Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0382300-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:12327472:12336589:1 gene:Os10g0382300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-01);Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-02)
Sequence	ATGGACACGCCGCCTCCACCTCCTCCGCCGCCGCCGCCGACGCCGACGCAGTCGTCGCCG CCGGTGAACTGGGACGCGCTCGACGCCCTCGTGCTCGACTTCGCCAGATCCGACCGCCTC CTCCTCCCGCCGGCCTCCCCGTCGCCGCCCTCCTCCCCGTCCTCGTCCTCCACCACCACC GCCACCTCCTCCTCCTCCTCGGCGCCCTCGCCGTCCTCCTCCTACCGCTCGCGCCTCCTC ATCCGCCGCGCCCGCACCGCGCTCGAGGAGGGGGACGTCGACGCCGCGCTCGCGCTCCTC CGGGCCCACGCCCCCGCCGCGCTCCTCGACCACCGCCTCCTCTTCCACCTCCACAAGCAG AGATTCGTGGAGCTTGTGAGGAGGGGCACGGAGGCGGACAGGGAGGCGGCGCTGGACTGC CTCCGCACGGCACTGGCGCCCTGTGCGCTGGATGCCTACCCGGAAGCTTATGAGGAGTTC AAGCATATACTGCTAGTATTGATATATGACAAAGATGATCAATCATCCCCTGTAGCAAAT GAGTGGTCTATAAAGAAGCGATTTGAGCTTGCTGGATTGCTATCATCCATATTGAGAACT CATTTACAAGCTTATGATCCTATTCTATCAATGACATTACGGTACTTGATAAGCATCCAC AAACTACTTTGCTCGCGCCAAGGAATTTCTTCGCCTATATCTAATCTGACTGAAAGGCTG CTGTTTGATGACCGTGATCCACCTGCAGTTCCTCAGGAATGCTCGCTAGAAGCGCCACCA TTTGATGAGGTAGATGTGCAAGCCCTAGCACATGCTGTGGAGTTGACAAGACAAGGGGCT GTTGACAGTTTGAAGTTTGCGAAAGGAGATTTATTTCAAGCGTTTCAGAATGAATTGTGC CGAATGAAGCTGGATCTGCCACTTCTGGATAAACTTATACACGAGTACTGTATATACAGG GGAATAGTTGAAGGTGGTTCCCATGTCCTTCCTGGATTGCAAAGCAATAACCAAAGTAAT GATGTCAATTTCGTAGATAAACAGGAAGACAGTACTGAAACACGGATTGATTTTGAAATG ACTAACAATCAGAATGGAAATTGTAGCACCAGTGATACTTCCCATCATGATTCCTGGTCC AGGAGATTACGTAGGGTTAGAAGTAGTGCATCGGGGCAACGAAGGCGGAAGAGATGGAGA GGACGGGTAGATGATCTGGATTATGGTTGTGAGACCCCATTGGATGCAAATAAACATGCT ATTTTATGTTCTGCTCTTGACATGGATGAAGATGATATGATAGTTAAACCAGACTTGATG GCAGATACTGGTTTGCCTGATTCTAGATGTAATCAAGATCAGAAATATGAAGTTATTTTA GAGATGAGGGATCTCACACGCAAAGGAATGGCTTCAAAAGTTGTTGAAGAGATAAACAAC ATGGATCCTGATTTCTTCTTGAAAAACCCTATTCTTCTATTTCAGCTGAAACAGGTTGAA TTTCTTAAGCTAGTAGCTTCTGGTGATCACGGAGCTGCTCTCAAGGTTGCATCCACTCAT CTGGGGCCTCTTGCTGCCAGTAACCAAGCTTTACTGAAACCTTTGAAGGAAACTTTAGTA ACACTAATTCAACCCTGTGAAGATGTACTCACAAAGTCAGTTTCATTACCCGTTCTTGCA AGTTCTCTCCAGATTGCAATGAGCAGGAGGCTTGGTATTGAAGAACCTCAGTTAATGAAG ATAATTAGAACAACACTTCACACGCACAGCGAATGGTTTAAGCTTCAGATGTGCAAGGAC CGTTTTGAGCACTTTTTGAAGATTGATTCTCTAAAAGAGGTTGATCCATCTGCGGGGAGT CACAATATGTCCAAGGTTCTTACAGATGAATGTGCTAATGGATCTTCTCAAATCACAACA TGCTCTAGTGGCAAGGTGCTAGATGAAGGTAGTAGCCCTCAGGAGTCATCAGAAGTTACC TGTGATGAAAACGCCATACTCAAGGTCATGGAATTTCTTGCTTTGCCAAGGGCTGACGCG ATCCAACTGCTTATGCAATATGGTGGGAATGCCGAGGAAGTCATCCAACAGATCTTTTCG TAG

Peptide Sequence

PEP ID	Os10t0382300-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:12327472:12336589:1 gene:Os10g0382300 transcript:Os10t0382300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-01);Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-02)
Sequence	MDTPPPPPPPPPPTPTQSSPPVNWDALDALVLDFARSDRLLLPPASPSPPSSPSSSSTTT ATSSSSSAPSPSSSYRSRLLIRRARTALEEGDVDAALALLRAHAPAALLDHRLLFHLHKQ RFVELVRRGTEADREAALDCLRTALAPCALDAYPEAYEEFKHILLVLIYDKDDQSSPVAN EWSIKKRFELAGLLSSILRTHLQAYDPILSMTLRYLISIHKLLCSRQGISSPISNLTERL LFDDRDPPAVPQECSLEAPPFDEVDVQALAHAVELTRQGAVDSLKFAKGDLFQAFQNELC RMKLDLPLLDKLIHEYCIYRGIVEGGSHVLPGLQSNNQSNDVNFVDKQEDSTETRIDFEM TNNQNGNCSTSDTSHHDSWSRRLRRVRSSASGQRRRKRWRGRVDDLDYGCETPLDANKHA ILCSALDMDEDDMIVKPDLMADTGLPDSRCNQDQKYEVILEMRDLTRKGMASKVVEEINN MDPDFFLKNPILLFQLKQVEFLKLVASGDHGAALKVASTHLGPLAASNQALLKPLKETLV TLIQPCEDVLTKSVSLPVLASSLQIAMSRRLGIEEPQLMKIIRTTLHTHSEWFKLQMCKD RFEHFLKIDSLKEVDPSAGSHNMSKVLTDECANGSSQITTCSSGKVLDEGSSPQESSEVT CDENAILKVMEFLALPRADAIQLLMQYGGNAEEVIQQIFS

Transcript Sequence

Transcript ID	Os10t0382300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12327472:12336589:1 gene:Os10g0382300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-01);Similar to Signal peptide containing large protein with proline stretches. (Os10t0382300-02)
Sequence	ACGCCACCGCGATGGACACGCCGCCTCCACCTCCTCCGCCGCCGCCGCCGACGCCGACGC AGTCGTCGCCGCCGGTGAACTGGGACGCGCTCGACGCCCTCGTGCTCGACTTCGCCAGAT CCGACCGCCTCCTCCTCCCGCCGGCCTCCCCGTCGCCGCCCTCCTCCCCGTCCTCGTCCT CCACCACCACCGCCACCTCCTCCTCCTCCTCGGCGCCCTCGCCGTCCTCCTCCTACCGCT CGCGCCTCCTCATCCGCCGCGCCCGCACCGCGCTCGAGGAGGGGGACGTCGACGCCGCGC TCGCGCTCCTCCGGGCCCACGCCCCCGCCGCGCTCCTCGACCACCGCCTCCTCTTCCACC TCCACAAGCAGAGATTCGTGGAGCTTGTGAGGAGGGGCACGGAGGCGGACAGGGAGGCGG CGCTGGACTGCCTCCGCACGGCACTGGCGCCCTGTGCGCTGGATGCCTACCCGGAAGCTT ATGAGGAGTTCAAGCATATACTGCTAGTATTGATATATGACAAAGATGATCAATCATCCC CTGTAGCAAATGAGTGGTCTATAAAGAAGCGATTTGAGCTTGCTGGATTGCTATCATCCA TATTGAGAACTCATTTACAAGCTTATGATCCTATTCTATCAATGACATTACGGTACTTGA TAAGCATCCACAAACTACTTTGCTCGCGCCAAGGAATTTCTTCGCCTATATCTAATCTGA CTGAAAGGCTGCTGTTTGATGACCGTGATCCACCTGCAGTTCCTCAGGAATGCTCGCTAG AAGCGCCACCATTTGATGAGGTAGATGTGCAAGCCCTAGCACATGCTGTGGAGTTGACAA GACAAGGGGCTGTTGACAGTTTGAAGTTTGCGAAAGGAGATTTATTTCAAGCGTTTCAGA ATGAATTGTGCCGAATGAAGCTGGATCTGCCACTTCTGGATAAACTTATACACGAGTACT GTATATACAGGGGAATAGTTGAAGGTGGTTCCCATGTCCTTCCTGGATTGCAAAGCAATA ACCAAAGTAATGATGTCAATTTCGTAGATAAACAGGAAGACAGTACTGAAACACGGATTG ATTTTGAAATGACTAACAATCAGAATGGAAATTGTAGCACCAGTGATACTTCCCATCATG ATTCCTGGTCCAGGAGATTACGTAGGGTTAGAAGTAGTGCATCGGGGCAACGAAGGCGGA AGAGATGGAGAGGACGGGTAGATGATCTGGATTATGGTTGTGAGACCCCATTGGATGCAA ATAAACATGCTATTTTATGTTCTGCTCTTGACATGGATGAAGATGATATGATAGTTAAAC CAGACTTGATGGCAGATACTGGTTTGCCTGATTCTAGATGTAATCAAGATCAGAAATATG AAGTTATTTTAGAGATGAGGGATCTCACACGCAAAGGAATGGCTTCAAAAGTTGTTGAAG AGATAAACAACATGGATCCTGATTTCTTCTTGAAAAACCCTATTCTTCTATTTCAGCTGA AACAGGTTGAATTTCTTAAGCTAGTAGCTTCTGGTGATCACGGAGCTGCTCTCAAGGTTG CATCCACTCATCTGGGGCCTCTTGCTGCCAGTAACCAAGCTTTACTGAAACCTTTGAAGG AAACTTTAGTAACACTAATTCAACCCTGTGAAGATGTACTCACAAAGTCAGTTTCATTAC CCGTTCTTGCAAGTTCTCTCCAGATTGCAATGAGCAGGAGGCTTGGTATTGAAGAACCTC AGTTAATGAAGATAATTAGAACAACACTTCACACGCACAGCGAATGGTTTAAGCTTCAGA TGTGCAAGGACCGTTTTGAGCACTTTTTGAAGATTGATTCTCTAAAAGAGGTTGATCCAT CTGCGGGGAGTCACAATATGTCCAAGGTTCTTACAGATGAATGTGCTAATGGATCTTCTC AAATCACAACATGCTCTAGTGGCAAGGTGCTAGATGAAGGTAGTAGCCCTCAGGAGTCAT CAGAAGTTACCTGTGATGAAAACGCCATACTCAAGGTCATGGAATTTCTTGCTTTGCCAA GGGCTGACGCGATCCAACTGCTTATGCAATATGGTGGGAATGCCGAGGAAGTCATCCAAC AGATCTTTTCGTAGTGCTTTGTGTAAATATCAGATACGTTTCATTTGTTTTAGAAATCAA TTATTTGTTCATACTTTTCTTGTATATGAAGTTCTATTGGAACTAGGTTTCTGGTCCCAG TACCTTTGTCCACTACGTTTTCTTCCATGTAATACAGAAACAAAGATGAAAAAATAATCC GGTTCACACTTCT