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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0369500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:11596537:11599845:-1 gene:Os10g0369500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yippee-like protein domain containing protein. (Os10t0369500-01)
Sequence

ATGGGGCTGCTGTTCGTGGAGCTGCTCCCGCGGCACGGCGACGGGGGAGGCCCCGCGTCG
GCGGTGCTCAAGTGCCGCCGGTGCCGCGTCGACGCCGCCTCCGCCGACGCCATCCTCTCA
CGGGACTTCCGCGGCCGATTCGGCCGCGCCTACCTCTTCGACCACGTGTACGCGTCCTCC
CTCTCTCTCCCGCTTCCGCATTGCGTGTGCCTTGTGTTAGCTAGGCGGTTCTTGGGATGA

Peptide Sequence

PEP ID

Os10t0369500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:11596537:11599845:-1 gene:Os10g0369500 transcript:Os10t0369500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yippee-like protein domain containing protein. (Os10t0369500-01)
Sequence

MGLLFVELLPRHGDGGGPASAVLKCRRCRVDAASADAILSRDFRGRFGRAYLFDHVYASS
LSLPLPHCVCLVLARRFLG

Transcript Sequence

Transcript ID

Os10t0369500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11596537:11599845:-1 gene:Os10g0369500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Yippee-like protein domain containing protein. (Os10t0369500-01)
Sequence

GTACGGTAATAACCAGCTTATTCTCCATTCCTCCGGGAAGAAGAAGAAGAAGCCGGCGAC
TCGCCATTGATTCCGGCCGCCGCCGCCCCGCTCCCCCCTCGATCGGTCGATCCGGTGATG
GGGCTGCTGTTCGTGGAGCTGCTCCCGCGGCACGGCGACGGGGGAGGCCCCGCGTCGGCG
GTGCTCAAGTGCCGCCGGTGCCGCGTCGACGCCGCCTCCGCCGACGCCATCCTCTCACGG
GACTTCCGCGGCCGATTCGGCCGCGCCTACCTCTTCGACCACGTGTACGCGTCCTCCCTC
TCTCTCCCGCTTCCGCATTGCGTGTGCCTTGTGTTAGCTAGGCGGTTCTTGGGATGATGA
TGATGATGATCTTTGGCCCAAGGGGGTTTCGTTGGTGGTGGGGGTGTGTTCGAATCGGAT
CTTGCGGTGGTCGATTCGGCCTTCGTTTTGGGATGGAAATCGATGTGGGATTGGATTGCT
GGAAATGGGGGAGAAAAGAAGCTTTGGTTGTGCCACAATGTGGATGGATTCTGCTGGAAT
TAGCTTGCATCGCTGTTGTCGTCGTGGTCTTCTCTTAGATTATTATTATTATTATTGCAA
TGTCACAACTGAAGATTTGTGGTCGGATCGATCGATTAGCATGTTCGGGTGAATCGATTT
GCGGTATCAAATGGATGTTGTTCAAGCCTTCAATGTATCAAGTTTATTAGCTTTGGCCCC
TCTGGATTGCCTGCAGGAACGGACACCGATTTGATGAATGATGGGCTCAGCCATTGCCAT
TGCCTCCTTGGGGGTGGTTTTCTTAGGAACTTGGTAGTAGCATTTTGTCTTGTTCGGATC
ATTGCCCTTGATTTATCGCCTAATATCACTGCGATCCCCATGCTGTTTTCTCAACCTCCT
ACTGTATTTCTCTACAAGATTGACCACCTTAATACCAGCTCAACCATTTCTTCAGTGTAT
TCTAGAGCTAATTTTGTGATACTGATGTAGTTTTGGCTTCAACAACTAGTTTTCACTTCG
AATCATGGCAATGTATTCAGCTTATTTGTAGAATGTTTCACTTCGAATCATGGGAATGTA
TTCAGCTTATTTGTAGAACGTTTCACTTCGAAACATGGCAATGTATTCAGCTTATTTGTA
GAATGTATTCAATATCTTTATGCTTTTGTTCTATTCTTTTCAGGGTGAATATATCCTTAG
GGCCTAATGAGGATCGGTATCTGATGACCGGACTGCATACGGTGAAAGATATCTACTGTA
GCTGTTGCCAGCAAATTCTCGGCTGGAGATATGTAAGTTAACTTGGAAATTTGCTTCCAT
GATCATATAATAGTTGCCTCTTATGCAGATTAGATATGTGCATTCCGTGGAGAAACTTGT
AGAATGTTGCATTCTGAAAACAAAAAAGTTGGATACAAACATGAGTTGAACAAACAGTGG
ATAGGAAAATAGGAGTCTCTATGCTTCTTTTCACCCTCTTCTACAGTTCTACTTGTAGTA
TTTCTTCCTTCTACTCCAACTTAAAGAATTCTCAGATTTCCATAGGCTCATTGTCCTATC
ACATAATTAGTTGCTACCTTAGCCCAGACTTTGCATTAGCCACATCATTTTGTCTCAGTT
TGTTATGTAATTTTATTCTCATTGCGATCAATTGATAGGATATGCATGTATCTCAAATTC
ATAATATGCTTGGTTCAGTACTTCAGTTGGATATGTAAAATTTTCAGATTGATGTCTATT
TTTCAGATGTGAATGGCAATGCTACCAGTCAATTATAGTCAACAAACTTAACATATAAAT
GTGCATCAAATTCAGCTTTCAAAAATATTATGCTTTGTTTTAGGCTTTCTATTGTAGGTT
AGGCCTACACTTAATCCATAACCATTCAATATAATAACAAAGTCTTATGTTTAATACTCC
CTTCATCCCAAAATATAAGCATTTCCGGCTATGAATTTGGAAAAGTATCTGTCCAGAGTC
ATAGCGAGAAGTGGACGGAGGGAGTAGCTAGTTTTGCATTTGATAGATGAGGACTAACAT
TTTAACAAAATACAACTTGATGCTGAAACATAGTATCCACAAAACACTAGTGTAGGCCTG
TGGGGCCTCCTATGTTACCAGCACGATAATGTGGCCTTCTATGGTACTAAAGATTTAGTT
GCTGTTTGCTGTGGAACTGGAATATGTTGGGTTAGATTCTGTATAAACCATTTGTTTGCC
TTCATATCTAGCTCATCATTGCAACTACATATGAACTGTAGTTTTCTAGTAATCCTGTGT
AATAACTGCATTATACAGCTATTTTCTCATCTGAAGTTCTGTGTTTTGTGACTTCCAGTC
AATTTTGTATGCTACTATTCTAAGCCCTATGTCCCATGAAGATTCAAGGCACAGATCCTG
CAAGTCGTTTAGAAATTTTGCATTGTTCTTGTACCCATTGGTTCCATCCTGGCATTTAAG
GGAGTACATCAACTGTATTTTTTTTTATTGCAGTTACAGTGGCATCTTTCCCTTAATTAA
AGTTGCTTGAACCGACCTCTACTGAAATTCACTTTGTTTAATAAACCCTGAATGTGGCTT
ATCTTCACCTATATGCTAAGTTGCGCATCTAAGGTTCTCTTTCAGTTGCGTGTGGGTAAC
TGCTAACTTCTGTTTTTTTTTTCATAGCTTCTCTTTCAATTTTTCATAACTGGGAGAATT
TATGTGTTTGTGACATGTACTCACCCATTCATCGTACGTATTAGCAATGCAATAACTTTG
TTCTGGCATCAATACAGCTCATTTACCATATTATCTCGATGTGACAGTCTTCAGCTCTTA
ACACTGCTTCATTTGTCACCTCATTGTTTTATTTTCTCTTTTTGGATTGTTAATTTGCAC
CTATAATGCTCTACAGGAGAAAGCATACGAAGAGAGCGAGAAGTACAAGGAAGGCAAGTT
CATCCTGGAGAAGGCCAGGATGTGGAAAGAAGCCCGGTGAAAAAGACTGGCGCCATGGAA
CTCATCAACCTGTATGTATGTATTTTGTGTAGATCCAAAACAATTCAAAGATTGTAACAA
CAACTTTGGCGGCGATCAAAGTTTGTATGCATGCTGTAGTTGCTCATGCAGTACTAGACC
CCCTCAAAAGAAGAGATGAAAACAGCTGCGTCTGATTTGGGGGGGACGAAGATTGACAAC
AGAAGTAGAGCATCACTGTCTTTTTGATGCAAATTCTGGCACTTCGGTGGTAACGGTTTT
AACCGAAAAATGATGAAGTGCCAGAGATTAACATTTGATTAGTGCTTTTGGCCACTCATG
GCGCAGTTC