Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0366400-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:11460709:11464087:1 gene:Os10g0366400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0366400-01);Hypothetical conserved gene. (Os10t0366400-02)
Sequence

ATGAACTTCTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGGTGGGCTCGAC
AATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGCCTCTTGCCTT
GAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTCCGTAAAAGAG
ATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAACTGTTCTGAT
GGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAACTGATGGCATA
CAATCTGCCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAATTGATAAGTAT
GACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGGTGCGTTTTAC
TGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCCCAAACTATCC
AAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCATTGGGGCTGGA
ATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTTCTTTTGCCCA
CGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAGGTTTTATGAT
TTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGGGTTGAATAGG
CAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCATGCTGATGGGC
CGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTCCGAGTTTGTT
GGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTTGGATGGTGAT
GGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGTCGATCTCAAT
GAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGA

Peptide Sequence

PEP ID

Os10t0366400-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:11460709:11464087:1 gene:Os10g0366400 transcript:Os10t0366400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0366400-01);Hypothetical conserved gene. (Os10t0366400-02)
Sequence

MNFCYDLVKANKRSLIGGLDNIKNQYDNPECIAYSIASCLEIADRIKTVLQGKNPDSVKE
IDPTAIVDMFDGKCLANCSDGTSGIGKLVTMALAVQTDGIQSADHSRLYTAVAVETIDKY
DFEGICATLADGIPLVGAFYCGSRLEKLEYCQIYRVPKLSKFLDRNLIPTGHAAVIIGAG
MRCGIQYLYFLNSWGNFFCPRYDKDGNLVKAGVGKLRFYDLLCNPIMFITDSAKRVGLNR
QLLPMGTGKLSDHNKSMLMGRKQTDVIPEDLSIGVTSEFVGNQPQISSKRKMANATLDGD
GQTQKRNKCRTFGRSSVDLNEANNKRNAKEDEM

Transcript Sequence

Transcript ID

Os10t0366400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11460709:11464087:1 gene:Os10g0366400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0366400-01);Hypothetical conserved gene. (Os10t0366400-02)
Sequence

AATGAACTTCTGCTATGACCTCGTCAAGGCAAACAAGCGTTCTCTGATTGGTGGGCTCGA
CAATATCAAGAATCAATACGATAATCCTGAATGTATCGCCTATTCTATAGCCTCTTGCCT
TGAGATAGCAGACAGGATTAAGACGGTTCTTCAGGGAAAAAATCCCGACTCCGTAAAAGA
GATAGACCCAACTGCCATTGTTGACATGTTTGATGGTAAGTGCTTGGCCAACTGTTCTGA
TGGCACATCGGGAATCGGAAAACTTGTTACAATGGCGCTTGCTGTCCAAACTGATGGCAT
ACAATCTGCCGATCATTCAAGGCTTTACACTGCTGTAGCAGTGGAAACAATTGATAAGTA
TGACTTTGAAGGGATATGTGCCACACTTGCTGATGGCATTCCGCTTGTTGGTGCGTTTTA
CTGCGGCAGCAGATTGGAAAAGCTTGAGTATTGCCAAATTTACAGAGTGCCCAAACTATC
CAAATTCCTGGATAGAAATCTGATTCCTACTGGCCATGCTGCTGTTATCATTGGGGCTGG
AATGCGCTGCGGGATACAATATTTGTATTTTCTAAATTCGTGGGGTAACTTCTTTTGCCC
ACGCTATGACAAAGATGGTAATCTTGTGAAAGCTGGAGTTGGAAAGTTGAGGTTTTATGA
TTTGCTCTGCAATCCGATTATGTTCATAACAGATTCTGCCAAGCGTGTTGGGTTGAATAG
GCAGCTACTGCCTATGGGCACTGGGAAGCTGTCAGATCACAACAAGAGCATGCTGATGGG
CCGAAAACAAACTGATGTTATACCTGAAGACCTATCTATTGGCGTAACCTCCGAGTTTGT
TGGGAATCAACCACAAATTTCTTCAAAAAGAAAAATGGCTAATGCCACTTTGGATGGTGA
TGGTCAAACTCAAAAGAGAAACAAGTGTAGAACTTTCGGCCGAAGTTCTGTCGATCTCAA
TGAAGCCAACAACAAACGGAATGCAAAGGAAGATGAGATGTGAGGTCATGGGGATGAAGA
ACCCTGCAGACATACTTTTGCTTTGTGAAAAAGGGCCTGATGTTTTTTGCTCTGAGAGTT
GGTAGGGTTTGTGAGCCACCTCACCAAGCATCAATGATGCATATTTTTCATTATGCTACA
CTTGGATGTCTCAATTTAATCTACTGAGACTCTTTTTCGTTGATGATCACTGGCTCACTG
CTCATGTAAATCCTGGAGAGTATTTATTGTTG