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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0361900-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:11185582:11186269:1 gene:Os10g0361900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361900-00)
Sequence

ATGAAGCTTACCATGAACAAGCTTTCCCTCGCCCTCGCCAGCTACCTCATCCTCTTCCTC
GCCGCCGCGGCCACCGCCGCCACCACACGATGCACGTTCGAGATCGTCGTCAAGACCGAC
GGCCGGAGGAACGCCGGCACCGACGCCCGCGTCTCGCTGCAGGTGCGCGCCGCCAGGGGC
CCGACGCTGACGGTCGCCAACCTGGAGTCGTGGGGCCAGATGGCCGCCGGCCACGACTAC
TTCGAGAAGGGGAACCTCGACCGGTTCAGGGGCGCCGGCGACTGCATGCCGTCGGAGCCC
TGCAACATGGTGCTCACCTCCGACGGCTCTGGGAACAAGCCCGGGTGGTACGTGAGCTAC
GTGATGGTGACGCAGCTCGGGCAGGGGAGACTCCCGTCGATGACGCACCGGTGGGCGGTG
GATCAGTGGCTGGCCATCGACGAGGCGCCGCACATGCTCACCGCCGAGCGGAGGGGCTGC
GGCATTGGCGCGGCGGCACCATGA

Peptide Sequence

PEP ID

Os10t0361900-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:11185582:11186269:1 gene:Os10g0361900 transcript:Os10t0361900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361900-00)
Sequence

MKLTMNKLSLALASYLILFLAAAATAATTRCTFEIVVKTDGRRNAGTDARVSLQVRAARG
PTLTVANLESWGQMAAGHDYFEKGNLDRFRGAGDCMPSEPCNMVLTSDGSGNKPGWYVSY
VMVTQLGQGRLPSMTHRWAVDQWLAIDEAPHMLTAERRGCGIGAAAP

Transcript Sequence

Transcript ID

Os10t0361900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11185582:11186269:1 gene:Os10g0361900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361900-00)
Sequence

ATCACATATACCACATCCAATAACAAATAACATGAAGCTTACCATGAACAAGCTTTCCCT
CGCCCTCGCCAGCTACCTCATCCTCTTCCTCGCCGCCGCGGCCACCGCCGCCACCACACG
ATGCACGTTCGAGATCGTCGTCAAGACCGACGGCCGGAGGAACGCCGGCACCGACGCCCG
CGTCTCGCTGCAGGTGCGCGCCGCCAGGGGCCCGACGCTGACGGTCGCCAACCTGGAGTC
GTGGGGCCAGATGGCCGCCGGCCACGACTACTTCGAGAAGGGGAACCTCGACCGGTTCAG
GGGCGCCGGCGACTGCATGCCGTCGGAGCCCTGCAACATGGTGCTCACCTCCGACGGCTC
TGGGAACAAGCCCGGGTGGTACGTGAGCTACGTGATGGTGACGCAGCTCGGGCAGGGGAG
ACTCCCGTCGATGACGCACCGGTGGGCGGTGGATCAGTGGCTGGCCATCGACGAGGCGCC
GCACATGCTCACCGCCGAGCGGAGGGGCTGCGGCATTGGCGCGGCGGCACCATGATTGGT
TGAACGATCCAGCTATAGCTCCATGTCAATCACCAGTGCTGTAGTAACCTAAATGAATAA
ATAAGTTGGGCACAGCTAGTGTATATGCTTTGCCTAGTGTAACGTGATGGAAATAAGTCA
ATTCAATCGGACTGAATTGCCGCAGTTT