Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0380100-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:12215500:12216409:1 gene:Os10g0380100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os10t0380100-01)
Sequence

TTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATTGGCACGGCGTGCAAC
CACCAGGTCTCCGATGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGTG
CGCAGCGCCGGCGCCACCCTCCCGACGCCGTTCGTCGACCGCGCGGCGATCGCGGTTCCC
CGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGCACAGC
TGGACCCACTCCTACGGCTCCCTCCCCCTGGAGCGGATCAGGAACCTCGCCGTCCACTTC
CCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCGCCCGGTGCAGCACGTTCCAG
TGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTCTCGCCGGAGGAG
TACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCATG
GACTACTTCGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCTC
TCCTCCAGCTACGCCGCCGTGGTCGGCGTCATCCGCAACGCCGTGGCGCGCGTCGACGAG
CAGTACATCCAGTCGTTCGTCGACTTCGGGGAGGTGGCCGCCGGCGACGAGCTGACGCCG
ACGGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGGG
TTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGAC
GTGCCCGTCGAGGGGTTGCTCATCTTCGTGCCGTCGTGTGCGGCGAAGGGTGGCGTCGAG
ATGTTCATGGCGCTCGACGACGTTCATGTCGAGGCTTTCAGGCAAATCTGCTACTCCATG
GACTGA

Peptide Sequence

PEP ID

Os10t0380100-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:12215500:12216409:1 gene:Os10g0380100 transcript:Os10t0380100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os10t0380100-01)
Sequence

FQVQLTRYACGGLVIGTACNHQVSDGQSMSFFYVAWAAAVRSAGATLPTPFVDRAAIAVP
RGPPAPAFDHRNIEFKGEHSWTHSYGSLPLERIRNLAVHFPDEFVAGLKSHVGARCSTFQ
CLLAHAWKKITAARDLSPEEYTQVRVAVNCRGRASPAVPMDYFGNMVLWAFPRMRVRDLL
SSSYAAVVGVIRNAVARVDEQYIQSFVDFGEVAAGDELTPTAAPPGTVFCPDLEVDSWLG
FRFHDLDFGRGPPCAFLPPDVPVEGLLIFVPSCAAKGGVEMFMALDDVHVEAFRQICYSM
D

Transcript Sequence

Transcript ID

Os10t0380100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:12215500:12216409:1 gene:Os10g0380100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 2 description:Transferase family protein. (Os10t0380100-01)
Sequence

GTTCCAGGTGCAGCTGACGCGGTACGCGTGCGGCGGGCTGGTGATTGGCACGGCGTGCAA
CCACCAGGTCTCCGATGGCCAGTCCATGAGCTTCTTCTACGTCGCGTGGGCCGCCGCCGT
GCGCAGCGCCGGCGCCACCCTCCCGACGCCGTTCGTCGACCGCGCGGCGATCGCGGTTCC
CCGCGGCCCGCCGGCGCCGGCGTTCGACCACCGGAACATCGAGTTCAAGGGCGAGCACAG
CTGGACCCACTCCTACGGCTCCCTCCCCCTGGAGCGGATCAGGAACCTCGCCGTCCACTT
CCCGGACGAGTTCGTCGCCGGCCTCAAGTCCCACGTCGGCGCCCGGTGCAGCACGTTCCA
GTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTCTCGCCGGAGGA
GTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCAGCCCGGCGGTGCCCAT
GGACTACTTCGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGAGAGTCCGGGACCTCCT
CTCCTCCAGCTACGCCGCCGTGGTCGGCGTCATCCGCAACGCCGTGGCGCGCGTCGACGA
GCAGTACATCCAGTCGTTCGTCGACTTCGGGGAGGTGGCCGCCGGCGACGAGCTGACGCC
GACGGCGGCGCCGCCGGGCACGGTGTTCTGCCCGGACCTGGAGGTGGACAGCTGGCTAGG
GTTCAGGTTCCACGACCTCGACTTCGGCCGTGGCCCGCCGTGCGCGTTCCTGCCGCCGGA
CGTGCCCGTCGAGGGGTTGCTCATCTTCGTGCCGTCGTGTGCGGCGAAGGGTGGCGTCGA
GATGTTCATGGCGCTCGACGACGTTCATGTCGAGGCTTTCAGGCAAATCTGCTACTCCAT
GGACTGATCA