 gene:Os10g0399200 transcript:Os10t0399200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cys/Met metabolism PLP-dependent enzyme family protein. (Os10t0399200-00)
Sequence	MAKSSSLVTKVLVQRRRRVHRSRRSPTKPERAAAADTFGSLAGCPSSPEYPVVPDLDDCV VDTAVDDAPVVAAEAAGRRASDETLAVHAGEKLGSGAAETDSIATPIVSGTTHWFRDSAD LIAFREGWRRSFEYGRYGNPTVKVLEEKISALERAEATLVTSSGMNAIVATLLALVPPGG HVVVTADCYSEARAFIHDKLSKMGITSTFVDLDDDMEALESVLDEDEVTMFYADSMTNPH LKVVDVARVAELCHRRGALVCIDSTLASPINQKPLALGADVVLHSATKYIAGHHDVIAGC VSGSEALISRIRAWHHDLGGAISPNAAYMIIRGLKTLALRVEAQNRTALRMARLLEKHPK IERVYYPGLESSPWHGVATRQMAGAGGVVSFEVASDMRGVMRFVDALELPLIATSLGGCE SLVQQPAVMSYWGKSEEEKAKNGIKDNFVRFSFGIEKFEDLRDDILQALEKI

Transcript Sequence

Transcript ID	Os10t0399200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13449222:13450950:-1 gene:Os10g0399200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cys/Met metabolism PLP-dependent enzyme family protein. (Os10t0399200-00)
Sequence	ATGGCGAAGTCATCGTCTCTCGTGACGAAGGTTTTGGTGCAGCGGCGGCGGCGCGTTCAC CGTTCTCGCCGTTCTCCCACCAAGCCGGAGCGCGCTGCCGCCGCCGACACGTTCGGTTCC CTCGCGGGTTGTCCCTCGTCGCCGGAGTATCCGGTGGTGCCGGACTTGGACGACTGCGTC GTCGACACCGCCGTGGATGACGCTCCCGTGGTGGCGGCGGAGGCGGCAGGCCGACGCGCG TCGGACGAGACGCTGGCGGTGCACGCCGGGGAGAAGCTCGGGAGCGGCGCCGCTGAGACG GACTCGATCGCGACGCCGATCGTGAGCGGCACGACGCACTGGTTCAGGGACTCGGCGGAC CTCATCGCCTTCCGGGAAGGCTGGCGGCGGAGCTTCGAGTACGGGCGGTACGGAAACCCG ACGGTGAAGGTGCTGGAGGAGAAGATCAGCGCGCTGGAGAGGGCGGAGGCGACGCTGGTG ACCTCCTCCGGCATGAACGCCATCGTCGCCACGCTGCTCGCCCTCGTCCCCCCCGGCGGC CACGTCGTCGTCACCGCCGACTGCTACAGCGAGGCCCGCGCCTTCATCCACGACAAGCTA TCCAAGATGGGCATCACGTCGACGTTCGTGGATCTTGACGACGACATGGAGGCGCTGGAA TCCGTTCTTGATGAGGACGAGGTGACGATGTTCTACGCCGACTCGATGACGAACCCACAC CTGAAGGTCGTCGACGTGGCACGCGTGGCGGAGCTGTGCCACCGGAGGGGCGCGCTGGTG TGCATCGACAGCACGCTGGCGTCGCCCATCAACCAGAAGCCGCTCGCCCTCGGAGCCGAC GTGGTCCTCCACTCCGCCACCAAGTACATCGCCGGCCACCATGACGTCATCGCCGGCTGT GTCAGCGGCTCAGAGGCCCTCATCTCGAGGATACGCGCGTGGCACCACGACCTCGGCGGC GCCATCAGTCCGAACGCGGCGTACATGATCATTCGGGGATTGAAGACGTTGGCGCTGCGG GTGGAGGCGCAGAACAGGACGGCGCTGCGGATGGCGCGGCTGCTGGAGAAGCACCCCAAG ATCGAGCGCGTCTACTACCCTGGGCTGGAGAGCAGCCCGTGGCACGGCGTCGCGACGAGG CAGATGGCCGGCGCCGGCGGCGTGGTCAGCTTCGAGGTGGCGTCGGACATGCGCGGCGTG ATGAGGTTCGTGGACGCGCTGGAGTTGCCGCTCATCGCGACGTCGCTCGGCGGCTGCGAG AGCCTTGTCCAGCAGCCGGCCGTCATGTCCTACTGGGGTAAGAGTGAGGAGGAGAAGGCG AAGAATGGGATCAAGGACAACTTTGTGAGGTTCAGTTTTGGGATCGAGAAGTTTGAGGAT CTCAGGGATGATATACTCCAAGCCCTAGAGAAGATTTAA