Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0358700-03
CDS Infomation	cds chromosome:IRGSP-1.0:10:10992893:10997360:-1 gene:Os10g0358700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0358700-01);Pentatricopeptide repeat domain containing protein. (Os10t0358700-02);Pentatricopeptide repeat domain containing protein. (Os10t0358700-03)
Sequence	ATGCTCCGCCGCAGCCGCCACTTCCTCCCACCCAGACCCCGCCGCCGGCCGAGACCTCGC CGCGAGGCCCCCGCCGCCGAGCCGCCCACCCCGACCTACACCCGCGACGTCGTCCGCCGC GTCGACGCCATCCTCCGCGGCCACCCCTGGTCGGCGGCGCGGCCGCTCCTCCTCTCCCTC CCGGGCCTCGCCTGGGACTCCCACACCGTCGCGCGCGTCCTCAAGGCGCACCCGCCTCTC CACAAGGCCTTCCTCTTCTTCCGCCTCGCCGCCGGCGCAGGCGGCGGGTTCCGCCACGAC CGCTTCACCTACACCTCCATGCTCCACCTCCTCGGCGAGGCCGGCCGCGTGCCGGCCATG ATGCGCCTCCTCGCCGAGATGCTCCGCGCGGGGGTGGACCCCGACGCCGCCACCTTCACC ACGGTCATGCACTGGCTGGCGCACGCCGGGGACGTCGACGCCGCGATGCGGGTGTGGGAG GAGATGCGCGCGCGGAAGGGGAAGTGTCGGCCCACCCTCGTGAGCTACACGGCGTGCGTG AAGATCCTGTTCGACGCCGGGAGGCCTGCGGAGGCCAGGGAGGTGTTCCAGGAGATGGTG GCCGAGGGACTGCGGCCCAGCTGCAAGACGTACACGGTGCTCATCGAGCATCTCGCGAAC GTAGGGAAATTTGAAGCTACTATGGAAATTATGGACAAGATGCAAGAAGCTGGTGTAGAA CCAGATAAAGCACTCTGTAATATTCTAGTTCAGAAATGCTCCAGGGCTGGTGAGACATCA GTGATGACCCGAATTCTTCAATACATGAAGGAAAATTTCATCGTGCTTCGCCGACCTATA TTTTTGGAAGCACTTGAAGCTCTAAAAGCTAATGGTGAGAGTGACAATCTTCTTCGGGAA GTGAATCCGCATCTTGCATTTGAAGGCATCGAATGTGACCCAGCATTTACTGATCTAGGC TACATTACTGTCAGGAGTACGATCCTGTACCTTTTGGCTTCTAGAAACTGGTCCGCCGTA GAACACATGATAAATGAAATGACCCCCAAGAATATCAAGGTTGAATCACATATCCTCTCT GACATTATTCAAGCAAGCTGTGCAAACTGCAGACCATCATGTGGGCTTGCAGTTCTGCGT TACAGTCTAAGAATAGGCAATGAACTTGATAGATCTGCATATGGCAGCCTTCTTGGTCAT TACATCAGAAATGGTTCATTCGATTTGGTGTTTGAGATCGTTGAAATATTGATTAAATCT GGCTGCAATCTTGGGACATATCTATCATCTATATTAATAATAAAACTGGCTTGTGCTGGG CATTCTTCAACCGCAGTGCGCATTTTTGGATTATTGACTACAGACAAGAATGTTGTTACG TACACTGCCCTTATGAGTGCCTATTTTCAAGATGGGAAAGTTGATAAGGCTCTCCAACTA TTCTTGCAAATGAGTGCTAATGGAGTATCTGCATGCCCAGGTACATATGAAGTACTGATA CATGGATTACAAATGGCTGGGCGGAAACAGGAATCTGAACATTACCGAAGAGAGAGAATG GAGATGCAATGGCATCTTCAGTATCGCAATGAGCATTCCCCTGAAGATAGCTTATGTAAC CATCTGTTTTGTGATTTTCATGGTTAG

Peptide Sequence

PEP ID	Os10t0358700-03
PEP Infomation	pep chromosome:IRGSP-1.0:10:10992893:10997360:-1 gene:Os10g0358700 transcript:Os10t0358700-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0358700-01);Pentatricopeptide repeat domain containing protein. (Os10t0358700-02);Pentatricopeptide repeat domain containing protein. (Os10t0358700-03)
Sequence	MLRRSRHFLPPRPRRRPRPRREAPAAEPPTPTYTRDVVRRVDAILRGHPWSAARPLLLSL PGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGAGGGFRHDRFTYTSMLHLLGEAGRVPAM MRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDAAMRVWEEMRARKGKCRPTLVSYTACV KILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLANVGKFEATMEIMDKMQEAGVE PDKALCNILVQKCSRAGETSVMTRILQYMKENFIVLRRPIFLEALEALKANGESDNLLRE VNPHLAFEGIECDPAFTDLGYITVRSTILYLLASRNWSAVEHMINEMTPKNIKVESHILS DIIQASCANCRPSCGLAVLRYSLRIGNELDRSAYGSLLGHYIRNGSFDLVFEIVEILIKS GCNLGTYLSSILIIKLACAGHSSTAVRIFGLLTTDKNVVTYTALMSAYFQDGKVDKALQL FLQMSANGVSACPGTYEVLIHGLQMAGRKQESEHYRRERMEMQWHLQYRNEHSPEDSLCN HLFCDFHG

Transcript Sequence

Transcript ID	Os10t0358700-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10992893:10997360:-1 gene:Os10g0358700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os10t0358700-01);Pentatricopeptide repeat domain containing protein. (Os10t0358700-02);Pentatricopeptide repeat domain containing protein. (Os10t0358700-03)
Sequence	ATGCTCCGCCGCAGCCGCCACTTCCTCCCACCCAGACCCCGCCGCCGGCCGAGACCTCGC CGCGAGGCCCCCGCCGCCGAGCCGCCCACCCCGACCTACACCCGCGACGTCGTCCGCCGC GTCGACGCCATCCTCCGCGGCCACCCCTGGTCGGCGGCGCGGCCGCTCCTCCTCTCCCTC CCGGGCCTCGCCTGGGACTCCCACACCGTCGCGCGCGTCCTCAAGGCGCACCCGCCTCTC CACAAGGCCTTCCTCTTCTTCCGCCTCGCCGCCGGCGCAGGCGGCGGGTTCCGCCACGAC CGCTTCACCTACACCTCCATGCTCCACCTCCTCGGCGAGGCCGGCCGCGTGCCGGCCATG ATGCGCCTCCTCGCCGAGATGCTCCGCGCGGGGGTGGACCCCGACGCCGCCACCTTCACC ACGGTCATGCACTGGCTGGCGCACGCCGGGGACGTCGACGCCGCGATGCGGGTGTGGGAG GAGATGCGCGCGCGGAAGGGGAAGTGTCGGCCCACCCTCGTGAGCTACACGGCGTGCGTG AAGATCCTGTTCGACGCCGGGAGGCCTGCGGAGGCCAGGGAGGTGTTCCAGGAGATGGTG GCCGAGGGACTGCGGCCCAGCTGCAAGACGTACACGGTGCTCATCGAGCATCTCGCGAAC GTAGGGAAATTTGAAGCTACTATGGAAATTATGGACAAGATGCAAGAAGCTGGTGTAGAA CCAGATAAAGCACTCTGTAATATTCTAGTTCAGAAATGCTCCAGGGCTGGTGAGACATCA GTGATGACCCGAATTCTTCAATACATGAAGGAAAATTTCATCGTGCTTCGCCGACCTATA TTTTTGGAAGCACTTGAAGCTCTAAAAGCTAATGGTGAGAGTGACAATCTTCTTCGGGAA GTGAATCCGCATCTTGCATTTGAAGGCATCGAATGTGACCCAGCATTTACTGATCTAGGC TACATTACTGTCAGGAGTACGATCCTGTACCTTTTGGCTTCTAGAAACTGGTCCGCCGTA GAACACATGATAAATGAAATGACCCCCAAGAATATCAAGGTTGAATCACATATCCTCTCT GACATTATTCAAGCAAGCTGTGCAAACTGCAGACCATCATGTGGGCTTGCAGTTCTGCGT TACAGTCTAAGAATAGGCAATGAACTTGATAGATCTGCATATGGCAGCCTTCTTGGTCAT TACATCAGAAATGGTTCATTCGATTTGGTGTTTGAGATCGTTGAAATATTGATTAAATCT GGCTGCAATCTTGGGACATATCTATCATCTATATTAATAATAAAACTGGCTTGTGCTGGG CATTCTTCAACCGCAGTGCGCATTTTTGGATTATTGACTACAGACAAGAATGTTGTTACG TACACTGCCCTTATGAGTGCCTATTTTCAAGATGGGAAAGTTGATAAGGCTCTCCAACTA TTCTTGCAAATGAGTGCTAATGGAGTATCTGCATGCCCAGGTACATATGAAGTACTGATA CATGGATTACAAATGGCTGGGCGGAAACAGGAATCTGAACATTACCGAAGAGAGAGAATG GAGATGCAATGGCATCTTCAGTATCGCAATGAGCATTCCCCTGAAGATAGCTTATGTAAC CATCTGTTTTGTGATTTTCATGGTTAGAAGATGGTCCAAAATCTTCATCTTTCATTAGCT GAATCCTTCCAGCACCTATTGCTGCCTGAACATGATGATATTGACACACAGTAACTCATA ATGAGGTCTGGACCGTTCATTCGGTACACAAAATCAAGTACTGGCTACATACTATCCACC AGTTTTTGTGCTTTTGAGAGCATATTATTGATGAATTACTGCATTGTAGATGAATATGTC AAGATGTCATTAAATTATGGAGTCCATCTAGGATCACCATTATGTAACACAAATGCTCTT TCTGAGCATCTTCACGAGCATGACTGCACAAGCTGCTACACGGGCTGTTCACTTTTCCAT TTCAATGTATTGCTGTTGTCATTCATCAGTAGACAACTTCTAAAGGTGCACATGGTGAAG ACTAGTGCTGCCACTTTTATCAAACCTTTACTCAGCAGCCCCTATACAAACTCTCTATTG CTCTTGGCTGCTATTGCAAAAAGGTTTCAC