Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0370000-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:11629686:11634425:-1 gene:Os10g0370000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C71, protein phosphatase 2C 71, protein phosphatase 111 description:Protein phosphatase 2C-related domain containing protein. (Os10t0370000-01);Protein phosphatase 2C-related domain containing protein. (Os10t0370000-02)
Sequence	ATGGCGGAGCTGCCGCTGGCGGCGGGGCTGCTCGACCTGCGCCCCTGCAAGCTCGCCCCT CCCCCTCCCCCGCCCCTCCCCGTCTCCCCCTCCCCTCGCCACCACCGCCGCCCCCACTCC ACCGCCACCGCCTGCCGCGCCGCCCCCGACCTCCACTCCTCCACCGAGCTCGCCGACGGG AGCATCGTCTTCCGCTTCGCGCGCCCCCGGGACGACGACGACGAGGAGCAGCAGCAGCGG CGGGCGGACGCCGTGGCTCCCGAGGCCGCGGCCGTCGTCGAATCAGGGCTCGACGGTGAC GCCGCCGCAGCTGCTGAACCTGAGGCCCGGGATGGCGGTGGAGAAGGGGAGGTGACGGCG ACGGCGACGGGTTTGGACGCGGAGGAGGTGGTGGCGAGTGGAGGAGCGGAGGCGACGGCG ACCTCCGGTTTGGAGGATGCGGGGGAGGAGGCCTCGGATGGCTCCACCGCGCGGGATTCC GACACCGACGTCGACACCGAGTCCAGCGCCTCCACCGCCGCCGACGACGACCAGCCCGCC GAGTTCGCCGTCCCGCCGCCACCGGCGGAAGAAGTTTGTAACAAGGTAGATTGGGAAAAG GACACTTCAGAGGTGAAGAATACTGATAGGATGGTTCCAGTAGCCTCATCAACGCTTGTG TTGGCATCAGGTGCTGCGATCTTGCCTCATCCTTCTAAGGCAGCAACAGGTGGAGAAGAT GCATATTTTATTGCGTGTGATGGCTGGTTTGGTGTGGCTGATGGAGTTGGCCAGTGGTCA TTTGAAGGTATCAATGCAGGGCTTTATGCAAGGGAGCTAATGGATGGTTGTAAAAAGTTC ATTATGGAGAATCAAGGCGCTGCAGATATTAAACCCGAACAAGTTCTTTCCAAGGCTGCA GATGAAGCGCACTCTCCTGGTTCTTCCACTGTTTTGGTTGCTCACTTTGATGGCCAGTTC CTCAATGCATCGAATATTGGAGACTCTGGATTTCTGGTGATAAGAAATGGAGAGGTGTAC CAAAAATCAAAACCAATGGTTTATGGTTTCAACTTTCCACTGCAAATTGAGAAGGGCGAT AATCCCCTGAAACTTGTACAGAATTATACAATTGAGCTGGAGGATGGTGATGTCATTGTA ACAGCAAGTGATGGTCTTTTTGACAATGTGTATGAGCAAGAAGTAGCCACCATGGTCTCG AAATCTTTACAAGCCGATCTCAAACCAACGGAGATTGCTGAACACCTGGCTGCCAAGGCG CAGGAAGTTGGTAGATCTGCAGCCGGAAGTACCCCATTCTCAGATGCCGCTCTTGCAGTG GGGTACCTGGGTTTCAGCGGGGGCAAACTCGATGACATAGCCGTCGTCGTGTCCATTGTC AGGAAATCTGAAATCTAA

Peptide Sequence

PEP ID	Os10t0370000-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:11629686:11634425:-1 gene:Os10g0370000 transcript:Os10t0370000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C71, protein phosphatase 2C 71, protein phosphatase 111 description:Protein phosphatase 2C-related domain containing protein. (Os10t0370000-01);Protein phosphatase 2C-related domain containing protein. (Os10t0370000-02)
Sequence	MAELPLAAGLLDLRPCKLAPPPPPPLPVSPSPRHHRRPHSTATACRAAPDLHSSTELADG SIVFRFARPRDDDDEEQQQRRADAVAPEAAAVVESGLDGDAAAAAEPEARDGGGEGEVTA TATGLDAEEVVASGGAEATATSGLEDAGEEASDGSTARDSDTDVDTESSASTAADDDQPA EFAVPPPPAEEVCNKVDWEKDTSEVKNTDRMVPVASSTLVLASGAAILPHPSKAATGGED AYFIACDGWFGVADGVGQWSFEGINAGLYARELMDGCKKFIMENQGAADIKPEQVLSKAA DEAHSPGSSTVLVAHFDGQFLNASNIGDSGFLVIRNGEVYQKSKPMVYGFNFPLQIEKGD NPLKLVQNYTIELEDGDVIVTASDGLFDNVYEQEVATMVSKSLQADLKPTEIAEHLAAKA QEVGRSAAGSTPFSDAALAVGYLGFSGGKLDDIAVVVSIVRKSEI

Transcript Sequence

Transcript ID	Os10t0370000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:11629686:11634425:-1 gene:Os10g0370000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C71, protein phosphatase 2C 71, protein phosphatase 111 description:Protein phosphatase 2C-related domain containing protein. (Os10t0370000-01);Protein phosphatase 2C-related domain containing protein. (Os10t0370000-02)
Sequence	CTCTCTCTCGAGCTCATCTCCATTTTCAAATCTCTCTTTGCTTGCTCGAGGTGAGCCATG GCGGAGCTGCCGCTGGCGGCGGGGCTGCTCGACCTGCGCCCCTGCAAGCTCGCCCCTCCC CCTCCCCCGCCCCTCCCCGTCTCCCCCTCCCCTCGCCACCACCGCCGCCCCCACTCCACC GCCACCGCCTGCCGCGCCGCCCCCGACCTCCACTCCTCCACCGAGCTCGCCGACGGGAGC ATCGTCTTCCGCTTCGCGCGCCCCCGGGACGACGACGACGAGGAGCAGCAGCAGCGGCGG GCGGACGCCGTGGCTCCCGAGGCCGCGGCCGTCGTCGAATCAGGGCTCGACGGTGACGCC GCCGCAGCTGCTGAACCTGAGGCCCGGGATGGCGGTGGAGAAGGGGAGGTGACGGCGACG GCGACGGGTTTGGACGCGGAGGAGGTGGTGGCGAGTGGAGGAGCGGAGGCGACGGCGACC TCCGGTTTGGAGGATGCGGGGGAGGAGGCCTCGGATGGCTCCACCGCGCGGGATTCCGAC ACCGACGTCGACACCGAGTCCAGCGCCTCCACCGCCGCCGACGACGACCAGCCCGCCGAG TTCGCCGTCCCGCCGCCACCGGCGGAAGAAGTTTGTAACAAGGTAGATTGGGAAAAGGAC ACTTCAGAGGTGAAGAATACTGATAGGATGGTTCCAGTAGCCTCATCAACGCTTGTGTTG GCATCAGGTGCTGCGATCTTGCCTCATCCTTCTAAGGCAGCAACAGGTGGAGAAGATGCA TATTTTATTGCGTGTGATGGCTGGTTTGGTGTGGCTGATGGAGTTGGCCAGTGGTCATTT GAAGGTATCAATGCAGGGCTTTATGCAAGGGAGCTAATGGATGGTTGTAAAAAGTTCATT ATGGAGAATCAAGGCGCTGCAGATATTAAACCCGAACAAGTTCTTTCCAAGGCTGCAGAT GAAGCGCACTCTCCTGGTTCTTCCACTGTTTTGGTTGCTCACTTTGATGGCCAGTTCCTC AATGCATCGAATATTGGAGACTCTGGATTTCTGGTGATAAGAAATGGAGAGGTGTACCAA AAATCAAAACCAATGGTTTATGGTTTCAACTTTCCACTGCAAATTGAGAAGGGCGATAAT CCCCTGAAACTTGTACAGAATTATACAATTGAGCTGGAGGATGGTGATGTCATTGTAACA GCAAGTGATGGTCTTTTTGACAATGTGTATGAGCAAGAAGTAGCCACCATGGTCTCGAAA TCTTTACAAGCCGATCTCAAACCAACGGAGATTGCTGAACACCTGGCTGCCAAGGCGCAG GAAGTTGGTAGATCTGCAGCCGGAAGTACCCCATTCTCAGATGCCGCTCTTGCAGTGGGG TACCTGGGTTTCAGCGGGGGCAAACTCGATGACATAGCCGTCGTCGTGTCCATTGTCAGG AAATCTGAAATCTAAATTGTAAAAGACATCCATGATCCATGATGTCCCCCTCTCAAGTTT GGTTGAAGCTGCACTCCTAGCCTCCTAGCAAGGTGCACCACACTCATCAATATATTGTAC AACCAGAAGTGCAGCTGCTGAAAAAGACTATCTGTGAGCGAGGAGCAAGAGGCCATTAAC CTGTGTAAGTATCTTTGAGCCGAATTGCTCGCGGTTTTTGGGCTAATTTAGCATTGGAAA GTAATATTGTGATCCTTGGTTCGAGTTGTAAACCGGTGGAAGAAATCTGCCGTGTGTGTG AGAGACAACCGTGCATAGGAAAGGAACATACATTGATTATGTGACATGAACTGGAAATTG CCGCAAGACACCTCCTGGCACTGGCAACTGTAACCATCACACCTCATTTCACATTAACCT GATGTTTACCCATGG