Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0363500-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:11289218:11290800:1 gene:Os10g0363500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os10t0363500-00)
Sequence	ATGCCGCCGCCGCCGCCGCGCGCGCTGCCGCTGCCGCACTTCACCCTCCCGCCGCTCGCC GGCGAGGACCTCCTCTTCGTGACCGCCCTCCGCGCCCACCTCTCCACCGCGCCGCCGCCG CCGACGACGACCGCCGCCTCCCTCTCCCGCTTCCTCCCCCACCTCACCCCGCTCCGCCTC TCCCACCTCATCCTCGCGCCCCCGCCCCCGCCCCGCCACGACGACAGCGGCCACCTCCTC CTCGCCTCCCTCCTCCCGTCGCCGCCGCCGCCGCTCCCCTTCGCGCTCCTCCTCCACTCC CTCCGCCCGCGCCGCTCCTCCGCCCTCCTCGCCTCCCTGCTCCCTTCCATCCCGCACCAC GCCTTCCCGGACCTCCTCCACCACGTCCTCCTCACCGCCCGCCTCACCGCCGCCCGCCCC GATGGCGGCGCCGTCCCGGCTCTCGACGTGCTCTTCTCCGTCTGCGCGCGGGGGAAGAAG CTCTCCCTGGCCACGCTCGCGTTCCGCGCCATGCGCGCCCACGGCCTGCTCCCCCGCGTC GTGTCCTGCAACGTCTTCATCTCCGCCGCGCTCGGCCTCAGGCGCCCCGAGATCGCCCTG TCATTCTTCCGGGAGATGCGGCGGTGTAGGATCTCGCCGAACATCTACACGGCGAACATG GTGCTGCGGGCGTTCTGCGATCTTGGGCGGACCGCGGATGCGGCCGAGGTGCTCGACAAA ATGCCGGAGTGGGGCGTTGGAAGGACAACGGTCAGTTTCAACACGCTGATCGCGGCTTAC TGCAGGGATGGTGTTGACGCAGGGCCTGCGCTGCAGCTGAAGATGAAGATGGAGCAGGAG GGGTTGGTGCCTGACGTGGTGACGTACGACACGATCATCCATGGGCTGTGCAAGGAGGGG AGGATGGGAAAGGCGAACCAGGTGCTGAGCGAGATGAGGGTGAAGGGGGTTATGCCCAAC ACGGTCACGTATAACACGCTGATTCATGGGTACGTGGCGCTTGGTGATAATGCCATGGCG GGTAGGGTTCATGAGGAGATGGTGAAGAACCGAGTGGAGCTTGATATCGTGACATACAAT GCGCTCATTCTTGGGCTTTGCAATGAAGGGAAGATGAAGAAGGTAGAGCACTTGCTTCGG GAGCTTGACAGGGCTAAGCTTGAACCGAATGCATCAACCTTTTCAGCGCTGATTGTTGGG TGGTGCAAGATGCAGAACTCAGAGAGAGCACTACAGCTGTTGAATGTGATGAAGAAAAGT GGCTTCCATCCAAATTACACCACTTATAAGATGGTTATATCTTCTTTCTGCAAGAACAAG GATTTAGAAGGAGCAGTTGATGTGATGGGGGATATGTTGGGGAGGTGCATTGCTCCTGAC AAGGCCTTGTTGAATGAATTTTTTGATGGTCTCTGGAAGGCTAAAAAATTACATCTGGCA GAGAACCTCCGATCACTGAATAATGGTTTGAAGTTCATTCCTGATGTCTACTATACTGGT GATTACAGGAATAAGGATGAAGTGATAAACAGATGCTAA

Peptide Sequence

PEP ID	Os10t0363500-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:11289218:11290800:1 gene:Os10g0363500 transcript:Os10t0363500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os10t0363500-00)
Sequence	MPPPPPRALPLPHFTLPPLAGEDLLFVTALRAHLSTAPPPPTTTAASLSRFLPHLTPLRL SHLILAPPPPPRHDDSGHLLLASLLPSPPPPLPFALLLHSLRPRRSSALLASLLPSIPHH AFPDLLHHVLLTARLTAARPDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRV VSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDK MPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEG RMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYN ALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKS GFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLA ENLRSLNNGLKFIPDVYYTGDYRNKDEVINRC

Transcript Sequence

Transcript ID	Os10t0363500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:11289218:11290800:1 gene:Os10g0363500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat containing protein. (Os10t0363500-00)
Sequence	ATGCCGCCGCCGCCGCCGCGCGCGCTGCCGCTGCCGCACTTCACCCTCCCGCCGCTCGCC GGCGAGGACCTCCTCTTCGTGACCGCCCTCCGCGCCCACCTCTCCACCGCGCCGCCGCCG CCGACGACGACCGCCGCCTCCCTCTCCCGCTTCCTCCCCCACCTCACCCCGCTCCGCCTC TCCCACCTCATCCTCGCGCCCCCGCCCCCGCCCCGCCACGACGACAGCGGCCACCTCCTC CTCGCCTCCCTCCTCCCGTCGCCGCCGCCGCCGCTCCCCTTCGCGCTCCTCCTCCACTCC CTCCGCCCGCGCCGCTCCTCCGCCCTCCTCGCCTCCCTGCTCCCTTCCATCCCGCACCAC GCCTTCCCGGACCTCCTCCACCACGTCCTCCTCACCGCCCGCCTCACCGCCGCCCGCCCC GATGGCGGCGCCGTCCCGGCTCTCGACGTGCTCTTCTCCGTCTGCGCGCGGGGGAAGAAG CTCTCCCTGGCCACGCTCGCGTTCCGCGCCATGCGCGCCCACGGCCTGCTCCCCCGCGTC GTGTCCTGCAACGTCTTCATCTCCGCCGCGCTCGGCCTCAGGCGCCCCGAGATCGCCCTG TCATTCTTCCGGGAGATGCGGCGGTGTAGGATCTCGCCGAACATCTACACGGCGAACATG GTGCTGCGGGCGTTCTGCGATCTTGGGCGGACCGCGGATGCGGCCGAGGTGCTCGACAAA ATGCCGGAGTGGGGCGTTGGAAGGACAACGGTCAGTTTCAACACGCTGATCGCGGCTTAC TGCAGGGATGGTGTTGACGCAGGGCCTGCGCTGCAGCTGAAGATGAAGATGGAGCAGGAG GGGTTGGTGCCTGACGTGGTGACGTACGACACGATCATCCATGGGCTGTGCAAGGAGGGG AGGATGGGAAAGGCGAACCAGGTGCTGAGCGAGATGAGGGTGAAGGGGGTTATGCCCAAC ACGGTCACGTATAACACGCTGATTCATGGGTACGTGGCGCTTGGTGATAATGCCATGGCG GGTAGGGTTCATGAGGAGATGGTGAAGAACCGAGTGGAGCTTGATATCGTGACATACAAT GCGCTCATTCTTGGGCTTTGCAATGAAGGGAAGATGAAGAAGGTAGAGCACTTGCTTCGG GAGCTTGACAGGGCTAAGCTTGAACCGAATGCATCAACCTTTTCAGCGCTGATTGTTGGG TGGTGCAAGATGCAGAACTCAGAGAGAGCACTACAGCTGTTGAATGTGATGAAGAAAAGT GGCTTCCATCCAAATTACACCACTTATAAGATGGTTATATCTTCTTTCTGCAAGAACAAG GATTTAGAAGGAGCAGTTGATGTGATGGGGGATATGTTGGGGAGGTGCATTGCTCCTGAC AAGGCCTTGTTGAATGAATTTTTTGATGGTCTCTGGAAGGCTAAAAAATTACATCTGGCA GAGAACCTCCGATCACTGAATAATGGTTTGAAGTTCATTCCTGATGTCTACTATACTGGT GATTACAGGAATAAGGATGAAGTGATAAACAGATGCTAACACACAAAGACAACAATCAAG TCTTATGAGAATGTACAGTTAGT