Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0390800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:12992051:12993413:1 gene:Os10g0390800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 59 description:Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3) (EREBP-3) (AtERF3). (Os10t0390800-01)
Sequence	ATGTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGGCCACACC AAAAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTTCGAGGAG TTCGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGACGAGTAC GACGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCCGCCGCCG CCGCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGGCGTGAGG AAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGTGCGCGTC TGGCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGCCGCCCGC CGCCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTCGGCTGCT GCTCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTCTCCGCCC GCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGCGCCGGCG TTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGACGACGAGC CACACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGACCCGGAG GTGTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGGCGCGTAC GAGTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCAAGCGGCG AGCGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTGCTTCTGA

Peptide Sequence

PEP ID	Os10t0390800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:12992051:12993413:1 gene:Os10g0390800 transcript:Os10t0390800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 59 description:Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3) (EREBP-3) (AtERF3). (Os10t0390800-01)
Sequence	MCGGAILADLIPSPRSGGHTKKNKRRRISDDEDFEAAFEEFDAGDDDSDSDSESEEVDEY DVVVDDDDSEDGVVVLPPPPPPPPVIPHERHGARRFRGVRKRPWGKWAAEIRDPVRGVRV WLGTFPTAESAARAYDAAARRLRGAKAKPNFPSAPPPSAAAHRRKKRRAHAATRSPSSPP ATSEVTAASASASSDVPAPAFASFVGEPGHGGAKSMPTTSHTSQPAPPATVASENVDDPE VFDPYDVHGGLASYFAGGAYESLESLFAHGGDSAAVDQAASDHWPAALWSFADDGSFCF

Transcript Sequence

Transcript ID	Os10t0390800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12992051:12993413:1 gene:Os10g0390800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 59 description:Similar to Ethylene-responsive transcription factor 3 (Ethylene-responsive element binding factor 3) (EREBP-3) (AtERF3). (Os10t0390800-01)
Sequence	GTCTCAAACCCAATCAAACTCCAACCAAACTCACCTACCTACCCCCAACCCATCCAGAGC TAGAGCTATGTGCGGCGGCGCGATCCTCGCCGACCTCATACCGTCGCCGCGCTCCGGCGG CCACACCAAAAAGAACAAGCGGCGGCGGATCAGCGACGACGAGGACTTCGAGGCCGCCTT CGAGGAGTTCGACGCCGGCGACGACGACTCCGACTCCGACTCCGAGTCCGAGGAGGTAGA CGAGTACGACGTCGTCGTCGACGACGACGACAGCGAGGACGGCGTGGTGGTTCTTCCGCC GCCGCCGCCGCCGCCGCCGGTGATTCCACATGAGCGCCATGGCGCGAGGCGGTTCCGCGG CGTGAGGAAGCGGCCGTGGGGGAAGTGGGCGGCGGAGATCCGCGACCCCGTGCGCGGCGT GCGCGTCTGGCTCGGTACCTTCCCCACCGCCGAGTCCGCCGCGCGCGCCTACGACGCCGC CGCCCGCCGCCTCCGCGGCGCCAAGGCCAAGCCCAACTTCCCCTCCGCGCCGCCGCCCTC GGCTGCTGCTCACCGCCGCAAGAAGCGCCGCGCCCACGCCGCCACGCGCTCGCCGTCGTC TCCGCCCGCCACCAGCGAGGTCACGGCGGCGTCCGCGTCCGCGTCCAGCGATGTCCCCGC GCCGGCGTTCGCTTCCTTCGTCGGCGAGCCCGGGCACGGCGGCGCCAAGTCGATGCCGAC GACGAGCCACACCTCGCAGCCAGCCCCGCCGGCGACGGTGGCGTCCGAGAACGTCGACGA CCCGGAGGTGTTCGACCCGTACGACGTCCACGGCGGCCTCGCCTCCTACTTCGCCGGCGG CGCGTACGAGTCCCTGGAGAGCCTGTTCGCGCACGGCGGCGACAGCGCCGCCGTCGACCA AGCGGCGAGCGACCACTGGCCGGCGGCGCTATGGAGCTTCGCAGACGACGGCTCGTTCTG CTTCTGATGCTGTCAAATCACATCGCCATTGGCGGCCATTGCAAGCCATGGCATGGCACC TGATGATGCTGATCCAGTGAACTGGTCACTCGTTCTTGATGCGTTTTCAGTTTCTTGTAC AGTGTTTTTCCCCAGCAACAGTGAAGTAGTATTCAGTTATTCACTGTTCAGTCATGAGTT CATCGCAAAATATGATGTAAGTATGTGTCTTGAGATTGTTTTAGCAGTGGCTTTTGTTTG TATAATGTATTTCTCTGTAATTAATTAATAGCTGTTTTCAGTGATAAACTAAATTTTCTG