Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0395500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13265745:13269460:1 gene:Os10g0395500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 3 domain containing protein. (Os10t0395500-01)
Sequence	GTTGCGCCGCCGCCTCTCCTCCGCTCCACCCCCGCTCTCTCTCTCGAGTCGCCGCCGGAG ACGACGACGGCGGCGGCGGCGGCGAAGGCCCGGAGAGCTCGCCGTCTGATTGCGCCGATG GAGATGGGGATGAATTCTGTGCAGCCGAATGCTCAGTTTCCTGTGCCGCACAAGTCCCTC TCTTTGGATATCAATGGCAATAAGACAGATATTGTTATCAGCAAGTATGAGGATAACTTT ATGGTGATGGTGACACAAATAGGATGCATGGGAACCATACTAGCTGCCAGGAAAGATGAA AGTGTTTTTTCTGATCCAACCTACAATGTATCTGTTCTTTTTGGAAAGAGAGATGAGCCA TTACTACTAGCTTGTGCACGCCAACTTATTGAACACATAAGTGGTAGTGGCTCAGCACGG TCATTGATGATATCTCTTGGTCTGAAGGATCATTCCCAGGCAACAATGAAATATATTGTT TCCACCATAATTGAGAACCGCCTATGGTAA

Peptide Sequence

PEP ID	Os10t0395500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13265745:13269460:1 gene:Os10g0395500 transcript:Os10t0395500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 3 domain containing protein. (Os10t0395500-01)
Sequence	VAPPPLLRSTPALSLESPPETTTAAAAAKARRARRLIAPMEMGMNSVQPNAQFPVPHKSL SLDINGNKTDIVISKYEDNFMVMVTQIGCMGTILAARKDESVFSDPTYNVSVLFGKRDEP LLLACARQLIEHISGSGSARSLMISLGLKDHSQATMKYIVSTIIENRLW

Transcript Sequence

Transcript ID	Os10t0395500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13265745:13269460:1 gene:Os10g0395500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome assembly chaperone 3 domain containing protein. (Os10t0395500-01)
Sequence	ACGTGTCCTCCGCTCATTGGTTGAGTTGCGCCGCCGCCTCTCCTCCGCTCCACCCCCGCT CTCTCTCTCGAGTCGCCGCCGGAGACGACGACGGCGGCGGCGGCGGCGAAGGCCCGGAGA GCTCGCCGTCTGATTGCGCCGATGGAGATGGGGATGAATTCTGTGCAGCCGAATGCTCAG TTTCCTGTGCCGCACAAGTCCCTCTCTTTGGATATCAATGGCAATAAGACAGATATTGTT ATCAGCAAGTATGAGGATAACTTTATGGTGATGGTGACACAAATAGGATGCATGGGAACC ATACTAGCTGCCAGGAAAGATGAAAGTGTTTTTTCTGATCCAACCTACAATGTATCTGTT CTTTTTGGAAAGAGAGATGAGCCATTACTACTAGCTTGTGCACGCCAACTTATTGAACAC ATAAGTGGTAGTGGCTCAGCACGGTCATTGATGATATCTCTTGGTCTGAAGGATCATTCC CAGGCAACAATGAAATATATTGTTTCCACCATAATTGAGAACCGCCTATGGTAATAGTTT TGCATACCGAGCTGGGATTGGAATGGCTGGGCACATATATATTCACTTCATCAACATAGA TGTTGACATGATTAGTGCTGAGCAATTAACACTCACCAATCTAGAATTTTGTAACTATGA TTTCTTTGGAGTCGATGTATCACAAAGTAGTTATATAACCAAAGTTATAGCGAGAATTGC ACTACTAGCTTTGATGAGTATTTCATCTACGAGCTTCTGAATGCTAATGGTTGTATTCCT GTTGCTTTGCTAATTGGGTTAATTTGGGGCCCAAAATTGGTGAAAGCAAAGCACTTTTCT GGAGC