Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0394200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:13161347:13163933:1 gene:Os10g0394200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 60, SUBTILISIN 60 description:Similar to subtilase family protein. (Os10t0394200-01)
Sequence	TGCTCGGCCGGCAACTCCGGCCCGTCGGGCGCCACGGTCGCGAACTCCGCGCCGTGGGTC GCCACCGTTGGCGCCGGCACGCTCGACCGCGACTTCCCAGCCTACGTCACGCTCCCCACC GGGGCGCGCCTCGCCGGCGTGTCCCTCTACGCTGGGCCCTCACCGTCTCCCCGCCCCGCC ATGCTCCCCCTCGTCTACGGCGGCGGCGGCGACAACGCCAGCAGGCTCTGCCTGCCCGGA ACGCTCGACCCGGCCGCCGTGCGCGGTAAGATCGTGCTCTGCGACCGCGGCGTTAACGCG CGCGTGGAGAAGGGCGCCGTCGTCAAGGCCGCGGGCGGCGCCGGGATGGTGCTGGCCAAC ACCGCCGCCAGCGGGGAGGAGCTCGTGGCGGACAGCCACCTCCTCCCCGCCGTCGCGGTG GGGAAGCTCGCCGGCGACAAGATACGCGAGTACGCCTCGCGCCGCGCCGCCGGCGGCGCC GGCGCGCCGATGGCAATTCTGAGCTTCGGCGGCACGGTTCTTGGCGTCCGGCCATCTCCC GTCGTGGCGGCGTTCAGCTCGCGCGGCCCGAACACCGTCGTGCCGGAGATCTTGAAGCCG GACATGATTGGCCCCGGGGTGAACATCCTCGCCGGCTGGTCCGGCGTCGCCGGGCCGACG GGGCTCGTCAAAGACGGCCGCCGGACACACTTCAACATCATCTCCGGTACATCGATGTCG TGCCCTCACATCAGTGGAGTTGCGGCACTCCTGAAGGCCGCACACCCCGAATGGAGCCCT GCCGCGATCAAGTCTGCTCTGATGACCACTGCTTACACCGTCGACAACACAAACTCTTCT CTCCGAGATGCTGCTGGAGGCTTGCTTGCAACCCCATTCGCCTTCGGCGCAGGCCATGTC GACCCGCAGAAGGCGCTATCTCCAGGCCTTCTATACGACATCTCGACTAAGGACTATGTT TCCTTCCTCTGCTCCCTGAACTACACCACACCACATATCCAAGTGATCACTAAGATGTCC AACATCACCTGCCCAAGAAAATTCCGGCCCGGCGACCTCAACTATCCCTCGTTTTCGGTT GTGTTCAAGAAGAAATCAAAGCATGTTATGAGGTTCAGAAGGGAGGTAACCAATGTCGGC CCAGCAATGTCTGTTTACAATGTGAAGGTCAGTGGCCCTGCATCAGTCAGTGTGAAGGTG ACACCAGCAAAGCTTGTGTTCAACAAGGTAGGGCAGAAGCAGAGATACTATGTCATATTC GCGTCTACGGTTGACGCAAGCAATGCGAAACCAGATTTCGGTTGGATATCCTGGATGAGC AGCCAGCATGTTGTTCGGAGTCCGATCGCGTATACATGGAAGATCTGA

Peptide Sequence

PEP ID	Os10t0394200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:13161347:13163933:1 gene:Os10g0394200 transcript:Os10t0394200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 60, SUBTILISIN 60 description:Similar to subtilase family protein. (Os10t0394200-01)
Sequence	CSAGNSGPSGATVANSAPWVATVGAGTLDRDFPAYVTLPTGARLAGVSLYAGPSPSPRPA MLPLVYGGGGDNASRLCLPGTLDPAAVRGKIVLCDRGVNARVEKGAVVKAAGGAGMVLAN TAASGEELVADSHLLPAVAVGKLAGDKIREYASRRAAGGAGAPMAILSFGGTVLGVRPSP VVAAFSSRGPNTVVPEILKPDMIGPGVNILAGWSGVAGPTGLVKDGRRTHFNIISGTSMS CPHISGVAALLKAAHPEWSPAAIKSALMTTAYTVDNTNSSLRDAAGGLLATPFAFGAGHV DPQKALSPGLLYDISTKDYVSFLCSLNYTTPHIQVITKMSNITCPRKFRPGDLNYPSFSV VFKKKSKHVMRFRREVTNVGPAMSVYNVKVSGPASVSVKVTPAKLVFNKVGQKQRYYVIF ASTVDASNAKPDFGWISWMSSQHVVRSPIAYTWKI

Transcript Sequence

Transcript ID	Os10t0394200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:13161347:13163933:1 gene:Os10g0394200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Subtilisin 60, SUBTILISIN 60 description:Similar to subtilase family protein. (Os10t0394200-01)
Sequence	GTGCTCGGCCGGCAACTCCGGCCCGTCGGGCGCCACGGTCGCGAACTCCGCGCCGTGGGT CGCCACCGTTGGCGCCGGCACGCTCGACCGCGACTTCCCAGCCTACGTCACGCTCCCCAC CGGGGCGCGCCTCGCCGGCGTGTCCCTCTACGCTGGGCCCTCACCGTCTCCCCGCCCCGC CATGCTCCCCCTCGTCTACGGCGGCGGCGGCGACAACGCCAGCAGGCTCTGCCTGCCCGG AACGCTCGACCCGGCCGCCGTGCGCGGTAAGATCGTGCTCTGCGACCGCGGCGTTAACGC GCGCGTGGAGAAGGGCGCCGTCGTCAAGGCCGCGGGCGGCGCCGGGATGGTGCTGGCCAA CACCGCCGCCAGCGGGGAGGAGCTCGTGGCGGACAGCCACCTCCTCCCCGCCGTCGCGGT GGGGAAGCTCGCCGGCGACAAGATACGCGAGTACGCCTCGCGCCGCGCCGCCGGCGGCGC CGGCGCGCCGATGGCAATTCTGAGCTTCGGCGGCACGGTTCTTGGCGTCCGGCCATCTCC CGTCGTGGCGGCGTTCAGCTCGCGCGGCCCGAACACCGTCGTGCCGGAGATCTTGAAGCC GGACATGATTGGCCCCGGGGTGAACATCCTCGCCGGCTGGTCCGGCGTCGCCGGGCCGAC GGGGCTCGTCAAAGACGGCCGCCGGACACACTTCAACATCATCTCCGGTACATCGATGTC GTGCCCTCACATCAGTGGAGTTGCGGCACTCCTGAAGGCCGCACACCCCGAATGGAGCCC TGCCGCGATCAAGTCTGCTCTGATGACCACTGCTTACACCGTCGACAACACAAACTCTTC TCTCCGAGATGCTGCTGGAGGCTTGCTTGCAACCCCATTCGCCTTCGGCGCAGGCCATGT CGACCCGCAGAAGGCGCTATCTCCAGGCCTTCTATACGACATCTCGACTAAGGACTATGT TTCCTTCCTCTGCTCCCTGAACTACACCACACCACATATCCAAGTGATCACTAAGATGTC CAACATCACCTGCCCAAGAAAATTCCGGCCCGGCGACCTCAACTATCCCTCGTTTTCGGT TGTGTTCAAGAAGAAATCAAAGCATGTTATGAGGTTCAGAAGGGAGGTAACCAATGTCGG CCCAGCAATGTCTGTTTACAATGTGAAGGTCAGTGGCCCTGCATCAGTCAGTGTGAAGGT GACACCAGCAAAGCTTGTGTTCAACAAGGTAGGGCAGAAGCAGAGATACTATGTCATATT CGCGTCTACGGTTGACGCAAGCAATGCGAAACCAGATTTCGGTTGGATATCCTGGATGAG CAGCCAGCATGTTGTTCGGAGTCCGATCGCGTATACATGGAAGATCTGAGGGGTGAGGAC AGTAAGTAAATTATATTGGAGATGTTGAATTATTCCCTGGAGCAGATGAAAGATAGATAG CTTGATGATGTAGTTTGCTGATTGCTTCACAAAGAGAATCGGCGTGAAGCTCTCTCTACT GCAAACCTGGAGTTCTTTCTTCGCAGTGTCGGTTACTCGCCGAACTTCTTTTTCCCCCCT TGTAGTTGTCAGTGCGGTTGCCCGTCAAGAAACTTATGTGCTATTAACATGTGAGATTTC CTTTTCTTTTTCTTTCTCTAGTTTCATGTTCTCAGACATGAAATAACCCTGAAATGAATC GGTTGTTTTATGGCAATGATCAGCTCACATCAGCTATTGTTTTATC