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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0376400-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:11989580:11990593:1 gene:Os10g0376400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphate-induced protein 1 conserved region containing protein. (Os10t0376400-00)
Sequence

ATGCCGCGATCTCATCATCTCCTCGCGGCGGCGGTGGCGGCGGTGGTTGTGGTGGTGATG
GGATGGTCGGCGCGGCCGTGCGAGGCGTCGCTGTACCAGCCGCCGCCGCCGGCGATGGCG
TACCACGACGGCGCGGTGCTGGAGGGCGCCGTGCCGGTGTCGGTGCTCTACTACGGCGCG
TTCCCGCCGCACCACAGGGCCGTCGTCGCCGACTTCCTCATGTCGCTGTCGCCGCGGGGG
CGGGACCACCAGCCGCACACGTTCGGCGCGCCGGGGCCGGCGCCGCCGCCGACGGTGGCG
CGGTGGTGGGGCACCGTGGAGAGGTACGTCCGTAAGGCCGGCCGCGGCGGCGGCGCCGGG
GTGGCGCGCGTGGTGCTCGCCAGCCAGGTGGACGACGAGGGGTGCTCCCTCGGGAGGCGC
CTGTCGCGCGCCCAGGTCGAGCGGCTGGCGGCGCGGCTCGGCGTCGCGCCGGGCGGCGTG
GCCGTCGTGCTGACCGCCGCCGACGTCGCCGTCGAGGGGTTCTGCTCCAGCGCCTGCGGC
GCGCACGGCTCGTCGGCGCCCGGCGGCGGCGCTGTGCACGTGTGGGTGGGCGACGCGTCG
GCGCAGTGCCCCGGCCGGTGCGCGTGGCCGTTCCACGCCGCGGACTACGGCGACGCCGAC
GCCGGCCGCCACCGCCGCGCGCACGGCCACGACGTGGCGCTCCGCGCGCCGAACGGCGAC
GCCGGGGTGGACGGCGTGGTGATCAACCTGGCGGCGCTGATGGCCGGCGCGGTGACGAAC
CCGTACGGGCGCGGCTACTTCCAGGGCGACGCGGCGGCGCCGGTGGAGGTGGCCGGAGCG
TGCCCGGGGGTGTACGGCCGCGGCGCGTACCCGGGATACCCGGGCGCCGTGAGGGTGGAC
GCGGCCACCGGCGCCGGGTACAACGTCGTCGGCCGGAACGGCCGGCGATACCTCGTGCCG
GCGCTCGTCGACCCGGACAACTACTCCTGCCTCATCATGACCTAA

Peptide Sequence

PEP ID

Os10t0376400-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:11989580:11990593:1 gene:Os10g0376400 transcript:Os10t0376400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphate-induced protein 1 conserved region containing protein. (Os10t0376400-00)
Sequence

MPRSHHLLAAAVAAVVVVVMGWSARPCEASLYQPPPPAMAYHDGAVLEGAVPVSVLYYGA
FPPHHRAVVADFLMSLSPRGRDHQPHTFGAPGPAPPPTVARWWGTVERYVRKAGRGGGAG
VARVVLASQVDDEGCSLGRRLSRAQVERLAARLGVAPGGVAVVLTAADVAVEGFCSSACG
AHGSSAPGGGAVHVWVGDASAQCPGRCAWPFHAADYGDADAGRHRRAHGHDVALRAPNGD
AGVDGVVINLAALMAGAVTNPYGRGYFQGDAAAPVEVAGACPGVYGRGAYPGYPGAVRVD
AATGAGYNVVGRNGRRYLVPALVDPDNYSCLIMT

Transcript Sequence

Transcript ID

Os10t0376400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11989580:11990593:1 gene:Os10g0376400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphate-induced protein 1 conserved region containing protein. (Os10t0376400-00)
Sequence

ACGGAGGCGATGCCGCGATCTCATCATCTCCTCGCGGCGGCGGTGGCGGCGGTGGTTGTG
GTGGTGATGGGATGGTCGGCGCGGCCGTGCGAGGCGTCGCTGTACCAGCCGCCGCCGCCG
GCGATGGCGTACCACGACGGCGCGGTGCTGGAGGGCGCCGTGCCGGTGTCGGTGCTCTAC
TACGGCGCGTTCCCGCCGCACCACAGGGCCGTCGTCGCCGACTTCCTCATGTCGCTGTCG
CCGCGGGGGCGGGACCACCAGCCGCACACGTTCGGCGCGCCGGGGCCGGCGCCGCCGCCG
ACGGTGGCGCGGTGGTGGGGCACCGTGGAGAGGTACGTCCGTAAGGCCGGCCGCGGCGGC
GGCGCCGGGGTGGCGCGCGTGGTGCTCGCCAGCCAGGTGGACGACGAGGGGTGCTCCCTC
GGGAGGCGCCTGTCGCGCGCCCAGGTCGAGCGGCTGGCGGCGCGGCTCGGCGTCGCGCCG
GGCGGCGTGGCCGTCGTGCTGACCGCCGCCGACGTCGCCGTCGAGGGGTTCTGCTCCAGC
GCCTGCGGCGCGCACGGCTCGTCGGCGCCCGGCGGCGGCGCTGTGCACGTGTGGGTGGGC
GACGCGTCGGCGCAGTGCCCCGGCCGGTGCGCGTGGCCGTTCCACGCCGCGGACTACGGC
GACGCCGACGCCGGCCGCCACCGCCGCGCGCACGGCCACGACGTGGCGCTCCGCGCGCCG
AACGGCGACGCCGGGGTGGACGGCGTGGTGATCAACCTGGCGGCGCTGATGGCCGGCGCG
GTGACGAACCCGTACGGGCGCGGCTACTTCCAGGGCGACGCGGCGGCGCCGGTGGAGGTG
GCCGGAGCGTGCCCGGGGGTGTACGGCCGCGGCGCGTACCCGGGATACCCGGGCGCCGTG
AGGGTGGACGCGGCCACCGGCGCCGGGTACAACGTCGTCGGCCGGAACGGCCGGCGATAC
CTCGTGCCGGCGCTCGTCGACCCGGACAACTACTCCTGCCTCATCATGACCTAA