Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0371000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:11723427:11726359:1 gene:Os10g0371000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen proteins Ole e I family protein, expressed. (Os10t0371000-01)
Sequence

ATGGCGTCCCCCCGCGCGCTCTCCCTCCTCCTCGTCCTCCTGGGCATGGCCCTCGCGTCG
TTCCCCTCCGCCGCCTCCGCCTCCCGCGACCTCCGCCCCCGCCGCGCGGGCTTCGTCGTC
CGCGGCCGCGTCTGGTGCGACACCTGCCTCGCCGGCTTCGAGACCCCCGCCTCCACCTAC
ATCGCCGGAGCGAAGGTAAAGGTTGAGTGCAGATCGAAATCCACTGGCGCCAAGACATGC
AGCTTCGAGGGCCAGACTGACCACACTGGCACCTACAACATCCCTGTCAACGATGAGCAT
GAGCACGAGCTCTGCGAGTCTGTCCTTGTGAGCAGCCCGGACGCAAAGTGTGGCAAGATT
GTTGCTGGACGGGAGAGGGCTCCTGTCTTCCTCACCAACAACAATGGTGTGACATCTAAT
GTTCGGTTGGCGAACGCTCTGGGCTTCCAGAAGGATGCTCCTCTTGCTGCGTGCGCACAA
ATCCTCAAGATGTACGAGGAAGTGGACGACCGCGTTTGA

Peptide Sequence

PEP ID

Os10t0371000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:11723427:11726359:1 gene:Os10g0371000 transcript:Os10t0371000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen proteins Ole e I family protein, expressed. (Os10t0371000-01)
Sequence

MASPRALSLLLVLLGMALASFPSAASASRDLRPRRAGFVVRGRVWCDTCLAGFETPASTY
IAGAKVKVECRSKSTGAKTCSFEGQTDHTGTYNIPVNDEHEHELCESVLVSSPDAKCGKI
VAGRERAPVFLTNNNGVTSNVRLANALGFQKDAPLAACAQILKMYEEVDDRV

Transcript Sequence

Transcript ID

Os10t0371000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11723427:11726359:1 gene:Os10g0371000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pollen proteins Ole e I family protein, expressed. (Os10t0371000-01)
Sequence

ACGACCATTATTCCTCCTCCTCTCTGGAGTCTAGTCTCCTCTCCTCACTCCTCACTCGCC
CCACTCCGCCGCTTCACTCGCGAGCTCGTCGTTGGCGCCGGCGGCAATGGCGTCCCCCCG
CGCGCTCTCCCTCCTCCTCGTCCTCCTGGGCATGGCCCTCGCGTCGTTCCCCTCCGCCGC
CTCCGCCTCCCGCGACCTCCGCCCCCGCCGCGCGGGCTTCGTCGTCCGCGGCCGCGTCTG
GTGCGACACCTGCCTCGCCGGCTTCGAGACCCCCGCCTCCACCTACATCGCCGGAGCGAA
GGTAAAGGTTGAGTGCAGATCGAAATCCACTGGCGCCAAGACATGCAGCTTCGAGGGCCA
GACTGACCACACTGGCACCTACAACATCCCTGTCAACGATGAGCATGAGCACGAGCTCTG
CGAGTCTGTCCTTGTGAGCAGCCCGGACGCAAAGTGTGGCAAGATTGTTGCTGGACGGGA
GAGGGCTCCTGTCTTCCTCACCAACAACAATGGTGTGACATCTAATGTTCGGTTGGCGAA
CGCTCTGGGCTTCCAGAAGGATGCTCCTCTTGCTGCGTGCGCACAAATCCTCAAGATGTA
CGAGGAAGTGGACGACCGCGTTTGAAGGATGTGAGTTATGTATCAATATTCGTACGTTGT
TGAAATACTCTAAGAAGACTTCTATATACCTTTTACTGAGAGCAAAACTATCAGCATCAG
ATGTTGCGTGCTTGATAAGTTGTGATATAGCTTAGCACTTGAGTATGTTATATGTATGTT
CGTCTGCAGCTGAACTGCAAAACTCATCAGTTACTAAATCGACATGTTGTGCTTTCTATC
AGGC