Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0389500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:12899339:12902125:-1 gene:Os10g0389500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0389500-01)
Sequence

ATGGGGGATGTGTCGTTGAACCCGCCGATCAACGCCGAGCCGCTGACCAAGGGAGATCAA
TTCCTGGACTTGATGTCAGATGGATGGACAAATGAGAGGCACAGCTTGTACATAAGCTCC
ATGGAGGCATCCTTCATGGAACAACTCTATAGGCATGACCACCATGGGCTTGACAGGAAT
AGGAGTCATGCGGGTGGCGCAATTGGGTTCAGGGTGCACCGGGAGGGTGTGTGCGACAAC
CTAAGGTCTGAGAGGAATGATGCTCACGCTCATGATGGAGGCATGAGCTGCTTCCCTGAG
AATCCATGGATAAGGCGTTTCAGACCACGCGATGCCGGTGTGAACCGCAAGAATGATGCG
GTGGGGTTTTCTGTGGATGACGATGAGTCGGGTACTGACATGGTCCGACAGAGGGTTCGG
GTGCATGGAAGAGAAGCGAAGAGTTGTGCTGGAGGAATTCTTGCTGATAAAAGCACAGTA
TCTGATCAGAATTTTCCTGACGAAGATGTCGAAGTCGATTCAGAGCCATGCAAGAGGAGG
AGGCGGCCTACAAATTCCACTGCTACACCTCATGACCAGACAACATAA

Peptide Sequence

PEP ID

Os10t0389500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:12899339:12902125:-1 gene:Os10g0389500 transcript:Os10t0389500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0389500-01)
Sequence

MGDVSLNPPINAEPLTKGDQFLDLMSDGWTNERHSLYISSMEASFMEQLYRHDHHGLDRN
RSHAGGAIGFRVHREGVCDNLRSERNDAHAHDGGMSCFPENPWIRRFRPRDAGVNRKNDA
VGFSVDDDESGTDMVRQRVRVHGREAKSCAGGILADKSTVSDQNFPDEDVEVDSEPCKRR
RRPTNSTATPHDQTT

Transcript Sequence

Transcript ID

Os10t0389500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:12899339:12902125:-1 gene:Os10g0389500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0389500-01)
Sequence

ACCTGGACACTTCTCCCCCCTCCCCTCTCCGCCGCCCGGATGAACCGCCTCCGCCTCCTC
CTCTCCGATCCGTCGTCGCGCTAGACTATATATCTCGCCGTCGTCTCTGATCTCTCCCTC
CACCGGGGAGGCAAGGCGAGATCGTCGCGGGTTCGTTCTGTTCTTCTGGGTTTTCTCTGC
TTACGGTTTCTTGCTCTGAATCGCGGTTATTTATTTATTTTTTGAAAAAGAAAAGAAGAA
AGTATTTGCTGGTTTCTTGATTTGTTTGTGGGTTGTTCACTTGTTCCCCTCTGATTTGCT
TGTGTAGTAATCCAGGGCCTTGTGATTTCTTCGTTCGGGGGGGTGTCCAATTTGGAGAGA
TTTGGATTCCAGGGTTAATTGTTTTTTTCAATTTTTGTTTGGTTTTGTCCTGCTTCTTGG
GAGATTTTGTCATGGGGGATGTGTCGTTGAACCCGCCGATCAACGCCGAGCCGCTGACCA
AGGGAGATCAATTCCTGGACTTGATGTCAGATGGATGGACAAATGAGAGGCACAGCTTGT
ACATAAGCTCCATGGAGGCATCCTTCATGGAACAACTCTATAGGCATGACCACCATGGGC
TTGACAGGAATAGGAGTCATGCGGGTGGCGCAATTGGGTTCAGGGTGCACCGGGAGGGTG
TGTGCGACAACCTAAGGTCTGAGAGGAATGATGCTCACGCTCATGATGGAGGCATGAGCT
GCTTCCCTGAGAATCCATGGATAAGGCGTTTCAGACCACGCGATGCCGGTGTGAACCGCA
AGAATGATGCGGTGGGGTTTTCTGTGGATGACGATGAGTCGGGTACTGACATGGTCCGAC
AGAGGGTTCGGGTGCATGGAAGAGAAGCGAAGAGTTGTGCTGGAGGAATTCTTGCTGATA
AAAGCACAGTATCTGATCAGAATTTTCCTGACGAAGATGTCGAAGTCGATTCAGAGCCAT
GCAAGAGGAGGAGGCGGCCTACAAATTCCACTGCTACACCTCATGACCAGACAACATAAC
AGGATCAATCACCTTCATTTGTTGTTGTTCCATCCGGAAAATCACCCGCAGCGACAAAAA
GCCAGCGAAGACCAGGAGTTTCGTCGAGACTGAAAGGAAGATTGGAGAACATGGGTTGGG
TTGGAATCTTGCTCAACTTGTTGTGGTGATGGGCACTTGTGCTGCTGCTAGTCCTCAGTT
GACTAACTGAAATGTATCGTTCGTTCTTGTGGTGTGTATGAGAGGGCTGCATTTGTTTCC
TAGTTCATATTTAAATCGATTCTCTGGTAGAACATCAGGCTCAAAGACTGTCCACGATTG
AATTGAATTGAACTGTGATGCCTTGTGTTGTATTTCAGCGGCTGTTGTGATCTGCAAGTG
GATTCAGTAGTATCCATGCTTTGTCATTACACAACAGAAGTAATAAGAGCTTACTGTTTT
GTG