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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0361000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:11110251:11110999:1 gene:Os10g0361000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361000-01)
Sequence

ATGAAGCTTACCATGAAGCTTTCCATCGCCCTGGCCTGCTTCCTCTTCTTCCTCGCGGCG
GCGACCACCGCCTCCGCGCAGTGCACGTTCGAGATCCTCGTCAAGACCGACGGCCGGAGG
AACGCCGGCACCGACGCCCGCGTCTCGCTGCAGGTGCGCGCCGCCAGCGGGCCGACGCTG
ACGATCACCAACCTGGAGTCGTGGGGCCAGATGGCCGCCGGCCACGACTACTTCGAGAAG
GGGAACCTCGACCGGTTCAGGGGCGCCGGCGCCTGCATGCCGTCGGAGCCCTGCAACATG
GTGCTCACCTCCGACGGGTCCGGCAACAAGCCCGGGTGGTACGTGAGCTACGTGATGGTG
ACGCAGCTCGGGCAGGGGAGCCTCCCGTCGATGACGCACCGGTGGGCGGTGGATCAGTGG
CTGGCCATTGACGAGGCACCGCACATGCTCACCGCCGAGCGGAGGGGCTGCGGCATTGGC
GCAGCGGCGCCATGA

Peptide Sequence

PEP ID

Os10t0361000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:11110251:11110999:1 gene:Os10g0361000 transcript:Os10t0361000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361000-01)
Sequence

MKLTMKLSIALACFLFFLAAATTASAQCTFEILVKTDGRRNAGTDARVSLQVRAASGPTL
TITNLESWGQMAAGHDYFEKGNLDRFRGAGACMPSEPCNMVLTSDGSGNKPGWYVSYVMV
TQLGQGSLPSMTHRWAVDQWLAIDEAPHMLTAERRGCGIGAAAP

Transcript Sequence

Transcript ID

Os10t0361000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11110251:11110999:1 gene:Os10g0361000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase, LH2 domain containing protein. (Os10t0361000-01)
Sequence

CACAGCAAATCACTCCACTCCTCCACTCATACACCACCACACTGCACACACACCCAACAA
AGATGAAGCTTACCATGAAGCTTTCCATCGCCCTGGCCTGCTTCCTCTTCTTCCTCGCGG
CGGCGACCACCGCCTCCGCGCAGTGCACGTTCGAGATCCTCGTCAAGACCGACGGCCGGA
GGAACGCCGGCACCGACGCCCGCGTCTCGCTGCAGGTGCGCGCCGCCAGCGGGCCGACGC
TGACGATCACCAACCTGGAGTCGTGGGGCCAGATGGCCGCCGGCCACGACTACTTCGAGA
AGGGGAACCTCGACCGGTTCAGGGGCGCCGGCGCCTGCATGCCGTCGGAGCCCTGCAACA
TGGTGCTCACCTCCGACGGGTCCGGCAACAAGCCCGGGTGGTACGTGAGCTACGTGATGG
TGACGCAGCTCGGGCAGGGGAGCCTCCCGTCGATGACGCACCGGTGGGCGGTGGATCAGT
GGCTGGCCATTGACGAGGCACCGCACATGCTCACCGCCGAGCGGAGGGGCTGCGGCATTG
GCGCAGCGGCGCCATGATCATCGAGGTAGCTGCCTATAGCTCCATCGACCAGTGTTGTCT
CTGCGTGCATCAGCATGCTAGTAACTTAAATTAATAATAAGTTCCAGGTCTAAGCCCTGT
ACTATGTGTGGGGCACAGTGTCTGCTTTGCCAATGTAACGTGATCATAATAAGTCAATTC
AATTCAGAGAGTGAATTGCAGTTTGTGCC