Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0358600-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:10988339:10992663:1 gene:Os10g0358600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.4 protein. (Os10t0358600-01)
Sequence

ATGATTGCGGCGGTCGGCCGGGGACCGGAGGGATGGGGGGAGGACGAGATGTCCGTGCTA
CCGCGGCATACCAAGGTGGTGGTCACCGGCAACAACCGCACCAAGTCGGTGCTCGTTGGC
CTCCATGGCGTCGTCAAGAAGGCCGTCGGGCTCGGGGGATGGCATTGGCTGGTGCTTACC
AATGGCATAGAGGTAAAGCTGCAAAGGAATGCTTTAAGTGTGATTGAACCTCCAACTGGC
AATGAGGATGATGATAAGTTTGACTGTGAGAACATGCAGTGGAATAGTTCAGATCTGGCA
TCCGATGACGCACAATCACCAAAGCCACAGAGGTCAAGGAGCAGGCAGCATAGAGGGTTC
CAGACCAAATCCTTCAGCCGCTCCATGTCTTGTGATTCCCACTCCAAGGCGTCATTTTCT
TCCTCCTCAAGGGCTCACACGAAAGTTGACCTGAGCAAGCTGGAAATGACTGCATTATGG
AGATATTGGCGTCACTTCAATCTCGATGCTAGCCCTAACCCATCCAGGGAGCAGTTAGTG
GATGCTGTCCAGAGGCACTTTGTGTCGCAGCAATTGGATGAGTTGCAGGTCATCGTTGGT
TTCGTGCAGGCTGCAAAGAGGCTGAAGACAAACGTGAAAGTGGCCTGA

Peptide Sequence

PEP ID

Os10t0358600-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:10988339:10992663:1 gene:Os10g0358600 transcript:Os10t0358600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.4 protein. (Os10t0358600-01)
Sequence

MIAAVGRGPEGWGEDEMSVLPRHTKVVVTGNNRTKSVLVGLHGVVKKAVGLGGWHWLVLT
NGIEVKLQRNALSVIEPPTGNEDDDKFDCENMQWNSSDLASDDAQSPKPQRSRSRQHRGF
QTKSFSRSMSCDSHSKASFSSSSRAHTKVDLSKLEMTALWRYWRHFNLDASPNPSREQLV
DAVQRHFVSQQLDELQVIVGFVQAAKRLKTNVKVA

Transcript Sequence

Transcript ID

Os10t0358600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:10988339:10992663:1 gene:Os10g0358600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0136O08-OSIGBa0153H12.4 protein. (Os10t0358600-01)
Sequence

GCTCGCCGCTCCCATTCCCTGCGGATTCTATCTCTCTCTTCTCCAATTCGCGCGGGCTCG
GGCGCCGCATTGGCGCGATCTCCGGATTGTGAGGGGGTTTGTTGTCGAATTGTTGGGGGA
ATTGTGGGTGCTGGTTGGGCCGATCTCGTCGCTGGAGCAGGAGGGGTTTCAGGATCGGTG
CGGTTCTGTGTGGTTATTGGGGATTGTTGTGATCAAGATTCGGCTTCTTGCGGTATGGCG
AGGATGGGCGAATTGAGGGGGAATTGGAGCGAATCTTGGGTCCCCAATGCTTGATCTCTG
ATTCTTGGGAAGTACATTCTCCAGATTGGTGCGATCCCGGCGTGAATTTTGGGGAATTTC
TCGGATCAAGAATTTGGCCAACTGTCCCTGCAAGAAACAGGGGAAATTGGGGGCCAATCT
GGTGCCAATTGGGGAGTAATTTGGAGGTGGAGGCGATCGATCCGGCCGGGGAGATGATTG
CGGCGGTCGGCCGGGGACCGGAGGGATGGGGGGAGGACGAGATGTCCGTGCTACCGCGGC
ATACCAAGGTGGTGGTCACCGGCAACAACCGCACCAAGTCGGTGCTCGTTGGCCTCCATG
GCGTCGTCAAGAAGGCCGTCGGGCTCGGGGGATGGCATTGGCTGGTGCTTACCAATGGCA
TAGAGGTAAAGCTGCAAAGGAATGCTTTAAGTGTGATTGAACCTCCAACTGGCAATGAGG
ATGATGATAAGTTTGACTGTGAGAACATGCAGTGGAATAGTTCAGATCTGGCATCCGATG
ACGCACAATCACCAAAGCCACAGAGGTCAAGGAGCAGGCAGCATAGAGGGTTCCAGACCA
AATCCTTCAGCCGCTCCATGTCTTGTGATTCCCACTCCAAGGCGTCATTTTCTTCCTCCT
CAAGGGCTCACACGAAAGTTGACCTGAGCAAGCTGGAAATGACTGCATTATGGAGATATT
GGCGTCACTTCAATCTCGATGCTAGCCCTAACCCATCCAGGGAGCAGTTAGTGGATGCTG
TCCAGAGGCACTTTGTGTCGCAGCAATTGGATGAGTTGCAGGTCATCGTTGGTTTCGTGC
AGGCTGCAAAGAGGCTGAAGACAAACGTGAAAGTGGCCTGATGGAGAGAACTGGTTGTCT
TCAACTAACAGATTCAAGATAGGATGCAACATGTTTGGTCAATGTTGGCCATGCTATGTA
ATATATGTGCATGAGGCTGCTTAGATTTGGATGGCTAGATTAATGCACAACTAGAACTCT
CTTGGTTCATCGTCTTTATGTTAGCTCCCTGTGATGTAGATATGCAGTATGCTGGCAAAG
GATCTTGCAACCTCTAGCTCAGTTATCTCCTGCTGACTGGATGTGAATTGACATGACAAA
TTATAAATCAGCTTCTCATATTTACCC