Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0384600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:12480539:12506202:-1 gene:Os10g0384600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0664 description:Cyclin-like F-box domain containing protein. (Os10t0384600-01)
Sequence	ATGATCCAGCGCGACTTGTGCTCTTGGCGACCGCCGCCGCCGCGTCGCCGCCGGCAGCCA TACCCACGCGCAAATGGAAGAAGTGATCCACCGTCCTGCAGCCAACCAGGCGCTGACACG ACAATAACGAACATGCAACTTCCGGAGGATATATGGCAGCACATACATTCCCGGATGCCG ATGCGAGACGCCGCTCGTGCTGCCTGCGTGTCACACAGGTTCCTGCGTTTCTGGAGAGGC TACCCCACTGTCACTATCGATCAAGAAACCCTGGGATTAAGCTCGCAACGATTCTGGATC ACGAGCGAAGACGAGAGAGGCGAGTACATCCTCACCAAAGCGCAGAAGGTTCTTGAGAGC CGTCTTTCCGGCTCCACCATTGTGCAGTCGCTCAAGCTTGATCTCTCCACCTTCCGGAAG GCTATAGTTAGTGCCACTGTTGCCGGTGGCCTCCTCGACTGCTGGCTCCGCGCCTTCGTG AAGCCCGGGATTGTGGATATCACTGTGTTACTCCCAAAGTGCGAGGACGACGACGACTGT TACTACTACTACGGTCATGATTGTCTGCCTGAGTACACATTTCCCTGCTCGCTTCTCTCA GACGATGAGGACAAGATAACGTCGCTTCAGTCTCTTTCACTGTCCTCCTGTGGCTTCCAC CCTACAGAAGGGATGACCACACTGCTTGGCTGCTGGAAGAGCATGTCGACGGTGTGCTTG CACAGAGTCGCCATCACGGACGAGGAGCTGGGTTTCTTCCTCGCCGGCTGCCTTGTGCTG GAGCGGCTGGATCTGTCCTTCTGCAATTCGATAGGCGCCCTCAAGATACCTAGTGCACTC CGGCGGCTAAGGTCCCTACGGGTGCGCTCGTGCAGGATGCTGCGGACCATCGAGAGCGGC GCGCCGATGCTCGCCACGGTCTGGTACGACGGGTGGCCGCTGCTGAGGTTCTGGCTCGGT GGCGCGCTCGAGACGACGCATCTGGAGGTGCATGCCACTCGAATGGGGGACGTTATCCAG TATGCCGGCTCCAAGCTCCCCTCCGCCGCGCTGAATCTCGAAACGCTTGTGCTGTCGACT GTTTACGAGAGGTTGAAGGCACCAGTGATGCATGACAAATTCCAACAACTCAAGCATCTC GTCATCTGCCTTGGCCAATCAACTATGTTTTGCGCAGGCTATGACTTTCTCTCTTTGGCT AGTTTCGTTGATGCTTGTCCTGCCTTGGAGACCTTCATTTTACGAATTGCATATGGTATC AGATGGTACAACGACCAGAACCGTGGGAATCCTGACGATGGAGCTTCATGTAGGGGGCGG GAGGCCAGCAAACTCCGCAATGGTGGCATCGTCGGCAACCTGAGGAAGGTGACCATCACC GGTTTCTGCTCGGCGAATAGCCTGGTCGAGCTGACATGCCATATCCTCGTGATCGCAGCG TTATCGCTCGAACACCTGACGCTTGACACCTCCCCTGGTTACGACAGGAAGTGCTCCTCC TATGATCGGTGCAGGAAGATGAGTACAGAGGCTCTCCGGGAGGCCGAGACAGCCCTCGCC GCTGCAAGGAAGTACGTTGAGCCGAAAGTCCCTGACAGCGTTAACCTGATGGTTCTTGGG CCCTGCGGCCGGTGTCACCTGGGCATGGAATACGGCAGTTAG

Peptide Sequence

PEP ID	Os10t0384600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:12480539:12506202:-1 gene:Os10g0384600 transcript:Os10t0384600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0664 description:Cyclin-like F-box domain containing protein. (Os10t0384600-01)
Sequence	MIQRDLCSWRPPPPRRRRQPYPRANGRSDPPSCSQPGADTTITNMQLPEDIWQHIHSRMP MRDAARAACVSHRFLRFWRGYPTVTIDQETLGLSSQRFWITSEDERGEYILTKAQKVLES RLSGSTIVQSLKLDLSTFRKAIVSATVAGGLLDCWLRAFVKPGIVDITVLLPKCEDDDDC YYYYGHDCLPEYTFPCSLLSDDEDKITSLQSLSLSSCGFHPTEGMTTLLGCWKSMSTVCL HRVAITDEELGFFLAGCLVLERLDLSFCNSIGALKIPSALRRLRSLRVRSCRMLRTIESG APMLATVWYDGWPLLRFWLGGALETTHLEVHATRMGDVIQYAGSKLPSAALNLETLVLST VYERLKAPVMHDKFQQLKHLVICLGQSTMFCAGYDFLSLASFVDACPALETFILRIAYGI RWYNDQNRGNPDDGASCRGREASKLRNGGIVGNLRKVTITGFCSANSLVELTCHILVIAA LSLEHLTLDTSPGYDRKCSSYDRCRKMSTEALREAETALAAARKYVEPKVPDSVNLMVLG PCGRCHLGMEYGS

Transcript Sequence

Transcript ID	Os10t0384600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12480539:12506202:-1 gene:Os10g0384600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0664 description:Cyclin-like F-box domain containing protein. (Os10t0384600-01)
Sequence	GTCCGTCCCCACCAACCGGCAGCTAGCGCCGAGAATGATCCAGCGCGACTTGTGCTCTTG GCGACCGCCGCCGCCGCGTCGCCGCCGGCAGCCATACCCACGCGCAAATGGAAGAAGTGA TCCACCGTCCTGCAGCCAACCAGGCGCTGACACGACAATAACGAACATGCAACTTCCGGA GGATATATGGCAGCACATACATTCCCGGATGCCGATGCGAGACGCCGCTCGTGCTGCCTG CGTGTCACACAGGTTCCTGCGTTTCTGGAGAGGCTACCCCACTGTCACTATCGATCAAGA AACCCTGGGATTAAGCTCGCAACGATTCTGGATCACGAGCGAAGACGAGAGAGGCGAGTA CATCCTCACCAAAGCGCAGAAGGTTCTTGAGAGCCGTCTTTCCGGCTCCACCATTGTGCA GTCGCTCAAGCTTGATCTCTCCACCTTCCGGAAGGCTATAGTTAGTGCCACTGTTGCCGG TGGCCTCCTCGACTGCTGGCTCCGCGCCTTCGTGAAGCCCGGGATTGTGGATATCACTGT GTTACTCCCAAAGTGCGAGGACGACGACGACTGTTACTACTACTACGGTCATGATTGTCT GCCTGAGTACACATTTCCCTGCTCGCTTCTCTCAGACGATGAGGACAAGATAACGTCGCT TCAGTCTCTTTCACTGTCCTCCTGTGGCTTCCACCCTACAGAAGGGATGACCACACTGCT TGGCTGCTGGAAGAGCATGTCGACGGTGTGCTTGCACAGAGTCGCCATCACGGACGAGGA GCTGGGTTTCTTCCTCGCCGGCTGCCTTGTGCTGGAGCGGCTGGATCTGTCCTTCTGCAA TTCGATAGGCGCCCTCAAGATACCTAGTGCACTCCGGCGGCTAAGGTCCCTACGGGTGCG CTCGTGCAGGATGCTGCGGACCATCGAGAGCGGCGCGCCGATGCTCGCCACGGTCTGGTA CGACGGGTGGCCGCTGCTGAGGTTCTGGCTCGGTGGCGCGCTCGAGACGACGCATCTGGA GGTGCATGCCACTCGAATGGGGGACGTTATCCAGTATGCCGGCTCCAAGCTCCCCTCCGC CGCGCTGAATCTCGAAACGCTTGTGCTGTCGACTGTTTACGAGAGGTTGAAGGCACCAGT GATGCATGACAAATTCCAACAACTCAAGCATCTCGTCATCTGCCTTGGCCAATCAACTAT GTTTTGCGCAGGCTATGACTTTCTCTCTTTGGCTAGTTTCGTTGATGCTTGTCCTGCCTT GGAGACCTTCATTTTACGAATTGCATATGGTATCAGATGGTACAACGACCAGAACCGTGG GAATCCTGACGATGGAGCTTCATGTAGGGGGCGGGAGGCCAGCAAACTCCGCAATGGTGG CATCGTCGGCAACCTGAGGAAGGTGACCATCACCGGTTTCTGCTCGGCGAATAGCCTGGT CGAGCTGACATGCCATATCCTCGTGATCGCAGCGTTATCGCTCGAACACCTGACGCTTGA CACCTCCCCTGGTTACGACAGGAAGTGCTCCTCCTATGATCGGTGCAGGAAGATGAGTAC AGAGGCTCTCCGGGAGGCCGAGACAGCCCTCGCCGCTGCAAGGAAGTACGTTGAGCCGAA AGTCCCTGACAGCGTTAACCTGATGGTTCTTGGGCCCTGCGGCCGGTGTCACCTGGGCAT GGAATACGGCAGTTAGCATTTTTCTTTTGTTATAAATGGGTTTATGAATGTTTTACCAAA TAATAAGAACTACAATTTAAATATGCATGTTGCAAAGTTTGTAACAATCGGAATACGGAT GTCGGATGGAGAGGGTACCGCTAAACGATTAATCGGAGTACGGACGAATAATCGGAATTT GACGGAAATTTAACGTTTTG