Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0377400-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:12048153:12052871:-1 gene:Os10g0377400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11E1 description:Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)
Sequence	ATGGCGGGCGGGGAGAAGGTGGACTACGTGTTCAAGGTGGTGCTGATCGGGGACTCCGCC GTCGGCAAGTCCCAGATCCTCGCCCGCTTCGCCCGCAACGAGTTCTCCATCGACTCCAAG GCCACCATCGGCGTCGAGTTCCAGACCCGCACCCTCCTCATCGACCACAAGTCCGTCAAG GCCCAGATCTGGGACACCGCCGGCCAGGAGAGGTATAGAGCTGTCACGAGTGCATACTAC AGAGGAGCATTGGGAGCTCTCCTAGTCTACGATATCACCAAGCGCCAGAGCTTTGATCAC ATCCCTCGCTGGCTGGAGGAGCTCCGTGGCCATGCGGACAAGAACATAGTCATCATGCTG GTTGGCAACAAGAGCGATCTTGAAGACGAGCGGGCCGTGAGCACCGAGGATGCCAAGGAG TTTGCTGAGAAGGAGAACCTCTTCTTCCTGGAGACCTCCGCTCTGCAGGCCACCAACGTC GAGAACGCCTTCCAGACCGTCCTGTCAGAGATATTCAAAATTCACAGCAAGAAGAACATG GCAGCGGACCCAAAAGCAAACGGCGCTGCCCCATCGCTAGCAGGGAAGAAGGTCGTCGTC CCGGGCCCAGCGCAGGAGATCCCCAAGAGCAAGTGCTGCAGTTCCATGTGA

Peptide Sequence

PEP ID	Os10t0377400-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:12048153:12052871:-1 gene:Os10g0377400 transcript:Os10t0377400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11E1 description:Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)
Sequence	MAGGEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVK AQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIML VGNKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNM AADPKANGAAPSLAGKKVVVPGPAQEIPKSKCCSSM

Transcript Sequence

Transcript ID	Os10t0377400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:12048153:12052871:-1 gene:Os10g0377400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:small GTP-binding protein OsRab11E1 description:Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)
Sequence	CCGTCTCCCCCGCTTCCTCCGCCTCCAAAACCCCCCCATCCCAACCCGACCTCCTCACTC GCCCTCCCCTCGCGCTTCGCTTCGCTCCGATCCGACCGCCGCCGCCGCCGCCGCCACAGC GAGAAGAGAGAGAGGGAGATGGCGGGCGGGGAGAAGGTGGACTACGTGTTCAAGGTGGTG CTGATCGGGGACTCCGCCGTCGGCAAGTCCCAGATCCTCGCCCGCTTCGCCCGCAACGAG TTCTCCATCGACTCCAAGGCCACCATCGGCGTCGAGTTCCAGACCCGCACCCTCCTCATC GACCACAAGTCCGTCAAGGCCCAGATCTGGGACACCGCCGGCCAGGAGAGGTATAGAGCT GTCACGAGTGCATACTACAGAGGAGCATTGGGAGCTCTCCTAGTCTACGATATCACCAAG CGCCAGAGCTTTGATCACATCCCTCGCTGGCTGGAGGAGCTCCGTGGCCATGCGGACAAG AACATAGTCATCATGCTGGTTGGCAACAAGAGCGATCTTGAAGACGAGCGGGCCGTGAGC ACCGAGGATGCCAAGGAGTTTGCTGAGAAGGAGAACCTCTTCTTCCTGGAGACCTCCGCT CTGCAGGCCACCAACGTCGAGAACGCCTTCCAGACCGTCCTGTCAGAGATATTCAAAATT CACAGCAAGAAGAACATGGCAGCGGACCCAAAAGCAAACGGCGCTGCCCCATCGCTAGCA GGGAAGAAGGTCGTCGTCCCGGGCCCAGCGCAGGAGATCCCCAAGAGCAAGTGCTGCAGT TCCATGTGATCTTACTCTACTCAGATTCAGCTGTATTTGTGTGCCTCTTTTTGAGAATTT TCACGCGATCTTTCTGGATGTACATCCCTGCTCAAATAGCTCTAGGCTGCGAGTATTGTT GGACTATTGGTTGTTTCGGTGATCAGGTGGACGGGATAGCTTAGAATTTGTGACATTTTG TCACTTCTCTCAGCTGGAGTAGGGTGCGAGCAGAGGAGCTCTATTTTTCATAGGAGTGGG TTAATTTGTGGGGGTTAATTACCAATAGCCATGTATGCCGATTGTTTTACATTTCTTAAA TCCTTTATGTATTGTTAC