Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0380800-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:12260670:12262330:-1 gene:Os10g0380800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophan decarboxylase. (Os10t0380800-00)
Sequence	ATGGCACCTGCACCCTCGCACTGCCACGCCACGAATGGCAACAATGGCGCCATCGCCGCC TCTGATACGCCGGTGAAGACACAGCATTGCGCGCGGCTGCTCGACGCCGACGAGTTCCGG CGTCAGGGTCGTCTGGTTGTCGACCTTATCGCCGACTACTACGCCGGCATGGGGGAATAC CCCGTGCACCCCACCGTCAGCCCTGGCTTCCTCCGCCACCGCCTCCCGGCGGAGCCGCCG TCCCGCCGGGAGCCCGACGCGTTCGCCGCGGCGATGCAGGACGTCCGTGACGTCATCCTG CCGGGGCTGACGCACTGGCAGAGCCCCCGCCACTTCGCGCACTTCCCGGCGTCGAGCAGC ACCGCCGGCGCCCTCGGCGAGGCGCTCGCCGCCGGCATCAACGTCGTTCCCTTCACGTGG GCCGCCTCGCCTGCCGCCACCGAGCTGGAGATGGTGGTCGTGGACTGGCTCGGCAAGGCG CTCCACCTGCCGGAGCGGCTGCTGTTCGCCGGAGGCGGGGGCGGCTCCATCCTCGGGACC ACCTGCGAGGCCATCCTCTGCGCCCTCGTCGCCGCTAGGGACCGCAAGCTGGCGGCGATC GGCGAGGGGAGGATCGGCGACCTCGTCGTCTACTGCTCCGACCAGACCCACTTCGCGTTC TGCAAGGCCGCGCGCATTGCCGGCATCCGGCGCGAGCATTGCCGCGAGATACCGACCTAC CGGGACGACGCGTTCGCGCTCTCTCCGGCGGCGCTGCGGGCCGCCATGCGGCGCGACGCC GACGCCGGCCTGGTCCCGCTGTTCGTGTGCGCCACGGTCGGGACCACCCAGACCACCGCC GTGGACCCCGTCGGCGAGCTCTGCGCCGCCGCGGCGCCGCACGGCGCCTGGGTGCACGTC GACGCGGCGTACGCGGGGTCGGCGATGGTGTGCCCGGAGCTCCGCGGCGCGGTCGCCGGC GGCGTCGAGGCCGTGGACTCGTTCAGCATGAACGCCCACAAGTGGCTGCTGGCGAACAAC GACTGCTGCGTCATGTGGGTGAGGACGCCGTCGGCGCTGGTGGCGGCGCTGGGCACGGAC CAGGAGTACATCCTCAAGGACGCCGCGGCGGAGACGGCGGCGGCGGACGGCGGCGAGGGC GTCGTGGACTACAAGGACTGGGGCATCACGCTGACGCGGCGGTTCCGCGCGCTCAAGCTG TGGCTGGTGCTCCGATGCTACGGCGTGGAGGGCCTGCGCGAGCACATCCGGTCCCACGTC GGCATGGCCGCCGCGTTCGAGGGCATGGTCAGGGCCGACGCGAGGTTCGAGGTGGTGACG CCGAGGCGGTTCGCGCTGGTGTGCTTCCGGCTCCGGTCACCCAACAAGAAGACGGCGAAC GAGCTCAACAGGCGGCTCCTCGAGGAGGTGAACGCGGCCAGCTCGGGACCGTACATGAGC TCCGCCAATGTCGGCGGCGTGTACATGCTCAGGTGCGCCGTCGGCAGCACGCTCACCGAG GAGCGCCACGTCCGGGAAGCCTGGAAGGTTGTCCAGGATCGGGCTACGTCCATCCTTTCG AAAATGGAGATTATTATGTAG

Peptide Sequence

PEP ID	Os10t0380800-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:12260670:12262330:-1 gene:Os10g0380800 transcript:Os10t0380800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophan decarboxylase. (Os10t0380800-00)
Sequence	MAPAPSHCHATNGNNGAIAASDTPVKTQHCARLLDADEFRRQGRLVVDLIADYYAGMGEY PVHPTVSPGFLRHRLPAEPPSRREPDAFAAAMQDVRDVILPGLTHWQSPRHFAHFPASSS TAGALGEALAAGINVVPFTWAASPAATELEMVVVDWLGKALHLPERLLFAGGGGGSILGT TCEAILCALVAARDRKLAAIGEGRIGDLVVYCSDQTHFAFCKAARIAGIRREHCREIPTY RDDAFALSPAALRAAMRRDADAGLVPLFVCATVGTTQTTAVDPVGELCAAAAPHGAWVHV DAAYAGSAMVCPELRGAVAGGVEAVDSFSMNAHKWLLANNDCCVMWVRTPSALVAALGTD QEYILKDAAAETAAADGGEGVVDYKDWGITLTRRFRALKLWLVLRCYGVEGLREHIRSHV GMAAAFEGMVRADARFEVVTPRRFALVCFRLRSPNKKTANELNRRLLEEVNAASSGPYMS SANVGGVYMLRCAVGSTLTEERHVREAWKVVQDRATSILSKMEIIM

Transcript Sequence

Transcript ID	Os10t0380800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12260670:12262330:-1 gene:Os10g0380800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophan decarboxylase. (Os10t0380800-00)
Sequence	CCATCTGCAATAGCGGCTGATTATCCGTTAACCTAGCTATCTAAGCGCGGGGTTAATCGA TCGATCAATCGTTCTCACACATGGCACCTGCACCCTCGCACTGCCACGCCACGAATGGCA ACAATGGCGCCATCGCCGCCTCTGATACGCCGGTGAAGACACAGCATTGCGCGCGGCTGC TCGACGCCGACGAGTTCCGGCGTCAGGGTCGTCTGGTTGTCGACCTTATCGCCGACTACT ACGCCGGCATGGGGGAATACCCCGTGCACCCCACCGTCAGCCCTGGCTTCCTCCGCCACC GCCTCCCGGCGGAGCCGCCGTCCCGCCGGGAGCCCGACGCGTTCGCCGCGGCGATGCAGG ACGTCCGTGACGTCATCCTGCCGGGGCTGACGCACTGGCAGAGCCCCCGCCACTTCGCGC ACTTCCCGGCGTCGAGCAGCACCGCCGGCGCCCTCGGCGAGGCGCTCGCCGCCGGCATCA ACGTCGTTCCCTTCACGTGGGCCGCCTCGCCTGCCGCCACCGAGCTGGAGATGGTGGTCG TGGACTGGCTCGGCAAGGCGCTCCACCTGCCGGAGCGGCTGCTGTTCGCCGGAGGCGGGG GCGGCTCCATCCTCGGGACCACCTGCGAGGCCATCCTCTGCGCCCTCGTCGCCGCTAGGG ACCGCAAGCTGGCGGCGATCGGCGAGGGGAGGATCGGCGACCTCGTCGTCTACTGCTCCG ACCAGACCCACTTCGCGTTCTGCAAGGCCGCGCGCATTGCCGGCATCCGGCGCGAGCATT GCCGCGAGATACCGACCTACCGGGACGACGCGTTCGCGCTCTCTCCGGCGGCGCTGCGGG CCGCCATGCGGCGCGACGCCGACGCCGGCCTGGTCCCGCTGTTCGTGTGCGCCACGGTCG GGACCACCCAGACCACCGCCGTGGACCCCGTCGGCGAGCTCTGCGCCGCCGCGGCGCCGC ACGGCGCCTGGGTGCACGTCGACGCGGCGTACGCGGGGTCGGCGATGGTGTGCCCGGAGC TCCGCGGCGCGGTCGCCGGCGGCGTCGAGGCCGTGGACTCGTTCAGCATGAACGCCCACA AGTGGCTGCTGGCGAACAACGACTGCTGCGTCATGTGGGTGAGGACGCCGTCGGCGCTGG TGGCGGCGCTGGGCACGGACCAGGAGTACATCCTCAAGGACGCCGCGGCGGAGACGGCGG CGGCGGACGGCGGCGAGGGCGTCGTGGACTACAAGGACTGGGGCATCACGCTGACGCGGC GGTTCCGCGCGCTCAAGCTGTGGCTGGTGCTCCGATGCTACGGCGTGGAGGGCCTGCGCG AGCACATCCGGTCCCACGTCGGCATGGCCGCCGCGTTCGAGGGCATGGTCAGGGCCGACG CGAGGTTCGAGGTGGTGACGCCGAGGCGGTTCGCGCTGGTGTGCTTCCGGCTCCGGTCAC CCAACAAGAAGACGGCGAACGAGCTCAACAGGCGGCTCCTCGAGGAGGTGAACGCGGCCA GCTCGGGACCGTACATGAGCTCCGCCAATGTCGGCGGCGTGTACATGCTCAGGTGCGCCG TCGGCAGCACGCTCACCGAGGAGCGCCACGTCCGGGAAGCCTGGAAGGTTGTCCAGGATC GGGCTACGTCCATCCTTTCGAAAATGGAGATTATTATGTAG