Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0377000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:12021772:12024125:1 gene:Os10g0377000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0377000-01)
Sequence

ATGTCGGCCCTTGTCAGGTCCGTGGCGTCGCTCTACTGCCAGGGGCTCCGGCGAACCGTC
CGCCTCGGCGGCGGCGCCACCGCGGGGACACCGGCGGCGCGAGCACCGGCGCTGGATCAA
CGGAGGCCGTTCTTGTCCAGGGTGGATCGCATAGAGGCCACCACCGGCGGCGGCGGCGGC
GGCGCGGCGGACACGGGAGGATCACCGCGCCGGCATGGCAAAGAAGGAACAGCCCCTCTC
TTCACCTGGGCAAGATTGGTCGTCGTCCTCGCCGCCATGGCGCCGTTCTTGCAGTCCAAG
TGGGCGACGCTTCTCCGAATCCAAAGCGAGGTGGAGATGGTGAAGGACGCGGCGGAGACG
GCGGCGGAGGTGGTGGAGGAGGTGGCCGCGGCGGTGGAGAAGGCGTCGGCGGAGGTGGCG
GAGGCGGAGCAGCTGCCGGAGCACGGGGCGCTGCGGCGGGCGGCGGCGCTGGTGGAGCGC
GCGTCCAGGGAGGTCGCCGAGGAGGCTCATCTCGCCCACGACATCATCCACAAGGTTGAC
GAAATCGAAGAGGACGTGAAGACGATGATCGAGCCGATTATAGATAATCACAAGCATGGC
ACAAGAGGCACCATTAAGAAGCACTAA

Peptide Sequence

PEP ID

Os10t0377000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:12021772:12024125:1 gene:Os10g0377000 transcript:Os10t0377000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0377000-01)
Sequence

MSALVRSVASLYCQGLRRTVRLGGGATAGTPAARAPALDQRRPFLSRVDRIEATTGGGGG
GAADTGGSPRRHGKEGTAPLFTWARLVVVLAAMAPFLQSKWATLLRIQSEVEMVKDAAET
AAEVVEEVAAAVEKASAEVAEAEQLPEHGALRRAAALVERASREVAEEAHLAHDIIHKVD
EIEEDVKTMIEPIIDNHKHGTRGTIKKH

Transcript Sequence

Transcript ID

Os10t0377000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:12021772:12024125:1 gene:Os10g0377000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0377000-01)
Sequence

GATCAAATAGACATTTACTCCGATATATCGCGGTCGATCGTTGTGAAAAATGTCGGCCCT
TGTCAGGTCCGTGGCGTCGCTCTACTGCCAGGGGCTCCGGCGAACCGTCCGCCTCGGCGG
CGGCGCCACCGCGGGGACACCGGCGGCGCGAGCACCGGCGCTGGATCAACGGAGGCCGTT
CTTGTCCAGGGTGGATCGCATAGAGGCCACCACCGGCGGCGGCGGCGGCGGCGCGGCGGA
CACGGGAGGATCACCGCGCCGGCATGGCAAAGAAGGAACAGCCCCTCTCTTCACCTGGGC
AAGATTGGTCGTCGTCCTCGCCGCCATGGCGCCGTTCTTGCAGTCCAAGTGGGCGACGCT
TCTCCGAATCCAAAGCGAGGTGGAGATGGTGAAGGACGCGGCGGAGACGGCGGCGGAGGT
GGTGGAGGAGGTGGCCGCGGCGGTGGAGAAGGCGTCGGCGGAGGTGGCGGAGGCGGAGCA
GCTGCCGGAGCACGGGGCGCTGCGGCGGGCGGCGGCGCTGGTGGAGCGCGCGTCCAGGGA
GGTCGCCGAGGAGGCTCATCTCGCCCACGACATCATCCACAAGGTTGACGAAATCGAAGA
GGACGTGAAGACGATGATCGAGCCGATTATAGATAATCACAAGCATGGCACAAGAGGCAC
CATTAAGAAGCACTAAATTTTCAGAGAACTCAACTTCAGCTCTGTACAAATGTTCAGATT
GTTTGTGCAAAACCTCTTAGGTCTTTAGCCAATATTCGTCGAATCGGTTAATTCAATTGT
TAATATTCCCCTGTTAAGCAGAGCAACAAATGGGAGAAGAATTTATCAAACTTTTTCAGA
TAATGTTCTACGAAATTACTTCACTTATCTTCTATGAAGCATGTAATGATAATCATTTCC
GCTTGAAAAAAAACCCGAATAATATCTCATTTTCAATCAATCTCCCTCTCGGTCTCGAAT
TAATCAAACAAAT