Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0390600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:12977443:12982476:1 gene:Os10g0390600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALANINE AMINOTRANSFERASE 4 description:Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2). (Os10t0390600-01)
Sequence	ATGCTTCGCGCCGCCGCCCGCGCGCTCACCGTCAGCTCCCTCAACCCAAAGGTGCTCGCG CTGGCGGATCACCACCTCGGCGGACTCGTCGCCCGCCGCGCGCAGAGCATGCAACAAGAG CTAGACGCTAATCCAGCTTCACATCCTTTCAGTGAGATCATCTATTGCAACCACAGCAAC CCACAGTCCCAAGGGCAGCAACCAAACAAGTTCTTCCGGGAGGTTCTTGCATTGTGTAAT CATCCCCATCTCCTAGACCGGAGTGAGGCCAGCTTCATGTTCAGCTCTGATGCGATAACG AGGGCACGGGAGATTGTAGGCTTCATTCCTGGAAAAACAACTGGAGGATACAGTCACTGT CAGGGTATTGAAGGGTTGCGTGATGCAATTGCTGCTGGAATAGCTTCTCGCGATGGTTTA CCGTCGTATTCGGAGGACATTTTCCTGACAGATGGAGCAGCTGCACCGGTTCATATGATG ATGCACTTGTTGATACGTGGCAAGAAGGACGGCATCCTTTGCCCAATTCCATCACACTCT TTGTACACAGATTCTATGGTTCTTCGTGGCGCAACTCTTGTACCGTATTACCTTGATGAA TCCAGAGGTTGGAGTGTGAACATTTCAGATCTGAAGAAACAGTTGGATGGTGCCCGGGCA AAGGGCATTGATGTGAGGGGACTTGTGGTGGTAAATCCGGGAAACCCTACTGGGCAGGTT CTTGTGGAGGAAAACCAGTGTGAAATAGTGGAGCTCTGCAAGAATGAATGCCTTGTTCTC CTAGCAGATGAGGTTTACCAAGAAAACATTTACACGGATCAGAAGAAATTTAACTCCTTC AAGAAGGTAGCACGGTCCATAGGCTATGGGGAAGGGGATATATCTTTAGTATCATTCCAC TCAGTATCTAATGGATACTACGGAGAATGCGGGAGAAGAGGGGGTTACATGGAGGTCACT GGCTTCAGCTCGGAAGTAAGGGGAGAAGTATACAAAGTTGCATCCCTAAGCGCATGCTCC AACATATCTGGCCAGATCCTTATGAGCCTAGTCATGAACCCACCAAAGGTTGGAGATGAG TCATACCCCTCTTATCGTGCAGAAAGAGACAGCATACTATCATCTTTGTCTTGCTGTGCA GAGGCCATGGTGTCCACATTCAACAGCATGGAAGGGATGACTTGCAACAAGGCTGAAGGT GGAATATCTGTGTTCCCTAGTGTTCGGCTGCCGCCACGGGCAATTGAAGCTGCTGAGGCG ATGAACACAGAGCCGGATGTGTTCTATGCTCTCCGTCTTCTCGAAAGCACTGGGATTGTT GTTGTGCCTGGCTCAGTGTTTGGACAAGTACCTGGAACATGGCATTTCAGATGCACAATT CTGCCACAGGAAGAGAAGACACGGCAGATTATCTCCCGCTTTAATGTGTTCCATGAAGCA TTTATGGAAGAATTCCGCAGCTAA

Peptide Sequence

PEP ID	Os10t0390600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:12977443:12982476:1 gene:Os10g0390600 transcript:Os10t0390600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALANINE AMINOTRANSFERASE 4 description:Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2). (Os10t0390600-01)
Sequence	MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSN PQSQGQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHC QGIEGLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHS LYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQV LVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFH SVSNGYYGECGRRGGYMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDE SYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEA MNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEA FMEEFRS

Transcript Sequence

Transcript ID	Os10t0390600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12977443:12982476:1 gene:Os10g0390600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALANINE AMINOTRANSFERASE 4 description:Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2). (Os10t0390600-01)
Sequence	ATCCATGGCCGCCTAGCTTAGAGGCTCACCATCGTCACACTGGCTCACTGCTGCATTCCG CATTCCTCGCTCGCTCACCTCACCTCACCTCACTCACCTACATCGCCGGATCGATCGCAC CGTCGCCGGCGGCCAACGAGATGCTTCGCGCCGCCGCCCGCGCGCTCACCGTCAGCTCCC TCAACCCAAAGGTGCTCGCGCTGGCGGATCACCACCTCGGCGGACTCGTCGCCCGCCGCG CGCAGAGCATGCAACAAGAGCTAGACGCTAATCCAGCTTCACATCCTTTCAGTGAGATCA TCTATTGCAACCACAGCAACCCACAGTCCCAAGGGCAGCAACCAAACAAGTTCTTCCGGG AGGTTCTTGCATTGTGTAATCATCCCCATCTCCTAGACCGGAGTGAGGCCAGCTTCATGT TCAGCTCTGATGCGATAACGAGGGCACGGGAGATTGTAGGCTTCATTCCTGGAAAAACAA CTGGAGGATACAGTCACTGTCAGGGTATTGAAGGGTTGCGTGATGCAATTGCTGCTGGAA TAGCTTCTCGCGATGGTTTACCGTCGTATTCGGAGGACATTTTCCTGACAGATGGAGCAG CTGCACCGGTTCATATGATGATGCACTTGTTGATACGTGGCAAGAAGGACGGCATCCTTT GCCCAATTCCATCACACTCTTTGTACACAGATTCTATGGTTCTTCGTGGCGCAACTCTTG TACCGTATTACCTTGATGAATCCAGAGGTTGGAGTGTGAACATTTCAGATCTGAAGAAAC AGTTGGATGGTGCCCGGGCAAAGGGCATTGATGTGAGGGGACTTGTGGTGGTAAATCCGG GAAACCCTACTGGGCAGGTTCTTGTGGAGGAAAACCAGTGTGAAATAGTGGAGCTCTGCA AGAATGAATGCCTTGTTCTCCTAGCAGATGAGGTTTACCAAGAAAACATTTACACGGATC AGAAGAAATTTAACTCCTTCAAGAAGGTAGCACGGTCCATAGGCTATGGGGAAGGGGATA TATCTTTAGTATCATTCCACTCAGTATCTAATGGATACTACGGAGAATGCGGGAGAAGAG GGGGTTACATGGAGGTCACTGGCTTCAGCTCGGAAGTAAGGGGAGAAGTATACAAAGTTG CATCCCTAAGCGCATGCTCCAACATATCTGGCCAGATCCTTATGAGCCTAGTCATGAACC CACCAAAGGTTGGAGATGAGTCATACCCCTCTTATCGTGCAGAAAGAGACAGCATACTAT CATCTTTGTCTTGCTGTGCAGAGGCCATGGTGTCCACATTCAACAGCATGGAAGGGATGA CTTGCAACAAGGCTGAAGGTGGAATATCTGTGTTCCCTAGTGTTCGGCTGCCGCCACGGG CAATTGAAGCTGCTGAGGCGATGAACACAGAGCCGGATGTGTTCTATGCTCTCCGTCTTC TCGAAAGCACTGGGATTGTTGTTGTGCCTGGCTCAGTGTTTGGACAAGTACCTGGAACAT GGCATTTCAGATGCACAATTCTGCCACAGGAAGAGAAGACACGGCAGATTATCTCCCGCT TTAATGTGTTCCATGAAGCATTTATGGAAGAATTCCGCAGCTAAAAGGCGCAAACATTCT TTTTCCATATGTAGTATAACTCTATGTACTTTCTATGACTGATAAGTGATAAGTGATAAG TGTGAGATTTCTACCTG