Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0360100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:11053048:11057745:-1 gene:Os10g0360100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter protein. (Os10t0360100-01);Conserved hypothetical protein. (Os10t0360100-02)
Sequence	ATGGGAGAAGAGAAGCAGAATGACGAGAGGAAGAACAAGTACGCCGTCGGGTGCTCCATC ATCGGCTCCATCATCTCGGTCCTCATGGGCTATGACACTGGTGTGATGAGTGGGGCGATG CTGTTCATCAAGGAGGACCTGAAGACGAACGACACGCAGGTGCAGGTCCTCGCCGGGATC CTCAACGTGTGCGCGCTCGTCGGCTCCCTCACCGCCGGCCGCGTCTCCGACTGCGTCGGC CGCCGCCTCACCATCTCCCTCGCCGCCTGCATCTTCCTCGTGGGCTCCGTCCTCATGGGC CTCGCGCCCAACTTCGCCACGCTCCTCGCCGGCCGCTGCGTCGCCGGCGTCGGCGTCGGC TACGCGCTCATGATTGCGCCGGTGTACGCCGCCGAGATCGCCTCCGCCGACATCCGCGGC TCGCTCACCTCGCTCCCGGAGATCTGCATCAGCTTCGGGATACTCATCGGCTACGTGGCC AACTACCTGCTCGCCAAGCTGCCGCTGGTGTACGGGTGGCGCGCCATGCTCGGCCTCGGC GCGCTCCCGAGCGCCGCGCTCGCGCTCGGCGTGCTCGCCATGCCCGAGTCCCCGCGGTGG CTCGTCGTCCAGGGCCGCGCCGAGGAGGCGCTCTCCGTGCTCCGCCGCGTGTGCGACAGG CCCAGCGAGGCCGACGCGCGGCTCGCGGAGATCAAGGCCGCGGCGGGGCTCGCCGACGAC GACGGCGCCGCCGCCAACGCGGGCAGCGGCGGCAAGGGCGTGTGGAGGGAGCTGTTCCTG CACCCGACGCCGCCGGTGCGGCGCATCGTCATCGCCGCCCTGGGGATCCACTTCTTCCAG CACCTCACCGGCATCGAGGCCGTGGTGCTCTACAGCCCGCGCATCTTCAAGGCGGCCGGC ATCGCCAGCCGCAACTCGGTGCTCGCTGCGACCATCGGCGTGGGCGTCACCAAGACGGCG TTCATCCTCACCGCCATCCTCCTCGTCGACCGCATAGGCCGGCGGCCGCTCTACCTGTCA AGCCTCGCCGGCATCATCGCCTCGCTCGCCTGCCTCGGCATGGGCCTCACCGTCATCGAG CGGTCGCCGCCGCACCACTCGCCGGCGTGGGCCGTCGTGCTCGCCATCGCCACCGTGTTC ACCTTCGTCGCCTCCTTCTCCATCGGCGTCGGGCCGATCACCTGGGCCTACAGCTCGGAG GTGTACCCGCTCCGCCTCCGCGCGCAGGGCGCCAGCGTCGGCGTCGCCATCAACCGCGTG ATGAACGCCGGCGTGTCCATGACGTTCGTGTCGCTCTACAAGGCCATCACCATCGGCGGC GCCTTCTTCCTCTTCGCCGGGCTCGCCGTCGCCGCCGCCACGTTCTTCTACCTCCTGTGC CCGGAGACGCAGGGCAAGCCGCTGGAGGAGATCGAGGAGGTGTTCAGCCAGGGGTGGCGC GCGCGGCGCCGGGCGTCGGCGGCGGCCGTCGAGATGCCGGCCTCCGGCGGCGGCGGCGGC GGCGGCGCCCCGATGGCGTAG

Peptide Sequence

PEP ID	Os10t0360100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:11053048:11057745:-1 gene:Os10g0360100 transcript:Os10t0360100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter protein. (Os10t0360100-01);Conserved hypothetical protein. (Os10t0360100-02)
Sequence	MGEEKQNDERKNKYAVGCSIIGSIISVLMGYDTGVMSGAMLFIKEDLKTNDTQVQVLAGI LNVCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNFATLLAGRCVAGVGVG YALMIAPVYAAEIASADIRGSLTSLPEICISFGILIGYVANYLLAKLPLVYGWRAMLGLG ALPSAALALGVLAMPESPRWLVVQGRAEEALSVLRRVCDRPSEADARLAEIKAAAGLADD DGAAANAGSGGKGVWRELFLHPTPPVRRIVIAALGIHFFQHLTGIEAVVLYSPRIFKAAG IASRNSVLAATIGVGVTKTAFILTAILLVDRIGRRPLYLSSLAGIIASLACLGMGLTVIE RSPPHHSPAWAVVLAIATVFTFVASFSIGVGPITWAYSSEVYPLRLRAQGASVGVAINRV MNAGVSMTFVSLYKAITIGGAFFLFAGLAVAAATFFYLLCPETQGKPLEEIEEVFSQGWR ARRRASAAAVEMPASGGGGGGGAPMA

Transcript Sequence

Transcript ID	Os10t0360100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:11053048:11057745:-1 gene:Os10g0360100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sugar transporter protein. (Os10t0360100-01);Conserved hypothetical protein. (Os10t0360100-02)
Sequence	GACACATCGATATTATCCAAACACCATATAAACCTTTCTCACCTTCCGGATTCCGGCCAT CTTCGTTTCTCGTCTTCGCCGGCGGCCGCCGCATTTCTGATCGGCCGATATATATCGGAT CTTCAGACTGGTCGCAGCAGCTCGTGTGTGATTGAGAAGTACACAAGGAGAAGAAGGAGA AGACGACGCAGCTGCCATGGGAGAAGAGAAGCAGAATGACGAGAGGAAGAACAAGTACGC CGTCGGGTGCTCCATCATCGGCTCCATCATCTCGGTCCTCATGGGCTATGACACTGGTGT GATGAGTGGGGCGATGCTGTTCATCAAGGAGGACCTGAAGACGAACGACACGCAGGTGCA GGTCCTCGCCGGGATCCTCAACGTGTGCGCGCTCGTCGGCTCCCTCACCGCCGGCCGCGT CTCCGACTGCGTCGGCCGCCGCCTCACCATCTCCCTCGCCGCCTGCATCTTCCTCGTGGG CTCCGTCCTCATGGGCCTCGCGCCCAACTTCGCCACGCTCCTCGCCGGCCGCTGCGTCGC CGGCGTCGGCGTCGGCTACGCGCTCATGATTGCGCCGGTGTACGCCGCCGAGATCGCCTC CGCCGACATCCGCGGCTCGCTCACCTCGCTCCCGGAGATCTGCATCAGCTTCGGGATACT CATCGGCTACGTGGCCAACTACCTGCTCGCCAAGCTGCCGCTGGTGTACGGGTGGCGCGC CATGCTCGGCCTCGGCGCGCTCCCGAGCGCCGCGCTCGCGCTCGGCGTGCTCGCCATGCC CGAGTCCCCGCGGTGGCTCGTCGTCCAGGGCCGCGCCGAGGAGGCGCTCTCCGTGCTCCG CCGCGTGTGCGACAGGCCCAGCGAGGCCGACGCGCGGCTCGCGGAGATCAAGGCCGCGGC GGGGCTCGCCGACGACGACGGCGCCGCCGCCAACGCGGGCAGCGGCGGCAAGGGCGTGTG GAGGGAGCTGTTCCTGCACCCGACGCCGCCGGTGCGGCGCATCGTCATCGCCGCCCTGGG GATCCACTTCTTCCAGCACCTCACCGGCATCGAGGCCGTGGTGCTCTACAGCCCGCGCAT CTTCAAGGCGGCCGGCATCGCCAGCCGCAACTCGGTGCTCGCTGCGACCATCGGCGTGGG CGTCACCAAGACGGCGTTCATCCTCACCGCCATCCTCCTCGTCGACCGCATAGGCCGGCG GCCGCTCTACCTGTCAAGCCTCGCCGGCATCATCGCCTCGCTCGCCTGCCTCGGCATGGG CCTCACCGTCATCGAGCGGTCGCCGCCGCACCACTCGCCGGCGTGGGCCGTCGTGCTCGC CATCGCCACCGTGTTCACCTTCGTCGCCTCCTTCTCCATCGGCGTCGGGCCGATCACCTG GGCCTACAGCTCGGAGGTGTACCCGCTCCGCCTCCGCGCGCAGGGCGCCAGCGTCGGCGT CGCCATCAACCGCGTGATGAACGCCGGCGTGTCCATGACGTTCGTGTCGCTCTACAAGGC CATCACCATCGGCGGCGCCTTCTTCCTCTTCGCCGGGCTCGCCGTCGCCGCCGCCACGTT CTTCTACCTCCTGTGCCCGGAGACGCAGGGCAAGCCGCTGGAGGAGATCGAGGAGGTGTT CAGCCAGGGGTGGCGCGCGCGGCGCCGGGCGTCGGCGGCGGCCGTCGAGATGCCGGCCTC CGGCGGCGGCGGCGGCGGCGGCGCCCCGATGGCGTAGTGCGAAGTGCACCGCGGTGCGCG TGCGTGAACAAAGTGCAACGCACGCGTGTGGATGACGTGGAAGTGTTTGTCACTTGGGGA AAAGAACGAATATTCGCTAGCTAGCTAGTGGTACAGATGGCTAGAGATTGAAATGGAAGG GACCTGATACTACTACTGTTGCATTTGTAGGAAACGACTACTAGCTAACAATGTCATTCT GGTGTCGTGTGGTGTTTAGAAAAAACAAAATCGTTGAAATACAGTAAAAAAAATTAAGAA AATAAAAATTTGTGCTAC