Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0360900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:11088021:11098028:-1 gene:Os10g0360900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0360900-01);Hypothetical gene. (Os10t0360900-02)
Sequence

ATGGCATCGCCTGATGCATGTGTGGAGGACAAAGTTCATCGCATCTTCTTGGATTTCATG
ACCAAGGTTGCACGGTATGACGAGCTAGTTGATGCAGGTAAAAAGGTTCTTCTCAAGTTT
CATCAAGAGGTAGAACATTTTTGGAGACCAAAGCTCCTCACAGAGTCAAGTGCCATAATT
GAGATAGTTAAGTCTAACTACAGTGACAGAATGAGGTCTTATCTTGAAGCTGGCTGCACC
CATCACAATGAAATCATCCAGAACATGAACCGGTTACATGCTTATCAGGAGAAACTTAAT
GACCATATAAATAAAGCCAAATTATTGCTGGAAGAGCTCCAGTTTCTGGAGGAAGATGTT
TACAGTGCTGCACTAACAGCCAGTCTGAGTTCTTCAAGAAATACGGATGATTGCCCTGAT
CATGATAATCTTACAAATGTTTGTTCTGAGGATGAACAACAGCCTGAAGATTGGCTGGAC
GGAGCAGTGTCTTTTGCAAGTGTGATTGTCCTGGTTCACAATATGTTAAAAATGGATTAC
ATGATGCAGGAAAAGATTGTAAAGGCATTTTGGGTTAAAACATCATCGTCGGAGATAGAG
GGCTACTGTCAAATGTGGGATTTGCGGCCATACATCGATGACAATGTGATGCAGCTGGCC
TGGCAGCTTGTTCCTTAG

Peptide Sequence

PEP ID

Os10t0360900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:11088021:11098028:-1 gene:Os10g0360900 transcript:Os10t0360900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0360900-01);Hypothetical gene. (Os10t0360900-02)
Sequence

MASPDACVEDKVHRIFLDFMTKVARYDELVDAGKKVLLKFHQEVEHFWRPKLLTESSAII
EIVKSNYSDRMRSYLEAGCTHHNEIIQNMNRLHAYQEKLNDHINKAKLLLEELQFLEEDV
YSAALTASLSSSRNTDDCPDHDNLTNVCSEDEQQPEDWLDGAVSFASVIVLVHNMLKMDY
MMQEKIVKAFWVKTSSSEIEGYCQMWDLRPYIDDNVMQLAWQLVP

Transcript Sequence

Transcript ID

Os10t0360900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:11088021:11098028:-1 gene:Os10g0360900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0360900-01);Hypothetical gene. (Os10t0360900-02)
Sequence

AGTGTAGCCCTCCCTTTTCCTCGCGTCCCGTGTTCCCTCGCCGCGCCGCCGTCGCCGTCG
CCTTCCTCCATCCCGCCCGCGACCAGCGTTGCCGCCACCGGGGCTCTTGTCGTGGCCAAG
GAAGCAGCGAGTCGGGAATGGCATCGCCTGATGCATGTGTGGAGGACAAAGTTCATCGCA
TCTTCTTGGATTTCATGACCAAGGTTGCACGGTATGACGAGCTAGTTGATGCAGGTAAAA
AGGTTCTTCTCAAGTTTCATCAAGAGGTAGAACATTTTTGGAGACCAAAGCTCCTCACAG
AGTCAAGTGCCATAATTGAGATAGTTAAGTCTAACTACAGTGACAGAATGAGGTCTTATC
TTGAAGCTGGCTGCACCCATCACAATGAAATCATCCAGAACATGAACCGGTTACATGCTT
ATCAGGAGAAACTTAATGACCATATAAATAAAGCCAAATTATTGCTGGAAGAGCTCCAGT
TTCTGGAGGAAGATGTTTACAGTGCTGCACTAACAGCCAGTCTGAGTTCTTCAAGAAATA
CGGATGATTGCCCTGATCATGATAATCTTACAAATGTTTGTTCTGAGGATGAACAACAGC
CTGAAGATTGGCTGGACGGAGCAGTGTCTTTTGCAAGTGTGATTGTCCTGGTTCACAATA
TGTTAAAAATGGATTACATGATGCAGGAAAAGATTGTAAAGGCATTTTGGGTTAAAACAT
CATCGTCGGAGATAGAGGGCTACTGTCAAATGTGGGATTTGCGGCCATACATCGATGACA
ATGTGATGCAGCTGGCCTGGCAGCTTGTTCCTTAGAAGCTACAAAAACAACGGAGAAGAT
GAACAGCAGCACCCATGTTTGACAGGCAGGAAAACATTGACGATCAAGAAATATAATCCG
AGGATTGAAGAAAGTAAGATTATAGATGAAAAAGCTGCCAACATTGGAATAATGAGCTTA
TTCTTTCTTTTGGATGCTGAAGCAGAGCAGACAGTCAACTCATCCATTGGAACATTGGTG
CAAAGGTGTGGATTTCCTTGGACAAACACCTTATTTCTGTCCGCAAAGATTCCATCTACT
GGAATTGGCCCCTCAAAGTTGTTGTATGACATATTTAGATATTGTAATGAGGTGAAAGTC
CCAAAGAAATCCGGTATTGCACCAGATAAATTGTTCTGGGAGAAATCCAGCACTTTGGTG
CCCCTGAGATTTGCTAATGATTGTGGAATACTTCCCTCTAGGAAGTTGCCTCCTACACGA
AGCGATTCCAACCGGACGCAAGAACCAAGTGTAGATGGGATCCTGCCTGTGAGTTTGTTG
TGGGAAATGTTCAAAGAAGCAAGATTTATCAAGCTACCAAGTTCTAGTGGTATGGAGTTT
ATGAATTGGTTGTGTGATAAATCGAGTAGCCAGCTCAATTGATTTAGCTTGATAAACATG
TCTCCGCTTATGCTTCCAGTAAGGGCATTACATGAAAGGTTCAATGCCAACAATTGTTGG
CACCTCGATAAAGTTGCAGGTATTCTTCCAGTCAGTTGATTTTCTGCTAAATAGAGTTCA
GTCAATCGATTCAAGTTACCAATGGATTGTGGTATTTCTCCAGAGAATATGTTTTGTGAA
AGGCTAAGGACAACAAGATTGTTTAGTTGGCCAAGAGTATGAGGTATGCTCCCTGTCAAT
AGATTGTTACCAAGATAAAGTAGGGATATGCTAGATAGGTTTCCAATCTCCAAAGGAATG
GTGCCAGATATGTAGTTTGACGGAAGAGCTAGTGAAGTTAATGTTTTCGGCAATTCGGCT
ACAGAGCTGGGCATGTCCCCGCGTAGGTTGTTTTCGCCAAAGTGCAGTTTCTGCAAATTG
GAGCAATTCTTCAAGGATGACAGGAATGCCCAGTCTCCAGCTTCTAACTGGTTTGAGTAC
AGCATGACGACCCGCAAATCTGTCATCAAGCCGAAAGAAGGAATCACCCCTCTCAAAGAG
TTGTTGGCCAGATACAGGAACTGCATGTTGGAAGCATTTGCTAGAGATTTAGGGATTTCT
CCATGAAAATGATTGTCAGACATAATCAGAACTTGGATGTTAGGAAGAGTGTTTCCTATA
CCAGGAGGCATTATCCCCTCAAGATTGTTGTTGGCCAAACCGAGAAATGTGATTGACGAC
ATGTTGTAAACGGAGGGATTTACAGTTCCAGAAAGATTGTTGTAAGAGAGGTCAAGATAC
CGTAGCGCCGATAGTTTACTAAAATCCGGTATACTTCCCTGCAACTGGTTTTCTGCAGCT
AAGAGTGCTGTAAGCGATGAGAGATTCCCTAGAGATGGTGGTATGCCTCCTGTCAGGCTA
TTCGTTGTAAGATCAAGGTTGGTGATCTGGGAAGGGAATATTGTTACGGGTGGAATTGCA
CCAGAAAGATTGTTTTCTCCAAGGTATATTTCCCTGATGGTTGAGCTGTTGAAAAGTGCT
GCAGGGATGCTCCCATAGAGGCTATTGTTCTTCAAGGAAAGATAGCGGAGCGAGGACGCA
TTAGCCAAGAACAATGGGATTCCTCCGGTCAGGTAGTTGTCGGCGAGACCGACGGATTCC
AAGGCAGATGAGCTCCCAAGCAACGGCGGGATCTCGCCATGAATGTTGTTGTTTGTTAAG
TCCAGGGACGAAAGGTTGCGAAGCGTACCAAGGCGTTTTGGGATCGCACCGCCGATCGCG
TTGAAGCTGAGGTTGAGGTATCGGAGCCCGGCAACATCGGCTGCGGATGCGAGGCCACCG
GAGAGGCCATTGTTGGGGAGGTGGATTCTCGTGAGGGACGAGAGGTTGGAGATGCAGGGT
GGGATTTCTCCGCTGAGGCCCTGTGCCTCCATGTCCAAGGCCACGACCAAACGAGGCTTT
GGGAGCTCGCTGGAGCATGTCACGCCGCGCCAGGTGCACATGTCGAGCGAGGTATTGTTC
CATGTGGTGAGGGCGCCTCCCTCTGGGCTTGAGAGGTGTGATTTGATGCAGAGCAGAGCT
TCCCGTTGGTTATTGTCGGATTCGTCAGCTATTGCTAATGCTGTAAGGGAGACGAGCATT
GCTACGACTGCAATGTGTATAGCTGCACATACCATCTTTGCTGGTGTGTATTTTGGACAA
TATGGTTTCAGTTTTTAGATGCTTTTGATTCTTATAGTGGACTAGGACATTTATATTAAT
AGGCGTTTATACATCTTTTACCCATGTTGATTGTTGGATGGTGCCATATTCTTGGTCGAA
TAGTCAATGCATTCCTGTTGAAC