Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0370100-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:11649673:11657087:-1 gene:Os10g0370100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os10t0370100-01);Similar to NB-ARC domain containing protein, expressed. (Os10t0370100-02)
Sequence	ATAGTAATAATTACACAGGTTGAAGATCTTGCATTAACATGTTGCTGTTATGACACCGAA TATATTTTTGAGATGAAACCCATGGATGATGAGCACTCAACAACGTTGTTTCTTCAGAGA TTTTTTGGTTTTGTAAGTGATTGCCCTCAACAATTCAAAGAAGTTTCAAACAAAATTGTT CAAATATGTGGTGGTTTGCCTTTAGCAACAATCAGCCTAGCTAGCCTTTTAGCAAGTCAG CCTGTCATCTTAATGGATCTATGTTTATACATACGTAATTCTTTAAGCTCTGCTTTTAGG ACAAATTCTTCTATAGAAGGAACGCGGCAAGTATTAAACCTCAGCTACAATAATCTTCCT CATTACTTGAAGACATGCTTGCTATATCTTAATATGTATCCAGAGGGTTATAAAATATGC AAGGATGATGTTGTGGAAAAATGGGTGGCTGAAGGTTTTATTGATCAAATAGAGGGCCGA GACTTGGAGAAAGTTGCAGGGAGCTATTTCGATGAACTTATTGACAGAAGATTCCTCCAA CCTAGCAGACTCAACTACAACAATGAGGTGTCAACTTGTACAATTCATGATGAGGTACGA GATCTTATTGCATACAAGTCTGTAGAGGAGAACTTTGTTCTGGTATTAGATTTTTACCGG AAGGATGTGGAACTTTCTGATAAAGTTCGTCGACTTTCTGTCCACTTTGGTGACATAAAG TATGCAAAAATACCAACAAACATCAGAACATCAGAAGTTCGATCACTTACATTTTTTGGA TTATGTAAGTGTATGCCTTCTCTTACAGAGTTTAAGCTTCTTCGTGTTCTAAACCTTCAA TTATCTGGTCATGTTGGTGATGAACTCTTAGACCTCAGTGGGATTTCTGAACTATTTCAA CTGAGATATTTGAAGATTGCATGCGATATTCGCACAGAACTACCAAGCCAAATGCGAGGG CTAAAATATTTAGAAACGTTGCAGATGGATACAACACTCACTGCTGTTCCTTGGGATATT ATCTTTCTCCCGTGCTTGTTACACCTCCATCTTCGTTTTGATATGAATCTGATTGATTTG ATGGGCCACATGACACCTCCCAGCGAACTAGGATCAAGCAGTAGTAACTCATCACCCAGT GGGGGCATCATTAGCAATCTGAACAACGTACGGGATATTCATCTCACCTTCTGTGCACTG CCTTCCAAACATCTAGAGAGAAACATGGAAATTTTGGGCTCTTTGCTTGGAAGACTTGGT AATCTGAAAAATCTAACTCTAGTTTCTTCTTCCTCTCAAAAGAAAATTGCGGCTTCAGGA GCCTCAGAAGTAACTATTTTGTGGGATAATTTGGCACCTCCACCTCTTCTCCAGAGATTT GAGTGGTTGCTGCACAGCTGCATCTTTTACAGAGTTCCTAAGTGGATTGGAGAACTTGGC AACCTATGCATTTTAAAGATTGCAGTAAGGGAGCTTGTAAAGAACAGTGTTGATATTCTC AGGGGATTGCCTGCCCTCATGGCTCTATCTTTGAATGTGCACAGAGCATCTGTAGAAAAC ATTTTCTTTGATAAGGTAGGATTCTCAGTTCTCAAGTACTTCAAGTATAATTGTAGTGTA CCTTGGCTGAAATTTGAGGCAGGGGCAATGCCTAATCTCAGGAAGCTCAAGTTAGGTTTC AGTGCCCTTGGGGATCTATATGGTACTGCACCTATCAGGATTGGACACTTGTTAGGCCTC AAAGAAATCTCAGTAAAAATTCATGGTGCAAGTGTCGACGCAGAGTCTGCATTGACATCT GCTGTTAGCAATCACCCAAGCAATCCTAGAATCAACGTACAGTTGGTGGATAAGATTTTT TATGGTGATAGAGTGACAAAAGAGAAAGATCATGGGTCTGAGGAAGAACAAAATGCTATC ATGAGCGCCAACTTCGATGAATATCATCAAACTCAAGATAAAGAGTCAAGTGATGCGAAC AAACAAGTTGGAAGTATTGTGCCTCTGCCACGGGAGCAAGAACATGGGATTTTAGAACAT GATGAGTATGCACCAAAAGACCCAGATAAGTACAAACAATCTGATATCAGGTCTGTATCA TCAATGTATCCGTGGCATCTGAAGTTTCTAGGTGCCTTATCAATCCATGGAGGCACAAGA CTTGCAACAGCACCAAGAAAGGCAGAAGATGCATACATCTCATATGCCATGAAGGGGAAT ATGCAAGACTCGGTGCACATGCCTGATTCTAGCTGCTACCTCTCAATGCTTGTCCTACCC ATGGCGTTGGACATGAAGTCACATCTATACGAGTCCTTCGAGGTCACCTTGGCTCGTGCC AACACATGGCTCTATGCCTCGCAGGCCTCTGGTGTCCCCATCAAGTTGATGAGTGTGCAG AGTGATGATCTTCTCACCAAGATATCGAGAGTTGGAGACGCCACATCTGCAACTGTCAAT TCAGGGTTGTTGCCTGATCTGTCAAATGCAACCTTGGAGGATTACCAAGGCTATAACACT GAGGTGGTGAAGGCAGCCCGACTTTGGTACAGCTCCATAGGAGGAGAAATGCCACTGGAG ATCACTCCTAAAGTAGGTGACACAAAACTAGGATTTGCAATCAGCCGTACTGAGGAGGGT TTTATCTACATATCTTCAGTGTTGCAAGATGACAATGACAGCGAGACACCGTCAACACGG TCAGGGATGCACAATCTGTTCAACCGGGCAAGAGAGGCATCGAAATTGCTGGTCATCTCA AGGGTGTCCAATGAGAAGGTCCTGCCCTGGATGATCTCTAGTTCAGGGGCAATCCGCTGC TTTGACACTCTCTCGATCAGCCAAAAGCTTTCCTTGAGCCGATACCCATTGTGCTCCTTC CAGCTGCATCTACTCATGTGGGAGAAGCCTATTCATCCTGCCGAGAGAAGCATTCATCGC CCAAAAATGCCTTTTTTTTTTTGA

Peptide Sequence

PEP ID	Os10t0370100-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:11649673:11657087:-1 gene:Os10g0370100 transcript:Os10t0370100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os10t0370100-01);Similar to NB-ARC domain containing protein, expressed. (Os10t0370100-02)
Sequence	IVIITQVEDLALTCCCYDTEYIFEMKPMDDEHSTTLFLQRFFGFVSDCPQQFKEVSNKIV QICGGLPLATISLASLLASQPVILMDLCLYIRNSLSSAFRTNSSIEGTRQVLNLSYNNLP HYLKTCLLYLNMYPEGYKICKDDVVEKWVAEGFIDQIEGRDLEKVAGSYFDELIDRRFLQ PSRLNYNNEVSTCTIHDEVRDLIAYKSVEENFVLVLDFYRKDVELSDKVRRLSVHFGDIK YAKIPTNIRTSEVRSLTFFGLCKCMPSLTEFKLLRVLNLQLSGHVGDELLDLSGISELFQ LRYLKIACDIRTELPSQMRGLKYLETLQMDTTLTAVPWDIIFLPCLLHLHLRFDMNLIDL MGHMTPPSELGSSSSNSSPSGGIISNLNNVRDIHLTFCALPSKHLERNMEILGSLLGRLG NLKNLTLVSSSSQKKIAASGASEVTILWDNLAPPPLLQRFEWLLHSCIFYRVPKWIGELG NLCILKIAVRELVKNSVDILRGLPALMALSLNVHRASVENIFFDKVGFSVLKYFKYNCSV PWLKFEAGAMPNLRKLKLGFSALGDLYGTAPIRIGHLLGLKEISVKIHGASVDAESALTS AVSNHPSNPRINVQLVDKIFYGDRVTKEKDHGSEEEQNAIMSANFDEYHQTQDKESSDAN KQVGSIVPLPREQEHGILEHDEYAPKDPDKYKQSDIRSVSSMYPWHLKFLGALSIHGGTR LATAPRKAEDAYISYAMKGNMQDSVHMPDSSCYLSMLVLPMALDMKSHLYESFEVTLARA NTWLYASQASGVPIKLMSVQSDDLLTKISRVGDATSATVNSGLLPDLSNATLEDYQGYNT EVVKAARLWYSSIGGEMPLEITPKVGDTKLGFAISRTEEGFIYISSVLQDDNDSETPSTR SGMHNLFNRAREASKLLVISRVSNEKVLPWMISSSGAIRCFDTLSISQKLSLSRYPLCSF QLHLLMWEKPIHPAERSIHRPKMPFFF

Transcript Sequence

Transcript ID	Os10t0370100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:11649673:11657087:-1 gene:Os10g0370100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os10t0370100-01);Similar to NB-ARC domain containing protein, expressed. (Os10t0370100-02)
Sequence	GATAGTAATAATTACACAGGTTGAAGATCTTGCATTAACATGTTGCTGTTATGACACCGA ATATATTTTTGAGATGAAACCCATGGATGATGAGCACTCAACAACGTTGTTTCTTCAGAG ATTTTTTGGTTTTGTAAGTGATTGCCCTCAACAATTCAAAGAAGTTTCAAACAAAATTGT TCAAATATGTGGTGGTTTGCCTTTAGCAACAATCAGCCTAGCTAGCCTTTTAGCAAGTCA GCCTGTCATCTTAATGGATCTATGTTTATACATACGTAATTCTTTAAGCTCTGCTTTTAG GACAAATTCTTCTATAGAAGGAACGCGGCAAGTATTAAACCTCAGCTACAATAATCTTCC TCATTACTTGAAGACATGCTTGCTATATCTTAATATGTATCCAGAGGGTTATAAAATATG CAAGGATGATGTTGTGGAAAAATGGGTGGCTGAAGGTTTTATTGATCAAATAGAGGGCCG AGACTTGGAGAAAGTTGCAGGGAGCTATTTCGATGAACTTATTGACAGAAGATTCCTCCA ACCTAGCAGACTCAACTACAACAATGAGGTGTCAACTTGTACAATTCATGATGAGGTACG AGATCTTATTGCATACAAGTCTGTAGAGGAGAACTTTGTTCTGGTATTAGATTTTTACCG GAAGGATGTGGAACTTTCTGATAAAGTTCGTCGACTTTCTGTCCACTTTGGTGACATAAA GTATGCAAAAATACCAACAAACATCAGAACATCAGAAGTTCGATCACTTACATTTTTTGG ATTATGTAAGTGTATGCCTTCTCTTACAGAGTTTAAGCTTCTTCGTGTTCTAAACCTTCA ATTATCTGGTCATGTTGGTGATGAACTCTTAGACCTCAGTGGGATTTCTGAACTATTTCA ACTGAGATATTTGAAGATTGCATGCGATATTCGCACAGAACTACCAAGCCAAATGCGAGG GCTAAAATATTTAGAAACGTTGCAGATGGATACAACACTCACTGCTGTTCCTTGGGATAT TATCTTTCTCCCGTGCTTGTTACACCTCCATCTTCGTTTTGATATGAATCTGATTGATTT GATGGGCCACATGACACCTCCCAGCGAACTAGGATCAAGCAGTAGTAACTCATCACCCAG TGGGGGCATCATTAGCAATCTGAACAACGTACGGGATATTCATCTCACCTTCTGTGCACT GCCTTCCAAACATCTAGAGAGAAACATGGAAATTTTGGGCTCTTTGCTTGGAAGACTTGG TAATCTGAAAAATCTAACTCTAGTTTCTTCTTCCTCTCAAAAGAAAATTGCGGCTTCAGG AGCCTCAGAAGTAACTATTTTGTGGGATAATTTGGCACCTCCACCTCTTCTCCAGAGATT TGAGTGGTTGCTGCACAGCTGCATCTTTTACAGAGTTCCTAAGTGGATTGGAGAACTTGG CAACCTATGCATTTTAAAGATTGCAGTAAGGGAGCTTGTAAAGAACAGTGTTGATATTCT CAGGGGATTGCCTGCCCTCATGGCTCTATCTTTGAATGTGCACAGAGCATCTGTAGAAAA CATTTTCTTTGATAAGGTAGGATTCTCAGTTCTCAAGTACTTCAAGTATAATTGTAGTGT ACCTTGGCTGAAATTTGAGGCAGGGGCAATGCCTAATCTCAGGAAGCTCAAGTTAGGTTT CAGTGCCCTTGGGGATCTATATGGTACTGCACCTATCAGGATTGGACACTTGTTAGGCCT CAAAGAAATCTCAGTAAAAATTCATGGTGCAAGTGTCGACGCAGAGTCTGCATTGACATC TGCTGTTAGCAATCACCCAAGCAATCCTAGAATCAACGTACAGTTGGTGGATAAGATTTT TTATGGTGATAGAGTGACAAAAGAGAAAGATCATGGGTCTGAGGAAGAACAAAATGCTAT CATGAGCGCCAACTTCGATGAATATCATCAAACTCAAGATAAAGAGTCAAGTGATGCGAA CAAACAAGTTGGAAGTATTGTGCCTCTGCCACGGGAGCAAGAACATGGGATTTTAGAACA TGATGAGTATGCACCAAAAGACCCAGATAAGTACAAACAATCTGATATCAGGTCTGTATC ATCAATGTATCCGTGGCATCTGAAGTTTCTAGGTGCCTTATCAATCCATGGAGGCACAAG ACTTGCAACAGCACCAAGAAAGGCAGAAGATGCATACATCTCATATGCCATGAAGGGGAA TATGCAAGACTCGGTGCACATGCCTGATTCTAGCTGCTACCTCTCAATGCTTGTCCTACC CATGGCGTTGGACATGAAGTCACATCTATACGAGTCCTTCGAGGTCACCTTGGCTCGTGC CAACACATGGCTCTATGCCTCGCAGGCCTCTGGTGTCCCCATCAAGTTGATGAGTGTGCA GAGTGATGATCTTCTCACCAAGATATCGAGAGTTGGAGACGCCACATCTGCAACTGTCAA TTCAGGGTTGTTGCCTGATCTGTCAAATGCAACCTTGGAGGATTACCAAGGCTATAACAC TGAGGTGGTGAAGGCAGCCCGACTTTGGTACAGCTCCATAGGAGGAGAAATGCCACTGGA GATCACTCCTAAAGTAGGTGACACAAAACTAGGATTTGCAATCAGCCGTACTGAGGAGGG TTTTATCTACATATCTTCAGTGTTGCAAGATGACAATGACAGCGAGACACCGTCAACACG GTCAGGGATGCACAATCTGTTCAACCGGGCAAGAGAGGCATCGAAATTGCTGGTCATCTC AAGGGTGTCCAATGAGAAGGTCCTGCCCTGGATGATCTCTAGTTCAGGGGCAATCCGCTG CTTTGACACTCTCTCGATCAGCCAAAAGCTTTCCTTGAGCCGATACCCATTGTGCTCCTT CCAGCTGCATCTACTCATGTGGGAGAAGCCTATTCATCCTGCCGAGAGAAGCATTCATCG CCCAAAAATGCCTTTTTTTTTTTGAAAGAAGAAATGCCTTATTCATTGATACTCGATCCA GAACCTCATCAAATTATACCTAGAGTAGATGCTGAAGAGGGCAGAGTGGCGCACCTGAAA CACAGGATGTCATCATCACTTGTTACAACTTCTCCAGAAATGAAAGAAACATAAAACAAG ATGCTGCAGAAGTAGATGTATTTCAAAATTTCAGTTTGCGTCTGTTGTTTGTTTTTAAGA GTCTAATTAAGTTAGATGCTTCGCTGATCT