Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0379100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:12181085:12183127:-1 gene:Os10g0379100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 1 description:Transferase family protein. (Os10t0379100-01)
Sequence	ATGGCTGCAGTGACGGTGGAGATCACGCGGAGCGAGGTGCTCAGGCCGTCGCCGGCGTCG GCCGGCGGCGGCGAGATGGTCCCGCTCACCGTCTTCGACCGCGCCGCCACGGACGGCTAC ATCCCGACCATGTTCGCCTGGGACGCCGCGGCGGCGGCGGCGCTGTCCAACGACGCCATC AAGGACGGCCTGGCCGCCGTGCTGTCCCGGTTCCCGCACCTCGCCGGCAGGTTCGCCGTC GACGAGCGCGGCCGGAAGTGCTTCCGGCTAAACAACGCCGGCGCGAGGGTCCTCGAGGCC TCCGCCGCCGGCGACCTCGCCGACGCCCTCGCGCACGACGTCGCCGCCCACGTCAACCAG CTCTACCCCCAAGCCGACAAGGATCGTGTGGACGAGCCACTGTTGCAGGTGCAGCTGACG CGGTACACGTGCGGCGGGTTGGTGATCGGCGCGGTGAGCCACCACCAGGTCGCCGACGGC CAGTCCATGAGCGTCTTCTTCACCGAGTGGGCCGCCGCCGTGCGCACCGCCGGCGCCGCC CTCCCGACGCCGTTCCTCGACCGGTCGGCCGTCGCGGCGCCGCGCATCCCGCCGGCGCCG GCGTTCGACCACCGGAACGTCGAGTTCAGGGGCGAGGGGAGCAGGAGCCACTCCTACGGC GCCCTCCCGCTGGAGAGGATGCGGAACCTCGCCGTCCACTTCCCGCCGGAGTTCGTCGCC GGCCTCAAGGCCCGCGTCGGCGGCGCGCGGTGCAGCACGTTCCAGTGCCTCCTGGCGCAC GCGTGGAAGAAGATCACGGCGGCGCGCGACCTCTCGCCGAAGGAGTACACGCAGGTGAGG GTCGCCGTCAACTGCCGCGGCCGCGCCGGCCCGGCGGTGCCCACGGACTACTTCGGCAAC ATGGTGCTCTGGGCGTTCCCGAGGATGCAGGTCCGCGACCTCCTCTCCGCCAGCTACGCC GCCGTGGTCGGCGTCATCCGCGACGCCGTGGCGCGCGTCGACGAGCGGTACATCCAGTCG TTCGTGGACTTCGGCGAGGTGGCCGCCGGCGACGAGCTCGCGCCGACGGCGGCGGAGCCG GGCACGGCGTTCTGCCCGGACCTGGAGGTCGACAGCTGGATAGGGTTCAGGTTCCACGAC CTCGACTTCGGCGGCGGGCCGCCGTGCGCGTTCCTGCCGCCGGACGTGCCCATCGACGGG TTGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGGCGTCGAGATGTTCATGGCGCTC GACGACCAGCACGTCGAGGCTTTGAGGCAGATTTGCTACTCCATGGACTGA

Peptide Sequence

PEP ID	Os10t0379100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:12181085:12183127:-1 gene:Os10g0379100 transcript:Os10t0379100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 1 description:Transferase family protein. (Os10t0379100-01)
Sequence	MAAVTVEITRSEVLRPSPASAGGGEMVPLTVFDRAATDGYIPTMFAWDAAAAAALSNDAI KDGLAAVLSRFPHLAGRFAVDERGRKCFRLNNAGARVLEASAAGDLADALAHDVAAHVNQ LYPQADKDRVDEPLLQVQLTRYTCGGLVIGAVSHHQVADGQSMSVFFTEWAAAVRTAGAA LPTPFLDRSAVAAPRIPPAPAFDHRNVEFRGEGSRSHSYGALPLERMRNLAVHFPPEFVA GLKARVGGARCSTFQCLLAHAWKKITAARDLSPKEYTQVRVAVNCRGRAGPAVPTDYFGN MVLWAFPRMQVRDLLSASYAAVVGVIRDAVARVDERYIQSFVDFGEVAAGDELAPTAAEP GTAFCPDLEVDSWIGFRFHDLDFGGGPPCAFLPPDVPIDGLLIFVPSCAAKGGVEMFMAL DDQHVEALRQICYSMD

Transcript Sequence

Transcript ID	Os10t0379100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12181085:12183127:-1 gene:Os10g0379100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRYPTAMINE HYDROXYCINNAMOYL TRANSFERASE 1 description:Transferase family protein. (Os10t0379100-01)
Sequence	ACAGTGACACATTACACCACACACGTAGCAAAACACATCGTACGTACGTACACCAAGATC TGATCGATCGACGACGGCGGCGATGGCTGCAGTGACGGTGGAGATCACGCGGAGCGAGGT GCTCAGGCCGTCGCCGGCGTCGGCCGGCGGCGGCGAGATGGTCCCGCTCACCGTCTTCGA CCGCGCCGCCACGGACGGCTACATCCCGACCATGTTCGCCTGGGACGCCGCGGCGGCGGC GGCGCTGTCCAACGACGCCATCAAGGACGGCCTGGCCGCCGTGCTGTCCCGGTTCCCGCA CCTCGCCGGCAGGTTCGCCGTCGACGAGCGCGGCCGGAAGTGCTTCCGGCTAAACAACGC CGGCGCGAGGGTCCTCGAGGCCTCCGCCGCCGGCGACCTCGCCGACGCCCTCGCGCACGA CGTCGCCGCCCACGTCAACCAGCTCTACCCCCAAGCCGACAAGGATCGTGTGGACGAGCC ACTGTTGCAGGTGCAGCTGACGCGGTACACGTGCGGCGGGTTGGTGATCGGCGCGGTGAG CCACCACCAGGTCGCCGACGGCCAGTCCATGAGCGTCTTCTTCACCGAGTGGGCCGCCGC CGTGCGCACCGCCGGCGCCGCCCTCCCGACGCCGTTCCTCGACCGGTCGGCCGTCGCGGC GCCGCGCATCCCGCCGGCGCCGGCGTTCGACCACCGGAACGTCGAGTTCAGGGGCGAGGG GAGCAGGAGCCACTCCTACGGCGCCCTCCCGCTGGAGAGGATGCGGAACCTCGCCGTCCA CTTCCCGCCGGAGTTCGTCGCCGGCCTCAAGGCCCGCGTCGGCGGCGCGCGGTGCAGCAC GTTCCAGTGCCTCCTGGCGCACGCGTGGAAGAAGATCACGGCGGCGCGCGACCTCTCGCC GAAGGAGTACACGCAGGTGAGGGTCGCCGTCAACTGCCGCGGCCGCGCCGGCCCGGCGGT GCCCACGGACTACTTCGGCAACATGGTGCTCTGGGCGTTCCCGAGGATGCAGGTCCGCGA CCTCCTCTCCGCCAGCTACGCCGCCGTGGTCGGCGTCATCCGCGACGCCGTGGCGCGCGT CGACGAGCGGTACATCCAGTCGTTCGTGGACTTCGGCGAGGTGGCCGCCGGCGACGAGCT CGCGCCGACGGCGGCGGAGCCGGGCACGGCGTTCTGCCCGGACCTGGAGGTCGACAGCTG GATAGGGTTCAGGTTCCACGACCTCGACTTCGGCGGCGGGCCGCCGTGCGCGTTCCTGCC GCCGGACGTGCCCATCGACGGGTTGCTCATCTTCGTGCCGTCGTGCGCGGCGAAGGGCGG CGTCGAGATGTTCATGGCGCTCGACGACCAGCACGTCGAGGCTTTGAGGCAGATTTGCTA CTCCATGGACTGATTGTTAGCTAATATACGAAAGTAGATACAGACATACAGTACGTGCAT GCAAGGGTTGCATAATTAATTGCATGCACATCAACGAACTTGTTTTTTCTTTATTCCTTG TCAAAGGAGTTAATTAAGCTAATGCAACGAATGTATGATTTCAATAGGAATTACATTGTG GATGTGTGATATACATGTGTAAGCCTTGCTAGTGTAAATATTTCAGTAAGGAATAAAAGT ATATGTGTTCGTGTGTAAAAAATGAAT